FFCP PHASE1:Hg19::chr3:141868357..141868393,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7029 | |EntrezGene=7029 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11751 | |HGNC=11751 | ||
|TSSclassifier=strong | |||
|UniProt=C9J5D5,Q14188 | |UniProt=C9J5D5,Q14188 | ||
|association_with_transcript=0bp_to_ENST00000464782,ENST00000467072,ENST00000475734,ENST00000489671,ENST00000491667,ENST00000495095,ENST00000499676,NM_001178138,NM_001178139_5end | |association_with_transcript=0bp_to_ENST00000464782,ENST00000467072,ENST00000475734,ENST00000489671,ENST00000491667,ENST00000495095,ENST00000499676,NM_001178138,NM_001178139_5end | ||
|cluster_id=chr3:141868357..141868393,- | |||
|description=CAGE_peak_3_at_TFDP2_5end | |description=CAGE_peak_3_at_TFDP2_5end | ||
|id=chr3:141868357..141868393,- | |id=chr3:141868357..141868393,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.30e-08;82 | |||
|ontology_enrichment_disease=DOID:162!2.65e-14!235;DOID:0050687!6.49e-14!143;DOID:14566!7.26e-14!239;DOID:305!5.86e-09!106;DOID:0050686!2.10e-07!137 | |ontology_enrichment_disease=DOID:162!2.65e-14!235;DOID:0050687!6.49e-14!143;DOID:14566!7.26e-14!239;DOID:305!5.86e-09!106;DOID:0050686!2.10e-07!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.78e-14,235;DOID:0050687,6.53e-14,143;DOID:14566,7.60e-14,239;DOID:305,5.88e-09,106;DOID:0050686,2.19e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.34e-18!115;UBERON:0000955!2.07e-13!69;UBERON:0006238!2.07e-13!69;UBERON:0000073!3.46e-13!94;UBERON:0001016!3.46e-13!94;UBERON:0001049!5.83e-13!57;UBERON:0005068!5.83e-13!57;UBERON:0006241!5.83e-13!57;UBERON:0007135!5.83e-13!57;UBERON:0001017!5.63e-12!82;UBERON:0005743!6.81e-12!86;UBERON:0002780!2.51e-11!41;UBERON:0001890!2.51e-11!41;UBERON:0006240!2.51e-11!41;UBERON:0003080!7.77e-11!42;UBERON:0002616!1.67e-10!59;UBERON:0002346!6.12e-10!90;UBERON:0003075!1.87e-09!86;UBERON:0007284!1.87e-09!86;UBERON:0001893!4.32e-09!34;UBERON:0001869!4.87e-09!32;UBERON:0002791!9.31e-09!33;UBERON:0002020!9.63e-09!34;UBERON:0003528!9.63e-09!34;UBERON:0002619!2.11e-08!22;UBERON:0000924!4.56e-08!173;UBERON:0006601!4.56e-08!173;UBERON:0000153!5.47e-08!129;UBERON:0007811!5.47e-08!129;UBERON:0001950!1.11e-07!20;UBERON:0004121!1.23e-07!169;UBERON:0002108!3.11e-07!14;UBERON:0000033!5.29e-07!123;UBERON:0005409!5.36e-07!35;UBERON:0003056!8.39e-07!61;UBERON:0000956!9.24e-07!25;UBERON:0000203!9.24e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!3.34e-18!115;UBERON:0000955!2.07e-13!69;UBERON:0006238!2.07e-13!69;UBERON:0000073!3.46e-13!94;UBERON:0001016!3.46e-13!94;UBERON:0001049!5.83e-13!57;UBERON:0005068!5.83e-13!57;UBERON:0006241!5.83e-13!57;UBERON:0007135!5.83e-13!57;UBERON:0001017!5.63e-12!82;UBERON:0005743!6.81e-12!86;UBERON:0002780!2.51e-11!41;UBERON:0001890!2.51e-11!41;UBERON:0006240!2.51e-11!41;UBERON:0003080!7.77e-11!42;UBERON:0002616!1.67e-10!59;UBERON:0002346!6.12e-10!90;UBERON:0003075!1.87e-09!86;UBERON:0007284!1.87e-09!86;UBERON:0001893!4.32e-09!34;UBERON:0001869!4.87e-09!32;UBERON:0002791!9.31e-09!33;UBERON:0002020!9.63e-09!34;UBERON:0003528!9.63e-09!34;UBERON:0002619!2.11e-08!22;UBERON:0000924!4.56e-08!173;UBERON:0006601!4.56e-08!173;UBERON:0000153!5.47e-08!129;UBERON:0007811!5.47e-08!129;UBERON:0001950!1.11e-07!20;UBERON:0004121!1.23e-07!169;UBERON:0002108!3.11e-07!14;UBERON:0000033!5.29e-07!123;UBERON:0005409!5.36e-07!35;