FFCP PHASE1:Hg19::chr1:66798058..66798070,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5142 | |EntrezGene=5142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |HGNC=8781 | ||
|TSSclassifier=strong | |||
|UniProt=Q07343,Q5TEK5 | |UniProt=Q07343,Q5TEK5 | ||
|association_with_transcript=265bp_to_NM_001037339,uc001dcq.2_5end | |association_with_transcript=265bp_to_NM_001037339,uc001dcq.2_5end | ||
|cluster_id=chr1:66798058..66798070,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_11_at_PDE4B_5end | |description=CAGE_peak_11_at_PDE4B_5end | ||
|id=chr1:66798058..66798070,+ | |id=chr1:66798058..66798070,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.75e-14!42;CL:0000860!4.60e-12!45;CL:0000738!5.95e-12!140;CL:0000766!3.71e-09!76;CL:0002009!4.24e-08!65;CL:0002087!9.83e-08!119;CL:0000094!2.05e-07!8;CL:0002194!3.00e-07!63;CL:0000576!3.00e-07!63;CL:0000040!3.00e-07!63;CL:0000559!3.00e-07!63 | |ontology_enrichment_celltype=CL:0002057!4.75e-14!42;CL:0000860!4.60e-12!45;CL:0000738!5.95e-12!140;CL:0000766!3.71e-09!76;CL:0002009!4.24e-08!65;CL:0002087!9.83e-08!119;CL:0000094!2.05e-07!8;CL:0002194!3.00e-07!63;CL:0000576!3.00e-07!63;CL:0000040!3.00e-07!63;CL:0000559!3.00e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.22e-16;33!CL:0002057;6.22e-16;33!CL:0000094;2.59e-14;8!CL:0000473;8.27e-12;39!CL:0000234;8.27e-12;39!CL:0000081;6.95e-10;11!CL:0000453;4.39e-09;5!CL:0000451;5.61e-09;10!CL:0000766;6.73e-09;69!CL:0000576;1.31e-08;48!CL:0000775;5.63e-07;3!CL:0000990;7.70e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.59e-21,136;CL:0000766,1.33e-18,72;CL:0000860,7.88e-18,42;CL:0002057,7.88e-18,42;CL:0000473,5.42e-16,48;CL:0000234,5.42e-16,48;CL:0000037,1.01e-14,168;CL:0002009,2.20e-14,61;CL:0000094,2.46e-14,8;CL:0000763,1.19e-13,108;CL:0000049,1.19e-13,108;CL:0000988,3.22e-13,177;CL:0002194,1.41e-12,59;CL:0000576,1.41e-12,59;CL:0000040,1.41e-12,59;CL:0000559,1.41e-12,59;CL:0000557,2.20e-12,67;CL:0002032,2.15e-11,161;CL:0000837,2.15e-11,161;CL:0002087,1.10e-10,115;CL:0000839,1.75e-10,66;CL:0000081,6.70e-10,11;CL:0000453,3.35e-09,5;CL:0002031,3.70e-09,120;CL:0000451,4.88e-09,10;CL:0000134,3.46e-07,354;CL:0000775,5.79e-07,3;CL:0000990,6.51e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;7.92e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.56e-14!115;UBERON:0001049!1.61e-10!57;UBERON:0005068!1.61e-10!57;UBERON:0006241!1.61e-10!57;UBERON:0007135!1.61e-10!57;UBERON:0002616!1.13e-08!59;UBERON:0002346!5.72e-08!90;UBERON:0002780!6.19e-08!41;UBERON:0001890!6.19e-08!41;UBERON:0006240!6.19e-08!41;UBERON:0001017!9.86e-08!82;UBERON:0005743!1.33e-07!86;UBERON:0003080!1.73e-07!42;UBERON:0003075!2.36e-07!86;UBERON:0007284!2.36e-07!86;UBERON:0002020!3.18e-07!34;UBERON:0003528!3.18e-07!34;UBERON:0000955!9.15e-07!69;UBERON:0006238!9.15e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!7.56e-14!115;UBERON:0001049!1.61e-10!57;UBERON:0005068!1.61e-10!57;UBERON:0006241!1.61e-10!57;UBERON:0007135!1.61e-10!57;UBERON:0002616!1.13e-08!59;UBERON:0002346!5.72e-08!90;UBERON:0002780!6.19e-08!41;UBERON:0001890!6.19e-08!41;UBERON:0006240!6.19e-08!41;UBERON:0001017!9.86e-08!82;UBERON:0005743!1.33e-07!86;UBERON:0003080!1.73e-07!42;UBERON:0003075!2.36e-07!86;UBERON:0007284!2.36e-07!86;UBERON:0002020!3.18e-07!34;UBERON:0003528!3.18e-07!34;UBERON:0000955!9.15e-07!69;UBERON:0006238!9.15e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.90e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.51e-11,76;UBERON:0002193,7.16e-11,108;UBERON:0002405,1.30e-10,93;UBERON:0001474,1.58e-10,82;UBERON:0002390,1.37e-09,98;UBERON:0003061,1.37e-09,98;UBERON:0004765,6.94e-09,90;UBERON:0001434,7.51e-08,100;UBERON:0002298,2.30e-07,6;UBERON:0001049,3.41e-07,56;UBERON:0005068,3.41e-07,56;UBERON:0006241,3.41e-07,56;UBERON:0007135,3.41e-07,56 