FFCP PHASE1:Hg19::chr10:89420706..89420712,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9060 | |EntrezGene=9060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8604 | |HGNC=8604 | ||
|TSSclassifier=strong | |||
|UniProt=E7ER89 | |UniProt=E7ER89 | ||
|association_with_transcript=0bp_to_ENST00000427144,uc009xtg.1_5end | |association_with_transcript=0bp_to_ENST00000427144,uc009xtg.1_5end | ||
|cluster_id=chr10:89420706..89420712,+ | |||
|description=CAGE_peak_5_at_PAPSS2_5end | |description=CAGE_peak_5_at_PAPSS2_5end | ||
|id=chr10:89420706..89420712,+ | |id=chr10:89420706..89420712,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.58e-17!180;CL:0000077!2.02e-12!19;CL:0002494!1.43e-11!16;CL:0000187!1.91e-11!54;CL:0000680!2.61e-11!57;CL:0000056!2.61e-11!57;CL:0000355!2.61e-11!57;CL:0000057!6.38e-11!75;CL:0000192!1.10e-10!42;CL:0000514!1.10e-10!42;CL:0000183!2.05e-10!59;CL:0000359!3.44e-10!32;CL:0000222!2.22e-09!119;CL:0000393!2.75e-09!60;CL:0000211!2.75e-09!60;CL:0000048!1.09e-08!430;CL:0000723!4.08e-08!436;CL:0000034!1.15e-07!444 | |ontology_enrichment_celltype=CL:0000055!2.58e-17!180;CL:0000077!2.02e-12!19;CL:0002494!1.43e-11!16;CL:0000187!1.91e-11!54;CL:0000680!2.61e-11!57;CL:0000056!2.61e-11!57;CL:0000355!2.61e-11!57;CL:0000057!6.38e-11!75;CL:0000192!1.10e-10!42;CL:0000514!1.10e-10!42;CL:0000183!2.05e-10!59;CL:0000359!3.44e-10!32;CL:0000222!2.22e-09!119;CL:0000393!2.75e-09!60;CL:0000211!2.75e-09!60;CL:0000048!1.09e-08!430;CL:0000723!4.08e-08!436;CL:0000034!1.15e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002622;1.60e-11;3!CL:0000077;3.86e-11;19!CL:0000138;1.60e-10;6!CL:0000359;1.54e-08;32!CL:0001014;6.82e-08;2!CL:0002588;6.82e-08;2!CL:0001016;6.82e-08;2!CL:0000499;3.44e-07;28!CL:0000153;5.28e-07;9!CL:0000447;5.28e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,2.11e-11,3;CL:0000077,3.63e-11,19;CL:0000058,1.23e-10,6;CL:0000138,1.23e-10,6;CL:0000359,3.40e-09,32;CL:0000192,8.41e-08,43;CL:0000514,8.41e-08,43;CL:0001014,8.47e-08,2;CL:0001016,8.47e-08,2;CL:0002588,1.08e-07,2;CL:0000499,3.01e-07,28;CL:0000153,4.47e-07,9;CL:0000447,4.47e-07,9;CL:0000222,4.92e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.85e-08!14 | |ontology_enrichment_disease=DOID:2394!5.85e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!7.19e-11!61;UBERON:0002036!7.19e-11!61;UBERON:0003082!7.19e-11!61;UBERON:0002385!3.50e-10!63;UBERON:0001015!3.50e-10!63;UBERON:0000383!3.50e-10!63;UBERON:0004872!1.78e-08!84;UBERON:0004290!3.90e-08!70;UBERON:0001637!1.14e-07!42;UBERON:0003509!1.14e-07!42;UBERON:0004572!1.14e-07!42;UBERON:0000948!2.28e-07!24;UBERON:0005498!2.28e-07!24;UBERON:0004140!2.28e-07!24;UBERON:0009881!2.28e-07!24;UBERON:0004141!2.28e-07!24;UBERON:0003084!2.28e-07!24;UBERON:0007005!2.28e-07!24;UBERON:0004139!2.28e-07!24;UBERON:0004291!2.28e-07!24;UBERON:0003914!2.37e-07!118;UBERON:0000490!3.33e-07!138;UBERON:0005256!7.36e-07!143;UBERON:0000914!7.46e-07!83;UBERON:0002329!7.46e-07!83;UBERON:0003077!7.46e-07!83;UBERON:0003059!7.46e-07!83;UBERON:0007282!7.46e-07!83;UBERON:0009618!7.46e-07!83;UBERON:0007285!7.46e-07!83 | |ontology_enrichment_uberon=UBERON:0001134!7.19e-11!61;UBERON:0002036!7.19e-11!61;UBERON:0003082!7.19e-11!61;UBERON:0002385!3.50e-10!63;UBERON:0001015!3.50e-10!63;UBERON:0000383!3.50e-10!63;UBERON:0004872!1.78e-08!84;UBERON:0004290!3.90e-08!70;UBERON:0001637!1.14e-07!42;UBERON:0003509!1.14e-07!42;UBERON:0004572!1.14e-07!42;UBERON:0000948!2.28e-07!24;UBERON:0005498!2.28e-07!24;UBERON:0004140!2.28e-07!24;UBERON:0009881!2.28e-07!24;UBERON:0004141!2.28e-07!24;UBERON:0003084!2.28e-07!24;UBERON:0007005!2.28e-07!24;UBERON:0004139!2.28e-07!24;UBERON:0004291!2.28e-07!24;UBERON:0003914!2.37e-07!118;UBERON:0000490!3.33e-07!138;UBERON:0005256!7.36e-07!143;UBERON:0000914!7.46e-07!83;UBERON:0002329!7.46e-07!83;UBERON:0003077!7.46e-07!83;UBERON:0003059!7.46e-07!83;UBERON:0007282!7.46e-07!83;UBERON:0009618!7.46e-07!83;UBERON:0007285!7.46e-07!83 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,6.75e-10,122;UBERON:0000490,4.60e-08,148;UBERON:0003104,4.71e-07,160;UBERON:0009142,4.71e-07,160;UBERON:0003498,6.12e-07,5;UBERON:0005985,6.12e-07,5;UBERON:0001134,7.81e-07,62;UBERON:0002036,7.81e-07,62;UBERON:0003082,7.81e-07,62 