FFCP PHASE1:Hg19::chr21:26713474..26713508,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:26713474..26713508,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr21:26713474..26713508,- | |description=CAGE_peak_at_chr21:26713474..26713508,- | ||
|id=chr21:26713474..26713508,- | |id=chr21:26713474..26713508,- | ||
|ontology_enrichment_celltype=CL:0000359!9.54e-20!32;CL:0000192!1.55e-14!42;CL:0000514!1.55e-14!42;CL:0000055!7.46e-13!180;CL:0002589!1.05e-12!2;CL:0002595!3.33e-11!5;CL:0000187!7.81e-11!54;CL:0000680!3.74e-10!57;CL:0000056!3.74e-10!57;CL:0000355!3.74e-10!57;CL:0000183!9.73e-10!59;CL:0000393!1.53e-09!60;CL:0000211!1.53e-09!60;CL:0002620!4.24e-08!23;CL:0002568!7.57e-07!1 | |ontology_enrichment_celltype=CL:0000359!9.54e-20!32;CL:0000192!1.55e-14!42;CL:0000514!1.55e-14!42;CL:0000055!7.46e-13!180;CL:0002589!1.05e-12!2;CL:0002595!3.33e-11!5;CL:0000187!7.81e-11!54;CL:0000680!3.74e-10!57;CL:0000056!3.74e-10!57;CL:0000355!3.74e-10!57;CL:0000183!9.73e-10!59;CL:0000393!1.53e-09!60;CL:0000211!1.53e-09!60;CL:0002620!4.24e-08!23;CL:0002568!7.57e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.28e-23;5!CL:0002593;1.33e-15;2!CL:0002589;2.05e-15;2!CL:0002596;2.05e-15;2!CL:0000359;1.15e-13;32!CL:0002582;9.90e-11;3!CL:0000192;1.14e-08;43!CL:0000187;3.26e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.14e-23,5;CL:0002593,1.33e-15,2;CL:0002596,1.54e-15,2;CL:0002589,2.05e-15,2;CL:0000359,1.11e-14,32;CL:0000192,4.64e-11,43;CL:0000514,4.64e-11,43;CL:0002582,1.20e-10,3;CL:0000187,9.53e-09,55;CL:0000680,2.57e-08,58;CL:0000056,2.57e-08,58;CL:0000355,2.57e-08,58;CL:0000393,6.28e-08,61;CL:0000211,6.28e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.14e-08;43!CL:0000355;2.08e-07;58 | |||
|ontology_enrichment_disease=DOID:3371!2.09e-07!1;DOID:4549!2.09e-07!1;DOID:5861!2.09e-07!1;DOID:6496!2.09e-07!1 | |ontology_enrichment_disease=DOID:3371!2.09e-07!1;DOID:4549!2.09e-07!1;DOID:5861!2.09e-07!1;DOID:6496!2.09e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;7.48e-30;1!DOID:4549;7.48e-30;1!DOID:5861;7.48e-30;1!DOID:6496;7.48e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.48e-30,1;DOID:4549,7.48e-30,1;DOID:5861,7.48e-30,1;DOID:6496,7.48e-30,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003834;1.28e-23;5!UBERON:0001533;1.28e-23;5!UBERON:0003513;3.42e-17;7!UBERON:0002456;1.33e-15;2!UBERON:0001529;2.05e-15;2!UBERON:0005396;2.05e-15;2!UBERON:0007204;2.05e-15;2!UBERON:0004573;7.51e-14;33!UBERON:0004571;7.51e-14;33!UBERON:0002418;6.73e-11;3!UBERON:0004755;6.73e-11;3!UBERON:0002119;2.26e-08;4!UBERON:0001637;3.22e-08;42!UBERON:0003509;3.22e-08;42!UBERON:0004572;3.22e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.14e-23,5;UBERON:0001533,1.14e-23,5;UBERON:0003513,3.15e-17,7;UBERON:0002456,1.33e-15,2;UBERON:0005396,1.54e-15,2;UBERON:0001529,2.05e-15,2;UBERON:0007204,2.05e-15,2;UBERON:0004573,2.97e-14,33;UBERON:0004571,2.97e-14,33;UBERON:0001637,2.60e-11,42;UBERON:0003509,2.60e-11,42;UBERON:0004572,2.60e-11,42;UBERON