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.990130823680373,0.662794751455832,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,3.54027849164014,1.15148819429164,1.54816123316076,0,0,0,0,0.142169232487422,1.46800219667424,10.5259127621057,6.61796676651468,3.68918480216948,0,0,0,0.145398238779565,0.377875943688809,0,1.39457422143411,0,1.23882548358041,1.43846196161075,1.0246428261164,1.6553756092201,3.7922024881028,3.22742341791913,2.70852973188684,2.25890807451126,0.818718450173537,4.26974620445661,5.20342617030534,6.09765151444578,6.39337125799041,0.659702600373432,0.398927315243264,0.426224750532694,6.38460324982885,1.70215567407342,4.9825779919646,1.25624332628372,0.521482918420201,0.868755378820466,3.02699751316684,4.41933163185078,5.37986058649504,0.211255286311942,0.637812899895131,0,0.44931452458598,1.35159203557356,0.803627933485401,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,2.86216126360609,2.84606484554724,5.87237189370939,2.29363936875137,1.32171328579026,0.560508562981536,0,1.180258620683,0.393010762749165,3.49522548299166,0.167186495390678,0.977766799900771,0.946895611469467,0,0.445641827540694,2.06224135232386,1.10766947291811,1.08321545506006,0.25618263945135,0.260118695119756,0.164437904603676,0,0.289803085735052,0.593146252648242,0.802622484269139,1.04535523804977,0,0.383220493601921,0.34362744548263,2.78321661221453,0,0.651083453856419,0,0.752875595388864,0.255973222308837,0,0.473554504088034,0,1.41124720257313,0.267440195783507,0.579297615531196,0,0,0.255725123687061,0,1.00267582127178,2.31754430337318,1.5905718941022,1.45990461090791,0.378139268656271,0.443458794925128,0.087834785693126,0.327447688744282,0,0,0,0,0,5.48528435902286,1.14398982156026,1.48583000531826,0.79504962946682,0,1.38856200643038,0.56530794192401,0,0.550236083880135,0.208994966536811,0.516833518338658,0,0,0.805658634218294,2.28081631715554,0.24406205754817,0.735326160691737,0.81014194788176,1.16089646769304,0.44905874525234,1.0135033243499,0,0.949265659568129,1.09921046358244,22.4026709641308,15.511210565933,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.653847612453835,0.302714855289863,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,2.37600571456411,0.247266929278557,0,0,0,0.125118519871964,0,0,0.612975591598039,0.600952235626387,0.226864366320042,1.07633781413317,1.2813443329114,1.05965950579781,0,0.92747276314595,1.8034837803194,0.18611685633159,2.02531598689519,0.779496041289589,1.00973509697646,0.920498986422993,0.646584227275248,0.710019185033229,0.302256294682921,0.67824236924195,0,0.272746120590835,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,1.44366447761074,1.38895653772983,2.09279567458058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507983154337352,0,0,0,0.514137463516618,0,0.285826432630578,0.448524337381443,0.43596006883328,0.2933531432838,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,