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,2.89151321907653,0.50133791063589,2.60723734129483,3.9764297352555,2.43317435151318,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,1.05927344650575,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,0.49333509683432,0.622422070799533,0.808264032418128,0.817309515567294,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0,0.438977620880838,0,0,1.24775401476023,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0,0.323292113637624,0,0.302256294682921,0.508681776931463,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,3.80265104465493,0.982827216677626,2.36315962672562,0,0,1.20097467208968,0,0,0,0,0,1.03993478527958,0,0,0.939269553886573,0,0,0,2.37061319387782,0.858486162094873,0,0,0,0,0,0,0,0,0,0.985326475791887,0.44024217006613,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0.22001485746285,1.16344544182,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,1.42977993658148,0.542621605391443,0,0,0.355391948742546,0.791951872933429,2.71295439353627,0.871533458600294,1.59956785891291,0,0,0,0.718874566474748,0,0,1.15825045334063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.415941723061614,0.356857977594324,1.41932173530541,0.819989904948992,0.300946099727719,0,1.03473071292505,0,0,0.347534457872331,0.391602314925481,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.256278298511402,0.511707249066704,0,2.96836132889982,0.462629081407967,0.355123450626254,0.739144404124282,0,0.581051892299796,0,0,0,3.09999010044438,1.27463817604702,1.31124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,1.75169719801128,0,0,0,0,4.82051789532479,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0.929691098594572,2.20368642781448,0,0.308033580176089,1.59691809095107,0,0,0.715624433709956,0.744316738719335,0,1.33441135746677,0.255897791311334,0,0,0.78494864019923,0.539617372749944,0,0.353437207037059,1.81964233415984,1.58510321173008,0.842516912477962,0,0.487426979262569,3.16950440270266,0.818999468447914,1.83827061539827,0,0,0,0.876901770507525,0,0,1.42037263873893,0.30982349809975,0.563391205064483,1.14729081763241,1.27723753317057,1.426684205925,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,2.16489906109302,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0,0.343189995723929,0,0.124252535565433,0,0.135904206073614,0,0.611989305817931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492137407573744,0,0,0,0,0,0,1.1248694577575,1.5476039091159,0,0,0.157611414598396,0,0,1.07572403599707,0,0,0,0,0,0,0,0,0,2.21504428321048,0.339936274560377,1.61207457045891,0,0.129282956361551,0,0,0,0.533937062838473,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0.919036730290385,0,0,0,0.122026264901963,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.378806010550178,0,0,3.20376095755693,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0.449803112163605,0.310525913752519,1.24411862352257,0.53168342911599,0.521745061811734,0.601030435988874,3.04644169735036,0,0.363697318405119,0.214821114084977,0.464033759878494,2.3885753321917,0,1.71697852591396,0.336749488765919,0,0.192619830407303,0.428883182749851,0,1.81364740409818,2.08370226891451,0.97894681802587,0.895444205407437,0,7.45565768567604,1.41351316756705,0.964570191354574,1.01365464391844,0,0.690860683462397,0.911579868532147,0,0,0,0,0.655219697692825,0.737318726261158,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,1.1441462864015,0,0,0.150420656698515,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.078493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|phase1_expression=0.363356758541113,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,2.89151321907653,0.50133791063589,2.60723734129483,3.9764297352555,2.43317435151318,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,1.05927344650575,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,0.49333509683432,0.622422070799533,0.808264032418128,0.817309515567294,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0,0.438977620880838,0,0,1.24775401476023,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0,0.323292113637624,0,0.302256294682921,0.508681776931463,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,3.80265104465493,0.982827216677626,2.36315962672562,0,0