FFCP PHASE1:Hg19::chr3:150690540..150690556,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7401 | |EntrezGene=7401 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12605 | |HGNC=12605 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_ENST00000472224_5end | |association_with_transcript=-39bp_to_ENST00000472224_5end | ||
|cluster_id=chr3:150690540..150690556,- | |||
|coexpression_cluster_id=C369 | |||
|description=CAGE_peak_2_at_CLRN1_5end | |description=CAGE_peak_2_at_CLRN1_5end | ||
|id=chr3:150690540..150690556,- | |id=chr3:150690540..150690556,- | ||
|ontology_enrichment_celltype=CL:0000064!1.96e-34!3;CL:0005012!1.96e-34!3;CL:0000067!1.96e-34!3;CL:0002304!1.96e-34!3;CL:0000039!5.04e-15!7;CL:0000586!5.04e-15!7;CL:0000342!2.46e-12!1;CL:0002565!2.46e-12!1;CL:0000075!2.50e-10!27;CL:0000710!3.54e-09!20 | |ontology_enrichment_celltype=CL:0000064!1.96e-34!3;CL:0005012!1.96e-34!3;CL:0000067!1.96e-34!3;CL:0002304!1.96e-34!3;CL:0000039!5.04e-15!7;CL:0000586!5.04e-15!7;CL:0000342!2.46e-12!1;CL:0002565!2.46e-12!1;CL:0000075!2.50e-10!27;CL:0000710!3.54e-09!20 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.22e-44;3!CL:0000067;1.22e-44;3!CL:0005012;1.22e-44;3!CL:0002304;1.22e-44;3!CL:0000075;8.31e-12;27!CL:0000306;1.12e-09;4!CL:0002222;1.12e-09;4!CL:0002224;1.12e-09;4!CL:0000710;1.33e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.53e-44,3;CL:0000067,1.53e-44,3;CL:0005012,1.53e-44,3;CL:0002304,1.53e-44,3;CL:0000075,8.62e-12,27;CL:0000306,1.12e-09,4;CL:0002222,1.12e-09,4;CL:0002224,1.12e-09,4;CL:0000710,1.38e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.89e-12;3 | |||
|ontology_enrichment_disease=DOID:2355!1.96e-12!1;DOID:74!7.61e-07!2 | |ontology_enrichment_disease=DOID:2355!1.96e-12!1;DOID:74!7.61e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!5.96e-45!4;UBERON:0001778!1.96e-34!3;UBERON:0001775!1.96e-34!3;UBERON:0002203!4.08e-30!6;UBERON:0001768!4.08e-30!6;UBERON:0000970!5.56e-27!20;UBERON:0002104!1.14e-25!21;UBERON:0007625!1.59e-25!11;UBERON:0003135!3.76e-25!11;UBERON:0000020!2.16e-23!23;UBERON:0000473!1.64e-22!8;UBERON:0001032!2.15e-22!24;UBERON:0004456!2.15e-22!24;UBERON:0000019!5.45e-21!19;UBERON:0000047!5.45e-21!19;UBERON:0004088!5.45e-21!19;UBERON:0003072!5.45e-21!19;UBERON:0003071!5.45e-21!19;UBERON:0004128!5.45e-21!19;UBERON:0001801!4.64e-20!14;UBERON:0001456!5.80e-19!21;UBERON:0002200!1.39e-16!11;UBERON:0006876!1.39e-16!11;UBERON:0005085!1.22e-13!29;UBERON:0003101!1.44e-12!22;UBERON:0000079!1.44e-12!22;UBERON:0001301!2.20e-12!1;UBERON:0002506!2.46e-12!1;UBERON:0001769!2.46e-12!1;UBERON:0000991!9.89e-09!21;UBERON:0009196!9.89e-09!21;UBERON:0009117!9.89e-09!21;UBERON:0005564!9.89e-09!21;UBERON:0004176!2.42e-08!22;UBERON:0003056!3.20e-08!61;UBERON:0001444!4.40e-08!48;UBERON:0000007!9.54e-07!2 | |ontology_enrichment_uberon=UBERON:0000488!5.96e-45!4;UBERON:0001778!1.96e-34!3;UBERON:0001775!1.96e-34!3;UBERON:0002203!4.08e-30!6;UBERON:0001768!4.08e-30!6;UBERON:0000970!5.56e-27!20;UBERON:0002104!1.14e-25!21;UBERON:0007625!1.59e-25!11;UBERON:0003135!3.76e-25!11;UBERON:0000020!2.16e-23!23;UBERON:0000473!1.64e-22!8;UBERON:0001032!2.15e-22!24;UBERON:0004456!2.15e-22!24;UBERON:0000019!5.45e-21!19;UBERON:0000047!5.45e-21!19;UBERON:0004088!5.45e-21!19;UBERON:0003072!5.45e-21!19;UBERON:0003071!5.45e-21!19;UBERON:0004