1.18218456121156,0.646882724578552,0.898401253958239,0.76228387266739,0,0,0,0,19.4741826226267,8.97484377612075,15.3333739971333,0.24538298343828,0,0.271265023699736,0,0.356857977594324,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0,0,1.24060815673732,1.94142780736755,2.66818894508611,0,0,0,0,1.53461973288062,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0.512900250232778,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0.214840489736547,0.290033387828457,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0.876901770507525,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0.633322905892992,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0.313359791546046,0,0.50787533340481,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.222886768554957,0,0,0.296964680832639,0,0,1.1253553312841,0.111308705022906,0,5.70038601945582,0,0,0,0,0,0.311039587661807,0,0,0,0.493217028184668,0,0,0,1.11321717794222,0,0,0.874599999961957,0,0,0,0.472775363535873,0,1.45802306691627,0.173624994933292,0,2.17073589525734,0,1.65868889896837,0.886642856860642,0.438770794307945,0,0,0.0769502585037971,1.36730467016401,0,0,0,0,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0.123563938946503,0.104421949505455,0.606610196826093,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,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| ||
|short_description=p11@PDE4B | |short_description=p11@PDE4B | ||
}} | }} |
Latest revision as of 00:25, 19 September 2015
Short description: | p11@PDE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PDE4B_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 265bp_to_NM_001037339, uc001dcq.2_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | Q07343Q5TEK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.59e-21 | 136 |
myeloid leukocyte | 1.33e-18 | 72 |
classical monocyte | 7.88e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.88e-18 | 42 |
defensive cell | 5.42e-16 | 48 |
phagocyte | 5.42e-16 | 48 |
hematopoietic stem cell | 1.01e-14 | 168 |
macrophage dendritic cell progenitor | 2.20e-14 | 61 |
granulocyte | 2.46e-14 | 8 |
myeloid cell | 1.19e-13 | 108 |
common myeloid progenitor | 1.19e-13 | 108 |
hematopoietic cell | 3.22e-13 | 177 |
monopoietic cell | 1.41e-12 | 59 |
monocyte | 1.41e-12 | 59 |
monoblast | 1.41e-12 | 59 |
promonocyte | 1.41e-12 | 59 |
granulocyte monocyte progenitor cell | 2.20e-12 | 67 |
hematopoietic oligopotent progenitor cell | 2.15e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.15e-11 | 161 |
nongranular leukocyte | 1.10e-10 | 115 |
myeloid lineage restricted progenitor cell | 1.75e-10 | 66 |
blood cell | 6.70e-10 | 11 |
Langerhans cell | 3.35e-09 | 5 |
hematopoietic lineage restricted progenitor cell | 3.70e-09 | 120 |
dendritic cell | 4.88e-09 | 10 |
mesenchymal cell | 3.46e-07 | 354 |
neutrophil | 5.79e-07 | 3 |
conventional dendritic cell | 6.51e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.51e-11 | 76 |
hemolymphoid system | 7.16e-11 | 108 |
immune system | 1.30e-10 | 93 |
bone element | 1.58e-10 | 82 |
hematopoietic system | 1.37e-09 | 98 |
blood island | 1.37e-09 | 98 |
skeletal element | 6.94e-09 | 90 |
skeletal system | 7.51e-08 | 100 |
brainstem | 2.30e-07 | 6 |
neural tube | 3.41e-07 | 56 |
neural rod | 3.41e-07 | 56 |
future spinal cord | 3.41e-07 | 56 |
neural keel | 3.41e-07 | 56 |