UBERON:0003056!8.39e-07!61;UBERON:0000956!9.24e-07!25;UBERON:0000203!9.24e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.26e-08;22!UBERON:0002780;1.60e-08;41!UBERON:0001890;1.60e-08;41!UBERON:0001869;3.37e-08;32!UBERON:0001893;6.79e-08;34!UBERON:0001950;7.17e-08;20!UBERON:0002791;1.05e-07;32!UBERON:0003528;1.06e-07;34!UBERON:0002020;1.06e-07;34!UBERON:0000073;1.99e-07;53!UBERON:0002616;1.99e-07;53!UBERON:0000955;2.72e-07;68!UBERON:0001016;6.67e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.05e-18,114;UBERON:0000955,8.18e-14,68;UBERON:0006238,8.18e-14,68;UBERON:0001016,1.34e-13,89;UBERON:0001049,2.05e-13,56;UBERON:0005068,2.05e-13,56;UBERON:0006241,2.05e-13,56;UBERON:0007135,2.05e-13,56;UBERON:0000073,9.05e-13,53;UBERON:0002616,9.05e-13,53;UBERON:0001017,2.64e-12,81;UBERON:0002780,2.51e-11,41;UBERON:0001890,2.51e-11,41;UBERON:0003080,2.51e-11,41;UBERON:0006240,2.51e-11,41;UBERON:0011216,7.69e-10,223;UBERON:0002346,1.36e-09,86;UBERON:0003075,4.11e-09,82;UBERON:0007284,4.11e-09,82;UBERON:0001893,4.32e-09,34;UBERON:0001869,4.87e-09,32;UBERON:0003528,9.63e-09,34;UBERON:0002020,9.63e-09,34;UBERON:0002791,2.08e-08,32;UBERON:0002619,2.11e-08,22;UBERON:0004121,1.05e-07,171;UBERON:0000924,1.05e-07,171;UBERON:0006601,1.05e-07,171;UBERON:0001950,1.11e-07,20;UBERON:0003056,2.08e-07,61;UBERON:0010371,4.07e-07,104;UBERON:0000956,9.24e-07,25;UBERON:0000203,9.24e-07,25 | |||
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| ||
|short_description=p3@TFDP2 | |short_description=p3@TFDP2 | ||
}} | }} |
Latest revision as of 04:26, 25 September 2015
Short description: | p3@TFDP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TFDP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000464782, ENST00000467072, ENST00000475734, ENST00000489671, ENST00000491667, ENST00000495095, ENST00000499676, NM_001178138, NM_001178139_5end |
EntrezGene: | TFDP2 |
HGNC: | 11751 |
UniProt: | C9J5D5Q14188 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.05e-18 | 114 |
brain | 8.18e-14 | 68 |
future brain | 8.18e-14 | 68 |
nervous system | 1.34e-13 | 89 |
neural tube | 2.05e-13 | 56 |
neural rod | 2.05e-13 | 56 |
future spinal cord | 2.05e-13 | 56 |
neural keel | 2.05e-13 | 56 |
regional part of nervous system | 9.05e-13 | 53 |
regional part of brain | 9.05e-13 | 53 |
central nervous system | 2.64e-12 | 81 |
regional part of forebrain | 2.51e-11 | 41 |
forebrain | 2.51e-11 | 41 |
anterior neural tube | 2.51e-11 | 41 |
future forebrain | 2.51e-11 | 41 |
organ system subdivision | 7.69e-10 | 223 |
neurectoderm | 1.36e-09 | 86 |
neural plate | 4.11e-09 | 82 |
presumptive neural plate | 4.11e-09 | 82 |
telencephalon | 4.32e-09 | 34 |
cerebral hemisphere | 4.87e-09 | 32 |
brain grey matter | 9.63e-09 | 34 |
gray matter | 9.63e-09 | 34 |
regional part of telencephalon | 2.08e-08 | 32 |
regional part of cerebral cortex | 2.11e-08 | 22 |
ectoderm-derived structure | 1.05e-07 | 171 |
ectoderm | 1.05e-07 | 171 |
presumptive ectoderm | 1.05e-07 | 171 |
neocortex | 1.11e-07 | 20 |
pre-chordal neural plate | 2.08e-07 | 61 |
ecto-epithelium | 4.07e-07 | 104 |
cerebral cortex | 9.24e-07 | 25 |
pallium | 9.24e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.78e-14 | 235 |
cell type cancer | 6.53e-14 | 143 |
disease of cellular proliferation | 7.60e-14 | 239 |
carcinoma | 5.88e-09 | 106 |
organ system cancer | 2.19e-07 | 137 |