FFCP PHASE1:Hg19::chr1:203148428..203148437,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1116 | |EntrezGene=1116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1932 | |HGNC=1932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=173bp_to_uc001gzl.3_5end | |association_with_transcript=173bp_to_uc001gzl.3_5end | ||
|cluster_id=chr1:203148428..203148437,- | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_11_at_CHI3L1_5end | |description=CAGE_peak_11_at_CHI3L1_5end | ||
|id=chr1:203148428..203148437,- | |id=chr1:203148428..203148437,- | ||
|ontology_enrichment_celltype=CL:0000153!1.16e-17!9;CL:0000447!1.16e-17!9;CL:0000667!6.48e-14!6;CL:0000058!6.48e-14!6;CL:0000138!6.48e-14!6;CL:0000499!1.82e-12!27;CL:0000327!6.30e-11!14;CL:0000135!9.15e-11!3;CL:0000386!9.15e-11!3;CL:0000388!9.15e-11!3;CL:0000151!3.05e-07!35 | |ontology_enrichment_celltype=CL:0000153!1.16e-17!9;CL:0000447!1.16e-17!9;CL:0000667!6.48e-14!6;CL:0000058!6.48e-14!6;CL:0000138!6.48e-14!6;CL:0000499!1.82e-12!27;CL:0000327!6.30e-11!14;CL:0000135!9.15e-11!3;CL:0000386!9.15e-11!3;CL:0000388!9.15e-11!3;CL:0000151!3.05e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.02e-46;9!CL:0000447;1.02e-46;9!CL:0000138;7.59e-36;6!CL:0000327;8.53e-28;15!CL:0000499;3.59e-24;28!CL:0002540;4.61e-14;6!CL:0000235;1.93e-13;6!CL:0000135;4.34e-13;3!CL:0000388;4.34e-13;3!CL:0000214;5.34e-13;3!CL:0000182;1.16e-11;12!CL:0000151;4.00e-09;36!CL:0002092;1.22e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,8.58e-47,9;CL:0000447,8.58e-47,9;CL:0000058,6.58e-36,6;CL:0000138,6.58e-36,6;CL:0000327,7.72e-28,15;CL:0000499,3.35e-24,28;CL:0002540,4.72e-14,6;CL:0000235,2.15e-13,6;CL:0000135,4.34e-13,3;CL:0000388,4.34e-13,3;CL:0000214,5.19e-13,3;CL:0000182,1.24e-11,12;CL:0000151,3.45e-11,36;CL:0002092,1.23e-08,10;CL:0000134,1.70e-07,354;CL:0002320,2.78e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;7.88e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,6.91e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!9.15e-11!3 | |ontology_enrichment_uberon=UBERON:0000043!9.15e-11!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.34e-13;3!UBERON:0000043;4.34e-13;3!UBERON:0007845;4.34e-13;3!UBERON:0006915;5.34e-13;3!UBERON:0007616;5.34e-13;3!UBERON:0002217;5.34e-13;3!UBERON:0002018;5.34e-13;3!UBERON:0002107;2.00e-07;19!UBERON:0006925;2.00e-07;19!UBERON:0002371;2.82e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.34e-13,3;UBERON:0000043,4.34e-13,3;UBERON:0007845,4.34e-13,3;UBERON:0006915,5.19e-13,3;UBERON:0007616,5.19e-13,3;UBERON:0002217,5.19e-13,3;UBERON:0002018,5.19e-13,3;UBERON:0002107,2.09e-07,19;UBERON:0006925,2.09e-07,19;UBERON:0008836,2.09e-07,19;UBERON:0002384,5.45e-07,371 | |||
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| ||
|short_description=p11@CHI3L1 | |short_description=p11@CHI3L1 | ||
}} | }} |
Latest revision as of 22:04, 19 September 2015
Short description: | p11@CHI3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CHI3L1_5end |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | 173bp_to_uc001gzl.3_5end |
EntrezGene: | CHI3L1 |
HGNC: | 1932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 8.58e-47 | 9 |
carbohydrate secreting cell | 8.58e-47 | 9 |
chondroblast | 6.58e-36 | 6 |
chondrocyte | 6.58e-36 | 6 |
extracellular matrix secreting cell | 7.72e-28 | 15 |
stromal cell | 3.35e-24 | 28 |
mesenchymal stem cell of the bone marrow | 4.72e-14 | 6 |
macrophage | 2.15e-13 | 6 |
fibrocyte | 4.34e-13 | 3 |
tendon cell | 4.34e-13 | 3 |
synovial cell | 5.19e-13 | 3 |
hepatocyte | 1.24e-11 | 12 |
secretory cell | 3.45e-11 | 36 |
bone marrow cell | 1.23e-08 | 10 |
mesenchymal cell | 1.70e-07 | 354 |
connective tissue cell | 2.78e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.34e-13 | 3 |
tendon | 4.34e-13 | 3 |
regular connective tissue | 4.34e-13 | 3 |
stratified squamous epithelium | 5.19e-13 | 3 |
layer of synovial tissue | 5.19e-13 | 3 |
synovial joint | 5.19e-13 | 3 |
synovial membrane of synovial joint | 5.19e-13 | 3 |
liver | 2.09e-07 | 19 |
digestive gland | 2.09e-07 | 19 |
liver bud | 2.09e-07 | 19 |
connective tissue | 5.45e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 6.91e-10 | 1 |