FFCP PHASE1:Hg19::chrX:2746944..2746960,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8908 | |EntrezGene=8908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4700 | |HGNC=4700 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000381161_5end | |association_with_transcript=0bp_to_ENST00000381161_5end | ||
|cluster_id=chrX:2746944..2746960,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_3_at_GYG2_5end | |description=CAGE_peak_3_at_GYG2_5end | ||
|id=chrX:2746944..2746960,+ | |id=chrX:2746944..2746960,+ | ||
|ontology_enrichment_celltype=CL:0000325!2.58e-09!39;CL:0000133!4.35e-09!59;CL:0000147!1.15e-08!14;CL:0000148!3.67e-08!10;CL:0000541!3.67e-08!10;CL:0000333!4.27e-07!41;CL:0000136!7.29e-07!15;CL:0000710!9.69e-07!20 | |ontology_enrichment_celltype=CL:0000325!2.58e-09!39;CL:0000133!4.35e-09!59;CL:0000147!1.15e-08!14;CL:0000148!3.67e-08!10;CL:0000541!3.67e-08!10;CL:0000333!4.27e-07!41;CL:0000136!7.29e-07!15;CL:0000710!9.69e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000136;7.96e-13;13!CL:0000147;2.23e-10;14!CL:0000148;9.37e-09;10!CL:0002563;8.83e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.42e-11,15;CL:0000147,2.28e-10,14;CL:0000148,8.38e-09,10;CL:0000541,8.38e-09,10;CL:0002563,8.47e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.42e-09;3!UBERON:0003057;8.42e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;6.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,6.86e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.68e-23!94;UBERON:0001016!2.68e-23!94;UBERON:0005743!8.93e-23!86;UBERON:0001017!1.67e-21!82;UBERON:0002346!5.72e-18!90;UBERON:0001049!2.72e-17!57;UBERON:0005068!2.72e-17!57;UBERON:0006241!2.72e-17!57;UBERON:0007135!2.72e-17!57;UBERON:0000955!5.01e-17!69;UBERON:0006238!5.01e-17!69;UBERON:0003075!5.95e-17!86;UBERON:0007284!5.95e-17!86;UBERON:0002616!5.04e-15!59;UBERON:0000924!3.78e-14!173;UBERON:0006601!3.78e-14!173;UBERON:0004121!2.86e-13!169;UBERON:0000033!1.03e-12!123;UBERON:0002020!2.40e-12!34;UBERON:0003528!2.40e-12!34;UBERON:0001893!9.83e-12!34;UBERON:0000153!1.26e-11!129;UBERON:0007811!1.26e-11!129;UBERON:0003056!1.46e-11!61;UBERON:0002791!1.53e-11!33;UBERON:0001869!1.19e-10!32;UBERON:0003080!3.21e-10!42;UBERON:0002780!1.45e-09!41;UBERON:0001890!1.45e-09!41;UBERON:0006240!1.45e-09!41;UBERON:0003076!4.03e-09!15;UBERON:0003057!4.03e-09!15;UBERON:0002619!7.28e-09!22;UBERON:0000956!1.07e-08!25;UBERON:0000203!1.07e-08!25;UBERON:0000475!1.30e-08!365;UBERON:0001950!6.67e-08!20;UBERON:0004732!1.36e-07!13;UBERON:0002298!4.05e-07!8;UBERON:0004733!8.65e-07!12;UBERON:0002028!8.65e-07!12;UBERON:0007277!8.65e-07!12;UBERON:0000119!9.05e-07!312 | |ontology_enrichment_uberon=UBERON:0000073!2.68e-23!94;UBERON:0001016!2.68e-23!94;UBERON:0005743!8.93e-23!86;UBERON:0001017!1.67e-21!82;UBERON:0002346!5.72e-18!90;UBERON:0001049!2.72e-17!57;UBERON:0005068!2.72e-17!57;UBERON:0006241!2.72e-17!57;UBERON:0007135!2.72e-17!57;UBERON:0000955!5.01e-17!69;UBERON:0006238!5.01e-17!69;UBERON:0003075!5.95e-17!86;UBERON:0007284!5.95e-17!86;UBERON:0002616!5.04e-15!59;UBERON:0000924!3.78e-14!173;UBERON:0006601!3.78e-14!173;UBERON:0004121!2.86e-13!169;UBERON:0000033!1.03e-12!123;UBERON:0002020!2.40e-12!34;UBERON:0003528!2.40e-12!34;UBERON:0001893!9.83e-12!34;UBERON:0000153!1.26e-11!129;UBERON:0007811!1.26e-11!129;UBERON:0003056!1.46e-11!61;UBERON:0002791!1.53e-11!33;UBERON:0001869!1.19e-10!32;UBERON:0003080!3.21e-10!42;UBERON:0002780!1.45e-09!41;UBERON:0001890!1.45e-09!41;UBERON:0006240!1.45e-09!41;UBERON