,1.20097467208968,0,0,0,0,0,1.03993478527958,0,0,0.939269553886573,0,0,0,2.37061319387782,0.858486162094873,0,0,0,0,0,0,0,0,0,0.985326475791887,0.44024217006613,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0.22001485746285,1.16344544182,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,1.42977993658148,0.542621605391443,0,0,0.355391948742546,0.791951872933429,2.71295439353627,0.871533458600294,1.59956785891291,0,0,0,0.718874566474748,0,0,1.15825045334063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.415941723061614,0.356857977594324,1.41932173530541,0.819989904948992,0.300946099727719,0,1.03473071292505,0,0,0.347534457872331,0.391602314925481,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.256278298511402,0.511707249066704,0,2.96836132889982,0.462629081407967,0.355123450626254,0.739144404124282,0,0.581051892299796,0,0,0,3.09999010044438,1.27463817604702,1.31124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,1.75169719801128,0,0,0,0,4.82051789532479,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0.929691098594572,2.20368642781448,0,0.308033580176089,1.59691809095107,0,0,0.715624433709956,0.744316738719335,0,1.33441135746677,0.255897791311334,0,0,0.78494864019923,0.539617372749944,0,0.353437207037059,1.81964233415984,1.58510321173008,0.842516912477962,0,0.487426979262569,3.16950440270266,0.818999468447914,1.83827061539827,0,0,0,0.876901770507525,0,0,1.42037263873893,0.30982349809975,0.563391205064483,1.14729081763241,1.27723753317057,1.426684205925,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,2.16489906109302,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0,0.343189995723929,0,0.124252535565433,0,0.135904206073614,0,0.611989305817931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492137407573744,0,0,0,0,0,0,1.1248694577575,1.5476039091159,0,0,0.157611414598396,0,0,1.07572403599707,0,0,0,0,0,0,0,0,0,2.21504428321048,0.339936274560377,1.61207457045891,0,0.129282956361551,0,0,0,0.533937062838473,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0.919036730290385,0,0,0,0.122026264901963,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.378806010550178,0,0,3.20376095755693,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0.449803112163605,0.310525913752519,1.24411862352257,0.53168342911599,0.521745061811734,0.601030435988874,3.04644169735036,0,0.363697318405119,0.214821114084977,0.464033759878494,2.3885753321917,0,1.71697852591396,0.336749488765919,0,0.192619830407303,0.428883182749851,0,1.81364740409818,2.08370226891451,0.97894681802587,0.895444205407437,0,7.45565768567604,1.41351316756705,0.964570191354574,1.01365464391844,0,0.690860683462397,0.911579868532147,0,0,0,0,0.655219697692825,0.737318726261158,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,1.1441462864015,0,0,0.150420656698515,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.078493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| ||
|short_description=p5@PAPSS2 | |short_description=p5@PAPSS2 | ||
}} | }} |
Latest revision as of 18:46, 19 September 2015
Short description: | p5@PAPSS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PAPSS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000427144, uc009xtg.1_5end |
EntrezGene: | PAPSS2 |
HGNC: | 8604 |
UniProt: | E7ER89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 2.11e-11 | 3 |
mesothelial cell | 3.63e-11 | 19 |
chondroblast | 1.23e-10 | 6 |
chondrocyte | 1.23e-10 | 6 |
vascular associated smooth muscle cell | 3.40e-09 | 32 |
smooth muscle cell | 8.41e-08 | 43 |
smooth muscle myoblast | 8.41e-08 | 43 |
CD1a-positive Langerhans cell | 8.47e-08 | 2 |
immature CD1a-positive Langerhans cell | 8.47e-08 | 2 |
smooth muscle cell of the umbilical vein | 1.08e-07 | 2 |
stromal cell | 3.01e-07 | 28 |
GAG secreting cell | 4.47e-07 | 9 |
carbohydrate secreting cell | 4.47e-07 | 9 |
mesodermal cell | 4.92e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 6.75e-10 | 122 |
unilaminar epithelium | 4.60e-08 | 148 |
mesenchyme | 4.71e-07 | 160 |
entire embryonic mesenchyme | 4.71e-07 | 160 |
heart blood vessel | 6.12e-07 | 5 |
coronary vessel | 6.12e-07 | 5 |
skeletal muscle tissue | 7.81e-07 | 62 |
striated muscle tissue | 7.81e-07 | 62 |
myotome | 7.81e-07 | 62 |