FFCP PHASE1:Hg19::chr18:19749353..19749367,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2627 | |EntrezGene=2627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4174 | |HGNC=4174 | ||
|TSSclassifier=strong | |||
|UniProt=Q92908 | |UniProt=Q92908 | ||
|association_with_transcript=-36bp_to_ENST00000269216_5end | |association_with_transcript=-36bp_to_ENST00000269216_5end | ||
|cluster_id=chr18:19749353..19749367,+ | |||
|description=CAGE_peak_4_at_GATA6_5end | |description=CAGE_peak_4_at_GATA6_5end | ||
|id=chr18:19749353..19749367,+ | |id=chr18:19749353..19749367,+ | ||
|ontology_enrichment_celltype=CL:0000192!2.88e-08!42;CL:0000514!2.88e-08!42;CL:0000187!3.11e-08!54;CL:0002494!4.69e-08!16;CL:0000359!5.66e-08!32;CL:0000222!7.59e-08!119;CL:0000183!1.39e-07!59;CL:0000680!1.84e-07!57;CL:0000056!1.84e-07!57;CL:0000355!1.84e-07!57 | |ontology_enrichment_celltype=CL:0000192!2.88e-08!42;CL:0000514!2.88e-08!42;CL:0000187!3.11e-08!54;CL:0002494!4.69e-08!16;CL:0000359!5.66e-08!32;CL:0000222!7.59e-08!119;CL:0000183!1.39e-07!59;CL:0000680!1.84e-07!57;CL:0000056!1.84e-07!57;CL:0000355!1.84e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.13e-12;32!CL:0002494;2.33e-08;16!CL:0000192;4.63e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.65e-13,32;CL:0000192,6.29e-10,43;CL:0000514,6.29e-10,43;CL:0000187,3.84e-09,55;CL:0002494,1.97e-08,16;CL:0000680,2.70e-08,58;CL:0000056,2.70e-08,58;CL:0000355,2.70e-08,58;CL:0000222,1.33e-07,121;CL:0000393,1.53e-07,61;CL:0000211,1.53e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;4.63e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!7.67e-07!14 | |ontology_enrichment_disease=DOID:2394!7.67e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;1.19e-18;25!UBERON:0000948;3.28e-15;22!UBERON:0001637;6.15e-10;42!UBERON:0003509;6.15e-10;42!UBERON:0004572;6.15e-10;42!UBERON:0004573;6.41e-08;33!UBERON:0004571;6.41e-08;33!UBERON:0007500;1.89e-07;56!UBERON:0001981;1.89e-07;56!UBERON:0004537;1.89e-07;56!UBERON:0000160;6.18e-07;17!UBERON:0005409;6.50e-07;22 | |||
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| ||
|short_description=p4@GATA6 | |short_description=p4@GATA6 | ||
}} | }} |
Latest revision as of 22:39, 18 September 2015
Short description: | p4@GATA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GATA6_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000269216_5end |
EntrezGene: | GATA6 |
HGNC: | 4174 |
UniProt: | Q92908 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.65e-13 | 32 |
smooth muscle cell | 6.29e-10 | 43 |
smooth muscle myoblast | 6.29e-10 | 43 |
muscle cell | 3.84e-09 | 55 |
cardiocyte | 1.97e-08 | 16 |
muscle precursor cell | 2.70e-08 | 58 |
myoblast | 2.70e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.70e-08 | 58 |
mesodermal cell | 1.33e-07 | 121 |
electrically responsive cell | 1.53e-07 | 61 |
electrically active cell | 1.53e-07 | 61 |