FFCP PHASE1:Hg19::chr17:3461092..3461126,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:3461092..3461126,-
|short_description=p1@TRPV3
|description=CAGE_peak_1_at_TRPV3_5end
|association_with_transcript=-31bp_to_ENST00000430263_5end
|EntrezG...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=162514 | |EntrezGene=162514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18084 | |HGNC=18084 | ||
|TSSclassifier=strong | |||
|UniProt=E7EV24 | |UniProt=E7EV24 | ||
|association_with_transcript=-31bp_to_ENST00000430263_5end | |||
|cluster_id=chr17:3461092..3461126,- | |||
|description=CAGE_peak_1_at_TRPV3_5end | |||
|id=chr17:3461092..3461126,- | |||
|ontology_enrichment_celltype=CL:0002076!2.48e-09!43;CL:0000066!8.52e-09!254;CL:0000223!1.14e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.50e-09;42!CL:0002159;1.68e-08;14!CL:0002368;2.54e-08;13!CL:0002621;6.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.95e-11,42;CL:0000066,1.08e-10,253;CL:0000223,1.35e-10,58;CL:0002159,1.52e-08,14;CL:0002368,2.28e-08,13;CL:0002621,6.75e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.93e-11!169;UBERON:0000925!4.93e-11!169;UBERON:0006595!4.93e-11!169;UBERON:0001007!1.35e-09!155;UBERON:0001555!1.35e-09!155;UBERON:0007026!1.35e-09!155;UBERON:0004921!4.78e-09!129;UBERON:0004185!4.78e-09!129;UBERON:0000077!8.36e-09!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.84e-09;33!UBERON:0005409;2.45e-08;22!UBERON:0000160;3.88e-08;17!UBERON:0001949;6.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.14e-10,160;UBERON:0000925,1.14e-10,160;UBERON:0006595,1.14e-10,160;UBERON:0005409,2.15e-08,25;UBERON:0001007,2.17e-08,145;UBERON:0001555,2.17e-08,145;UBERON:0007026,2.17e-08,145;UBERON:0000160,3.81e-08,17;UBERON:0004921,6.23e-08,118;UBERON:0005631,8.59e-08,14;UBERON:0000158,8.59e-08,14;UBERON:0001949,6.75e-07,3 | |||
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| ||
|short_description=p1@TRPV3 | |||
}} | }} |
Latest revision as of 16:51, 19 September 2015
Short description: | p1@TRPV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRPV3_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000430263_5end |
EntrezGene: | TRPV3 |
HGNC: | 18084 |
UniProt: | E7EV24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.95e-11 | 42 |
epithelial cell | 1.08e-10 | 253 |
endodermal cell | 1.35e-10 | 58 |
general ecto-epithelial cell | 1.52e-08 | 14 |
respiratory epithelial cell | 2.28e-08 | 13 |
gingival epithelial cell | 6.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.14e-10 | 160 |
endoderm | 1.14e-10 | 160 |
presumptive endoderm | 1.14e-10 | 160 |
gastrointestinal system | 2.15e-08 | 25 |
digestive system | 2.17e-08 | 145 |
digestive tract | 2.17e-08 | 145 |
primitive gut | 2.17e-08 | 145 |
intestine | 3.81e-08 | 17 |
subdivision of digestive tract | 6.23e-08 | 118 |
extraembryonic membrane | 8.59e-08 | 14 |
membranous layer | 8.59e-08 | 14 |
gingival epithelium | 6.75e-07 | 3 |