FFCP PHASE1:Hg19::chr10:22006341..22006345,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:22006341..22006345,+ | |||
|description=CAGE_peak_at_chr10:22006341..22006345,+ | |description=CAGE_peak_at_chr10:22006341..22006345,+ | ||
|id=chr10:22006341..22006345,+ | |id=chr10:22006341..22006345,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.77e-13!235;DOID:14566!6.01e-13!239;DOID:0050687!1.46e-08!143 | |ontology_enrichment_disease=DOID:162!5.77e-13!235;DOID:14566!6.01e-13!239;DOID:0050687!1.46e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.22e-13!57;UBERON:0005068!5.22e-13!57;UBERON:0006241!5.22e-13!57;UBERON:0007135!5.22e-13!57;UBERON:0003080!1.68e-11!42;UBERON:0002780!4.70e-11!41;UBERON:0001890!4.70e-11!41;UBERON:0006240!4.70e-11!41;UBERON:0002616!5.96e-11!59;UBERON:0000955!1.15e-10!69;UBERON:0006238!1.15e-10!69;UBERON:0001893!2.83e-10!34;UBERON:0002020!3.75e-10!34;UBERON:0003528!3.75e-10!34;UBERON:0002791!5.39e-10!33;UBERON:0001869!7.69e-10!32;UBERON:0002346!2.28e-09!90;UBERON:0001017!2.57e-09!82;UBERON:0000073!3.28e-09!94;UBERON:0001016!3.28e-09!94;UBERON:0005743!3.71e-09!86;UBERON:0003075!1.78e-08!86;UBERON:0007284!1.78e-08!86;UBERON:0000956!2.36e-07!25;UBERON:0000203!2.36e-07!25;UBERON:0003056!7.20e-07!61 | |ontology_enrichment_uberon=UBERON:0001049!5.22e-13!57;UBERON:0005068!5.22e-13!57;UBERON:0006241!5.22e-13!57;UBERON:0007135!5.22e-13!57;UBERON:0003080!1.68e-11!42;UBERON:0002780!4.70e-11!41;UBERON:0001890!4.70e-11!41;UBERON:0006240!4.70e-11!41;UBERON:0002616!5.96e-11!59;UBERON:0000955!1.15e-10!69;UBERON:0006238!1.15e-10!69;UBERON:0001893!2.83e-10!34;UBERON:0002020!3.75e-10!34;UBERON:0003528!3.75e-10!34;UBERON:0002791!5.39e-10!33;UBERON:0001869!7.69e-10!32;UBERON:0002346!2.28e-09!90;UBERON:0001017!2.57e-09!82;UBERON:0000073!3.28e-09!94;UBERON:0001016!3.28e-09!94;UBERON:0005743!3.71e-09!86;UBERON:0003075!1.78e-08!86;UBERON:0007284!1.78e-08!86;UBERON:0000956!2.36e-07!25;UBERON:0000203!2.36e-07!25;UBERON:0003056!7.20e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.22e-16;4!UBERON:0010133;1.22e-16;4!UBERON:0001894;1.56e-09;7!UBERON:0000007;3.30e-09;2!UBERON:0001905;3.80e-09;2!UBERON:0002757;3.80e-09;2!UBERON:0010134;3.80e-09;2!UBERON:0005408;3.80e-09;2!UBERON:0001899;3.80e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.74e-16,4;UBERON:0010133,1.74e-16,4;UBERON:0001894,1.91e-09,7;UBERON:0006222,1.91e-09,7;UBERON:0000007,2.22e-09,2;UBERON:0001905,8.03e-09,2;UBERON:0002757,8.03e-09,2;UBERON:0010134,8.03e-09,2;UBERON:0005408,8.03e-09,2;UBERON:0001899,8.03e-09,2;UBERON:0000955,5.30e-08,68;UBERON:0006238,5.30e-08,68;UBERON:0002346,5.40e-08,86;UBERON:0001049,1.26e-07,56;UBERON:0005068,1.26e-07,56;UBERON:0006241,1.26e-07,56;UBERON:0007135,1.26e-07,56;UBERON:0003075,2.15e-07,82;UBERON:0007284,2.15e-07,82;UBERON:0001017,2.19e-07,81;UBERON:0000073,8.80e-07,53;UBERON:0002616,8.80e-07,53 | |||
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| ||
|short_description=p@chr10:22006341..22006345,+ | |short_description=p@chr10:22006341..22006345,+ | ||
}} | }} |
Latest revision as of 12:33, 23 July 2015
Short description: | p@chr10:22006341..22006345, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:22006341..22006345, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 1.74e-16 | 4 |
neuroendocrine gland | 1.74e-16 | 4 |
diencephalon | 1.91e-09 | 7 |
future diencephalon | 1.91e-09 | 7 |
pituitary gland | 2.22e-09 | 2 |
pineal body | 8.03e-09 | 2 |
regional part of epithalamus | 8.03e-09 | 2 |
secretory circumventricular organ | 8.03e-09 | 2 |
circumventricular organ | 8.03e-09 | 2 |
epithalamus | 8.03e-09 | 2 |
brain | 5.30e-08 | 68 |
future brain | 5.30e-08 | 68 |
neurectoderm | 5.40e-08 | 86 |
neural tube | 1.26e-07 | 56 |
neural rod | 1.26e-07 | 56 |
future spinal cord | 1.26e-07 | 56 |
neural keel | 1.26e-07 | 56 |
neural plate | 2.15e-07 | 82 |
presumptive neural plate | 2.15e-07 | 82 |
central nervous system | 2.19e-07 | 81 |
regional part of nervous system | 8.80e-07 | 53 |
regional part of brain | 8.80e-07 | 53 |