FFCP PHASE1:Hg19::chr10:11927715..11927740,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:11927715..11927740,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr10:11927715..11927740,- | |description=CAGE_peak_at_chr10:11927715..11927740,- | ||
|id=chr10:11927715..11927740,- | |id=chr10:11927715..11927740,- | ||
|ontology_enrichment_celltype=CL:0002541!4.35e-20!3;CL:0000039!6.54e-09!7;CL:0000586!6.54e-09!7;CL:0000763!2.92e-08!112;CL:0000049!2.92e-08!112 | |ontology_enrichment_celltype=CL:0002541!4.35e-20!3;CL:0000039!6.54e-09!7;CL:0000586!6.54e-09!7;CL:0000763!2.92e-08!112;CL:0000049!2.92e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0002541;5.91e-20;3!CL:0000039;4.13e-09;7!CL:0000586;4.13e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.37e-20,3;CL:0000763,1.10e-09,108;CL:0000049,1.10e-09,108;CL:0000039,4.04e-09,7;CL:0000586,4.04e-09,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.63e-39!8;DOID:8692!2.67e-32!31;DOID:1240!3.79e-25!39;DOID:2531!1.26e-18!51;DOID:0060083!1.26e-18!51;DOID:1799!1.01e-07!1;DOID:10165!1.01e-07!1;DOID:1798!1.01e-07!1;DOID:8552!1.07e-07!1;DOID:162!1.45e-07!235;DOID:9119!1.80e-07!1;DOID:0050686!2.34e-07!137;DOID:14566!2.53e-07!239 | |ontology_enrichment_disease=DOID:1036!3.63e-39!8;DOID:8692!2.67e-32!31;DOID:1240!3.79e-25!39;DOID:2531!1.26e-18!51;DOID:0060083!1.26e-18!51;DOID:1799!1.01e-07!1;DOID:10165!1.01e-07!1;DOID:1798!1.01e-07!1;DOID:8552!1.07e-07!1;DOID:162!1.45e-07!235;DOID:9119!1.80e-07!1;DOID:0050686!2.34e-07!137;DOID:14566!2.53e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.26e-85;8!DOID:8692;7.98e-36;31!DOID:1240;4.62e-24;39!DOID:1799;3.17e-15;1!DOID:10165;3.17e-15;1!DOID:1798;3.17e-15;1!DOID:2531;9.76e-14;51!DOID:0060083;9.76e-14;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.35e-85,8;DOID:8692,3.82e-36,31;DOID:1240,1.38e-28,39;DOID:2531,1.10e-21,51;DOID:0060083,1.10e-21,51;DOID:1799,3.66e-15,1;DOID:10165,3.66e-15,1;DOID:1798,3.66e-15,1;DOID:0050686,3.10e-09,137;DOID:162,2.24e-07,235;DOID:14566,3.42e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000476!4.35e-20!3;UBERON:0000920!4.35e-20!3;UBERON:0003124!6.57e-15!7;UBERON:0005631!3.68e-11!14;UBERON:0000158!3.68e-11!14;UBERON:0000478!6.26e-09!24;UBERON:0001282!1.58e-07!1;UBERON:0009842!1.58e-07!1;UBERON:0003704!1.58e-07!1;UBERON:0001171!1.58e-07!1;UBERON:0001172!1.58e-07!1 | |ontology_enrichment_uberon=UBERON:0000476!4.35e-20!3;UBERON:0000920!4.35e-20!3;UBERON:0003124!6.57e-15!7;UBERON:0005631!3.68e-11!14;UBERON:0000158!3.68e-11!14;UBERON:0000478!6.26e-09!24;UBERON:0001282!1.58e-07!1;UBERON:0009842!1.58e-07!1;UBERON:0003704!1.58e-07!1;UBERON:0001171!1.58e-07!1;UBERON:0001172!1.58e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.91e-20;3!UBERON:0000920;5.91e-20;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.37e-20,3;UBERON:0003124,4.04e-09,7 | |||
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|short_description=p@chr10:11927715..11927740,- | |short_description=p@chr10:11927715..11927740,- | ||
}} | }} |
Latest revision as of 10:51, 23 July 2015
Short description: | p@chr10:11927715..11927740, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:11927715..11927740, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.37e-20 | 3 |
myeloid cell | 1.10e-09 | 108 |
common myeloid progenitor | 1.10e-09 | 108 |
germ line cell | 4.04e-09 | 7 |
germ cell | 4.04e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.37e-20 | 3 |
chorion | 4.04e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.35e-85 | 8 |
myeloid leukemia | 3.82e-36 | 31 |
leukemia | 1.38e-28 | 39 |
hematologic cancer | 1.10e-21 | 51 |
immune system cancer | 1.10e-21 | 51 |
islet cell tumor | 3.66e-15 | 1 |
endocrine pancreas cancer | 3.66e-15 | 1 |
pancreatic endocrine carcinoma | 3.66e-15 | 1 |
organ system cancer | 3.10e-09 | 137 |
cancer | 2.24e-07 | 235 |
disease of cellular proliferation | 3.42e-07 | 239 |