128!5.45e-21!19;UBERON:0001801!4.64e-20!14;UBERON:0001456!5.80e-19!21;UBERON:0002200!1.39e-16!11;UBERON:0006876!1.39e-16!11;UBERON:0005085!1.22e-13!29;UBERON:0003101!1.44e-12!22;UBERON:0000079!1.44e-12!22;UBERON:0001301!2.20e-12!1;UBERON:0002506!2.46e-12!1;UBERON:0001769!2.46e-12!1;UBERON:0000991!9.89e-09!21;UBERON:0009196!9.89e-09!21;UBERON:0009117!9.89e-09!21;UBERON:0005564!9.89e-09!21;UBERON:0004176!2.42e-08!22;UBERON:0003056!3.20e-08!61;UBERON:0001444!4.40e-08!48;UBERON:0000007!9.54e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.22e-44;3!UBERON:0001775;1.22e-44;3!UBERON:0000970;1.83e-41;20!UBERON:0002104;1.59e-39;21!UBERON:0000020;3.74e-36;23!UBERON:0001032;1.12e-34;24!UBERON:0004456;1.12e-34;24!UBERON:0000488;8.36e-34;4!UBERON:0000019;2.86e-28;19!UBERON:0000047;2.86e-28;19!UBERON:0004088;2.86e-28;19!UBERON:0010230;2.86e-28;19!UBERON:0007625;9.75e-28;11!UBERON:0001456;1.19e-25;21!UBERON:0002203;6.07e-23;6!UBERON:0001768;6.07e-23;6!UBERON:0002200;6.07e-23;6!UBERON:0001801;5.39e-22;14!UBERON:0006876;5.10e-13;11!UBERON:0010371;3.59e-10;31!UBERON:0010077;1.12e-09;4!UBERON:0005389;1.12e-09;4!UBERON:0000484;1.12e-09;4!UBERON:0000965;1.12e-09;4!UBERON:0001803;1.12e-09;4!UBERON:0000966;7.01e-08;5!UBERON:0005388;7.01e-08;5!UBERON:0001802;7.01e-08;5!UBERON:0001444;7.49e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.53e-44,3;UBERON:0001775,1.53e-44,3;UBERON:0000970,1.72e-39,21;UBERON:0002104,1.72e-39,21;UBERON:0000020,1.20e-34,24;UBERON:0001032,1.20e-34,24;UBERON:0004456,1.20e-34,24;UBERON:0000488,9.88e-34,4;UBERON:0007625,1.07e-27,11;UBERON:0000019,7.25e-27,20;UBERON:0000047,7.25e-27,20;UBERON:0010312,7.25e-27,20;UBERON:0004088,7.25e-27,20;UBERON:0010230,7.25e-27,20;UBERON:0003072,7.25e-27,20;UBERON:0004128,7.25e-27,20;UBERON:0003071,7.25e-27,20;UBERON:0001456,1.71e-24,22;UBERON:0002203,6.78e-23,6;UBERON:0001768,6.78e-23,6;UBERON:0002200,6.78e-23,6;UBERON:0001801,5.79e-22,14;UBERON:0005085,1.37e-17,31;UBERON:0006876,5.42e-13,11;UBERON:0001444,2.34e-11,49;UBERON:0000033,5.25e-10,56;UBERON:0010077,1.12e-09,4;UBERON:0005389,1.12e-09,4;UBERON:0000484,1.12e-09,4;UBERON:0002546,1.12e-09,4;UBERON:0000965,1.12e-09,4;UBERON:0001803,1.12e-09,4;UBERON:0003073,1.12e-09,4;UBERON:0005426,1.12e-09,4;UBERON:0000153,4.34e-09,62;UBERON:0007811,4.34e-09,62;UBERON:0003056,4.34e-09,61;UBERON:0003075,6.53e-07,82;UBERON:0007284,6.53e-07,82;UBERON:0000966,8.97e-07,6;UBERON:0005388,8.97e-07,6;UBERON:0001802,8.97e-07,6 | |||
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|short_description=p2@CLRN1 | |short_description=p2@CLRN1 | ||
}} | }} |
Latest revision as of 00:23, 16 September 2015
Short description: | p2@CLRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLRN1_5end |
Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
Association with transcript: | -39bp_to_ENST00000472224_5end |
EntrezGene: | CLRN1 |
HGNC: | 12605 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.53e-44 | 3 |
ciliated epithelial cell | 1.53e-44 | 3 |
multi-ciliated epithelial cell | 1.53e-44 | 3 |
non-pigmented ciliary epithelial cell | 1.53e-44 | 3 |
columnar/cuboidal epithelial cell | 8.62e-12 | 27 |
crystallin accumulating cell | 1.12e-09 | 4 |
vertebrate lens cell | 1.12e-09 | 4 |
lens epithelial cell | 1.12e-09 | 4 |
neurecto-epithelial cell | 1.38e-07 | 20 |