:0002418,6.73e-11,3;UBERON:0004755,6.73e-11,3;UBERON:0002119,2.43e-08,4;UBERON:0007500,3.49e-08,59;UBERON:0001981,3.49e-08,59;UBERON:0004537,3.49e-08,59;UBERON:0006965,3.49e-08,59;UBERON:0001134,8.30e-08,62;UBERON:0002036,8.30e-08,62;UBERON:0003082,8.30e-08,62;UBERON:0002385,1.41e-07,64;UBERON:0001015,1.41e-07,64;UBERON:0000383,1.41e-07,64;UBERON:0000055,3.74e-07,68;UBERON:0002329,7.23e-07,71;UBERON:0003059,7.23e-07,71;UBERON:0007282,7.23e-07,71;UBERON:0004290,7.23e-07,71;UBERON:0009618,7.23e-07,71;UBERON:0003077,8.90e-07,72;UBERON:0007285,8.90e-07,72 | |||
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|short_description=p@chr21:26713474..26713508,- | |short_description=p@chr21:26713474..26713508,- | ||
}} | }} |
Latest revision as of 16:56, 28 July 2015
Short description: | p@chr21:26713474..26713508, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:26713474..26713508, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.14e-23 | 5 |
smooth muscle cell of the internal thoracic artery | 1.33e-15 | 2 |
smooth muscle cell of the carotid artery | 1.54e-15 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 2.05e-15 | 2 |
vascular associated smooth muscle cell | 1.11e-14 | 32 |
smooth muscle cell | 4.64e-11 | 43 |
smooth muscle myoblast | 4.64e-11 | 43 |
visceral preadipocyte | 1.20e-10 | 3 |
muscle cell | 9.53e-09 | 55 |
muscle precursor cell | 2.57e-08 | 58 |
myoblast | 2.57e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.57e-08 | 58 |
electrically responsive cell | 6.28e-08 | 61 |
electrically active cell | 6.28e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.14e-23 | 5 |
subclavian artery | 1.14e-23 | 5 |
trunk blood vessel | 3.15e-17 | 7 |
internal thoracic artery | 1.33e-15 | 2 |
carotid artery segment | 1.54e-15 | 2 |
brachiocephalic artery | 2.05e-15 | 2 |
brachiocephalic vasculature | 2.05e-15 | 2 |
systemic artery | 2.97e-14 | 33 |
systemic arterial system | 2.97e-14 | 33 |
artery | 2.60e-11 | 42 |
arterial blood vessel | 2.60e-11 | 42 |
arterial system | 2.60e-11 | 42 |
cartilage tissue | 6.73e-11 | 3 |
skeletal tissue | 6.73e-11 | 3 |
left ovary | 2.43e-08 | 4 |
epithelial tube open at both ends | 3.49e-08 | 59 |
blood vessel | 3.49e-08 | 59 |
blood vasculature | 3.49e-08 | 59 |
vascular cord | 3.49e-08 | 59 |
skeletal muscle tissue | 8.30e-08 | 62 |
striated muscle tissue | 8.30e-08 | 62 |
myotome | 8.30e-08 | 62 |
muscle tissue | 1.41e-07 | 64 |
musculature | 1.41e-07 | 64 |
musculature of body | 1.41e-07 | 64 |
vessel | 3.74e-07 | 68 |
somite | 7.23e-07 | 71 |
presomitic mesoderm | 7.23e-07 | 71 |
presumptive segmental plate | 7.23e-07 | 71 |
dermomyotome | 7.23e-07 | 71 |
trunk paraxial mesoderm | 7.23e-07 | 71 |
paraxial mesoderm | 8.90e-07 | 72 |
presumptive paraxial mesoderm | 8.90e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.48e-30 | 1 |
extraosseous chondrosarcoma | 7.48e-30 | 1 |
myxoid chondrosarcoma | 7.48e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 7.48e-30 | 1 |