FFCP PHASE1:Hg19::chr17:42219383..42219424,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:42219383..42219424,+
|short_description=p2@C17orf53
|description=CAGE_peak_2_at_C17orf53_5end
|association_with_transcript=57bp_to_uc002ifi.1,uc002ifj.1,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=78995 | |EntrezGene=78995 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28460 | |HGNC=28460 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N3J3,A8K7A9 | |UniProt=Q8N3J3,A8K7A9 | ||
|association_with_transcript=57bp_to_uc002ifi.1,uc002ifj.1,uc010czq.1_5end | |||
|cluster_id=chr17:42219383..42219424,+ | |||
|description=CAGE_peak_2_at_C17orf53_5end | |||
|id=chr17:42219383..42219424,+ | |||
|ontology_enrichment_celltype=CL:0000548!7.64e-20!679;CL:0000004!7.64e-20!679;CL:0000255!7.64e-20!679;CL:0000012!1.19e-19!682;CL:0000063!1.20e-10!578;CL:0000066!1.53e-10!254;CL:0000003!1.01e-09!722;CL:0000144!1.38e-09!625;CL:0000055!2.55e-09!180;CL:0000333!4.41e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.53e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.67e-08,10;CL:0000541,3.67e-08,10;CL:0000333,1.33e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!9.14e-24!239;DOID:162!2.61e-23!235;DOID:0050687!2.98e-11!143;DOID:0050686!1.78e-09!137;DOID:305!4.55e-09!106;DOID:2531!2.79e-08!51;DOID:0060083!2.79e-08!51;DOID:1240!1.24e-07!39;DOID:8692!1.81e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.27e-17,239;DOID:162,1.35e-16,235;DOID:2531,3.92e-07,51;DOID:0060083,3.92e-07,51;DOID:0050687,4.24e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.31e-07;9!UBERON:0001557;5.31e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.78e-07,9 | |||
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| ||
|short_description=p2@C17orf53 | |||
}} | }} |
Latest revision as of 19:42, 24 September 2015
Short description: | p2@C17orf53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C17orf53_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_uc002ifi.1, uc002ifj.1, uc010czq.1_5end |
EntrezGene: | C17orf53 |
HGNC: | 28460 |
UniProt: | Q8N3J3A8K7A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.67e-08 | 10 |
melanoblast | 3.67e-08 | 10 |
migratory neural crest cell | 1.33e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.27e-17 | 239 |
cancer | 1.35e-16 | 235 |
hematologic cancer | 3.92e-07 | 51 |
immune system cancer | 3.92e-07 | 51 |
cell type cancer | 4.24e-07 | 143 |