FFCP PHASE1:Hg19::chr2:24551087..24551100,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50618 | |EntrezGene=50618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6184 | |HGNC=6184 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_ENST00000361999_5end | |association_with_transcript=-100bp_to_ENST00000361999_5end | ||
|cluster_id=chr2:24551087..24551100,- | |||
|description=CAGE_peak_12_at_ITSN2_5end | |description=CAGE_peak_12_at_ITSN2_5end | ||
|id=chr2:24551087..24551100,- | |id=chr2:24551087..24551100,- | ||
|ontology_enrichment_celltype=CL:0002393!2.00e-12!9;CL:0002397!2.00e-12!9;CL:0002619!5.37e-11!3;CL:0002194!5.45e-07!63;CL:0000576!5.45e-07!63;CL:0000040!5.45e-07!63;CL:0000559!5.45e-07!63 | |ontology_enrichment_celltype=CL:0002393!2.00e-12!9;CL:0002397!2.00e-12!9;CL:0002619!5.37e-11!3;CL:0002194!5.45e-07!63;CL:0000576!5.45e-07!63;CL:0000040!5.45e-07!63;CL:0000559!5.45e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.01e-17;6!CL:0002619;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.85e-17,6;CL:0002619,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;7.73e-21;5!UBERON:0004872;3.17e-15;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.40e-20!115;UBERON:0004177!7.80e-08!7;UBERON:0000341!8.09e-08!2;UBERON:0002390!6.52e-07!102;UBERON:0003061!6.52e-07!102;UBERON:0002193!9.23e-07!112 | |ontology_enrichment_uberon=UBERON:0007023!4.40e-20!115;UBERON:0004177!7.80e-08!7;UBERON:0000341!8.09e-08!2;UBERON:0002390!6.52e-07!102;UBERON:0003061!6.52e-07!102;UBERON:0002193!9.23e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;5.06e-34;3!UBERON:0004177;6.99e-21;5!UBERON:0005057;6.99e-21;5!UBERON:0002046;7.73e-21;5!UBERON:0000341;1.14e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.33e-34,3;UBERON:0004854,3.33e-34,3;UBERON:0009034,3.33e-34,3;UBERON:0002095,3.33e-34,3;UBERON:0004782,3.33e-34,3;UBERON:0003281,3.33e-34,3;UBERON:0009664,3.33e-34,3;UBERON:0002296,3.33e-34,3;UBERON:0005602,3.33e-34,3;UBERON:0001179,3.33e-34,3;UBERON:0006293,3.33e-34,3;UBERON:0002046,7.35e-21,5;UBERON:0004117,7.35e-21,5;UBERON:0007689,7.35e-21,5;UBERON:0007123,7.35e-21,5;UBERON:0003091,7.35e-21,5;UBERON:0004177,2.65e-15,7;UBERON:0005057,2.65e-15,7;UBERON:0000341,1.37e-13,2;UBERON:0000945,1.61e-13,8;UBERON:0010039,1.61e-13,8;UBERON:0009722,4.83e-10,11;UBERON:0007690,4.83e-10,11;UBERON:0004457,2.44e-09,12;UBERON:0000042,2.44e-09,12;UBERON:0003887,2.44e-09,12;UBERON:0002405,8.13e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0,0,0.223915474239924,0.647787332037959,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.649094787309367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,1.96973604869918,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0.455324382702595,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0.196308467114945,0,0,0,4.0413084731337,1.99819452718089,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,1.1903221573187,0.193766729508018,0.124149428591716,0,1.84576759006678,2.62752345645685,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0,0,0.223915474239924,0.647787332037959,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.649094787309367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,1.96973604869918,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0.455324382702595,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0.196308467114945,0,0,0,4.0413084731337,1.99819452718089,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,1.1903221573187,0.193766729508018,0.124149428591716,0,1.84576759006678,2.62752345645685,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p12@ITSN2 | |short_description=p12@ITSN2 | ||
}} | }} |
Latest revision as of 12:47, 16 September 2015
Short description: | p12@ITSN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ITSN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000361999_5end |
EntrezGene: | ITSN2 |
HGNC: | 6184 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.85e-17 | 6 |
adult endothelial progenitor cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.33e-34 | 3 |
gastrointestinal system mesentery | 3.33e-34 | 3 |
stomach region | 3.33e-34 | 3 |
mesentery | 3.33e-34 | 3 |
gastrointestinal system serosa | 3.33e-34 | 3 |
mesentery of stomach | 3.33e-34 | 3 |
gut mesentery | 3.33e-34 | 3 |
dorsal mesentery | 3.33e-34 | 3 |
dorsal mesogastrium | 3.33e-34 | 3 |
peritoneal cavity | 3.33e-34 | 3 |
spleen primordium | 3.33e-34 | 3 |
thyroid gland | 7.35e-21 | 5 |
pharyngeal pouch | 7.35e-21 | 5 |
thyroid diverticulum | 7.35e-21 | 5 |
pharyngeal pouch 2 | 7.35e-21 | 5 |
thyroid primordium | 7.35e-21 | 5 |
hemopoietic organ | 2.65e-15 | 7 |
immune organ | 2.65e-15 | 7 |
throat | 1.37e-13 | 2 |
stomach | 1.61e-13 | 8 |
food storage organ | 1.61e-13 | 8 |
entire pharyngeal arch endoderm | 4.83e-10 | 11 |
early pharyngeal endoderm | 4.83e-10 | 11 |
cavity lining | 2.44e-09 | 12 |
serous membrane | 2.44e-09 | 12 |
intraembryonic coelom | 2.44e-09 | 12 |
immune system | 8.13e-07 | 93 |