:0003076!4.03e-09!15;UBERON:0003057!4.03e-09!15;UBERON:0002619!7.28e-09!22;UBERON:0000956!1.07e-08!25;UBERON:0000203!1.07e-08!25;UBERON:0000475!1.30e-08!365;UBERON:0001950!6.67e-08!20;UBERON:0004732!1.36e-07!13;UBERON:0002298!4.05e-07!8;UBERON:0004733!8.65e-07!12;UBERON:0002028!8.65e-07!12;UBERON:0007277!8.65e-07!12;UBERON:0000119!9.05e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.47e-10;6!UBERON:0002240;8.42e-09;3!UBERON:0005174;8.42e-09;3!UBERON:0001137;8.42e-09;3!UBERON:0004732;1.20e-08;13!UBERON:0001896;6.19e-08;3!UBERON:0005290;6.19e-08;3!UBERON:0004733;6.37e-07;12!UBERON:0002028;6.37e-07;12!UBERON:0001242;8.83e-07;4!UBERON:0001262;8.83e-07;4!UBERON:0004786;8.83e-07;4!UBERON:0004808;8.83e-07;4!UBERON:0001277;8.83e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.43e-12,15;UBERON:0003057,1.43e-12,15;UBERON:0002298,7.75e-11,6;UBERON:0002240,6.45e-09,3;UBERON:0005174,6.45e-09,3;UBERON:0001137,6.45e-09,3;UBERON:0004732,6.54e-09,13;UBERON:0001896,1.84e-08,3;UBERON:0005290,1.84e-08,3;UBERON:0010096,1.84e-08,3;UBERON:0004733,3.99e-07,12;UBERON:0002028,3.99e-07,12;UBERON:0007277,3.99e-07,12;UBERON:0001242,8.47e-07,4;UBERON:0001262,8.47e-07,4;UBERON:0004786,8.47e-07,4;UBERON:0004808,8.47e-07,4;UBERON:0001277,8.47e-07,4;UBERON:0000966,9.62e-07,6;UBERON:0005388,9.62e-07,6;UBERON:0001802,9.62e-07,6 | |||
|phase1_expression=0.181678379270557,2.78330681058278,0.422863212287913,0,0.893922188854576,1.74467704820074,2.53299878168311,0,2.87304191019822,0,2.09340350391728,0,0.263766978228454,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0,0.738726348460727,0.204000691244253,0.940364164434263,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.12786256184353,0,0,0.144846518960824,0,0,0.567208902984407,0.443458794925128,0.527008714158756,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.397227542439656,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0.30648779579902,0.751190294532984,0,0,0.427114777637135,0,0,0.206105058476878,0,0,0,0.194874010322397,0,0.368199594569197,0.484938170456436,0.710019185033229,0.503760491138201,0,0,0,0,0.975789649036763,1.85541675650079,0.929551542956147,1.45125477021519,2.52320850875628,2.18986415445498,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0.8231480226628,0,1.26755034821831,0,2.36315962672562,0,0.614942192715568,0.343135620597051,0,0,0,0,0.977424915930974,0,0,0.579652024875384,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07946420296687,0.381988425558278,4.68869788840188,1.71072446022705,0.925447434329912,0.901029173531752,1.71495859578347,0.112131084345361,0.43596006883328,0,1.55126058909333,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0.710783897485092,0,1.80863626235752,0.871533458600294,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0.773288812777695,0.335032530668698,0,0,0,0,0.613457458595699,0,0.542530047399471,0.207970861530807,0,0.473107245101804,0.35142424497814,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0.512556597022804,0,0,1.48418066444991,0.308419387605311,0.177561725313127,0.0821271560138091,0,1.16210378459959,0.362578348774867,0,0,0.459257792658427,0.546273504020151,0.262248829918848,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,1.28225062558195,1.31205858279882,0,0.618246069886334,4.57847324091717,2.7228134973794,0,0,0,0.386682873168488,0.154048617114644,0.15350367472613,0.413509717453592,0.214840489736547,0.290033387828457,0.255679882248303,0.890320356467374,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.589062011728432,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.589494246078727,0,0.354761064070598,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0.307240764308458,0.447352215784832,0.166849141711909,0,0,0,0,0.33307196799782,0,0,1.31857361344705,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,1.26675244876796,0,0.276283915531148,2.51932747854276,0.613612095012929,0,0.622079175323615,0,0.179021174675609,0,0,0,0,0,0.278304294485554,0,0,0,3.62499787717397,0,1.27126825146383,0,0,0.874813840149763,0.520874984799877,1.77148277162768,0.60298219312704,0,0.442317039724898,1.18219047581419,0.438770794307945,0,0.278847488557207,0.307801034015188,1.36730467016401,1.61394733071642,2.15418346583453,0.869178975376065,0,0.183195186803725,0,0,0,0.332423363800313,0.451191321234361,0.19606253431774,0,0,0,0.210998064528027,0,1.55488378577335,3.02944095638928,0,0.176915129006678,1.83309043480088,0,0,0,0.943615861729479,0,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,1.21491816834592,0,0,0.52418000472609,0,0,0,0,0,0.882561266915003,0.451961481561065,0,0,0.253243183823515,0.391102765469606,0,0.213452994739353,0.599428828746391,1.29681375438695,0,0.686379991447858,0,0.621262677827163,2.12124631155116,0.815425236441684,0.941425616810999,0.305994652908965,0.577901179803038,0.600420288709789,0,0,0.859530882839914,0,0,0,0,0,0,0,0.201550417460179,0.360299883542404,2.32991899054908,0.472699093843342,0.329663433524666,0.606631894687664,0.492137407573744,0,1.59045937961861,0.408610218334727,0.643012593860077,3.30094647833361,1.24632101408756,0,0,0.425246896606173,0,0.0788057072991982,0.262272940674991,0.105600336519406,0.35857467866569,0,0,0,0,0,0,0,0,0,1.5334921960688,0.339936274560377,0.439656701034247,0,2.84422503995411,1.45455861916959,1.02652102730598,0,0,0.471612915298998,0,0,0,0,0,13.0564272808674,8.27276650274911,14.3982421078827,10.1640515520039,0.157054096250234,0,0.610131324509816,0.876336514945499,1.72022758707021,1.77486482458964,1.73869928235874,0.415045904808692,0.124980407962107,4.549473526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| ||
|short_description=p3@GYG2 | |short_description=p3@GYG2 | ||
}} | }} |
Latest revision as of 19:38, 24 September 2015
Short description: | p3@GYG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GYG2_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000381161_5end |
EntrezGene: | GYG2 |
HGNC: | 4700 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.42e-11 | 15 |
pigment cell | 2.28e-10 | 14 |
melanocyte | 8.38e-09 | 10 |
melanoblast | 8.38e-09 | 10 |
intestinal epithelial cell | 8.47e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 1.43e-12 | 15 |
chordal neural plate | 1.43e-12 | 15 |
brainstem | 7.75e-11 | 6 |
spinal cord | 6.45e-09 | 3 |
dorsal region element | 6.45e-09 | 3 |
dorsum | 6.45e-09 | 3 |
segmental subdivision of nervous system | 6.54e-09 | 13 |
medulla oblongata | 1.84e-08 | 3 |
myelencephalon | 1.84e-08 | 3 |
future myelencephalon | 1.84e-08 | 3 |
segmental subdivision of hindbrain | 3.99e-07 | 12 |
hindbrain | 3.99e-07 | 12 |
presumptive hindbrain | 3.99e-07 | 12 |
intestinal mucosa | 8.47e-07 | 4 |
wall of intestine | 8.47e-07 | 4 |
gastrointestinal system mucosa | 8.47e-07 | 4 |
gastrointestinal system epithelium | 8.47e-07 | 4 |
intestinal epithelium | 8.47e-07 | 4 |
retina | 9.62e-07 | 6 |
photoreceptor array | 9.62e-07 | 6 |
posterior segment of eyeball | 9.62e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
melanoma | 6.86e-07 | 2 |