FFCP PHASE1:Hg19::chrX:26933473..26933478,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:26933473..26933478,+ | |||
|coexpression_cluster_id=C1203 | |||
|description=CAGE_peak_at_chrX:26933473..26933478,+ | |description=CAGE_peak_at_chrX:26933473..26933478,+ | ||
|id=chrX:26933473..26933478,+ | |id=chrX:26933473..26933478,+ | ||
|ontology_enrichment_celltype=CL:0000071!8.11e-84!18;CL:0002546!8.11e-84!18;CL:0002139!2.18e-62!24;CL:0000115!3.66e-42!35;CL:0002078!1.79e-38!44;CL:0002543!1.27e-37!6;CL:0002144!2.26e-28!3;CL:1000413!8.90e-26!9;CL:0002544!2.93e-25!6;CL:0000213!4.23e-25!57;CL:0000215!4.23e-25!57;CL:0000076!6.59e-23!62;CL:0000222!1.88e-19!119;CL:0002618!8.35e-13!3;CL:0000220!7.41e-08!246;CL:0002321!9.04e-08!248 | |ontology_enrichment_celltype=CL:0000071!8.11e-84!18;CL:0002546!8.11e-84!18;CL:0002139!2.18e-62!24;CL:0000115!3.66e-42!35;CL:0002078!1.79e-38!44;CL:0002543!1.27e-37!6;CL:0002144!2.26e-28!3;CL:1000413!8.90e-26!9;CL:0002544!2.93e-25!6;CL:0000213!4.23e-25!57;CL:0000215!4.23e-25!57;CL:0000076!6.59e-23!62;CL:0000222!1.88e-19!119;CL:0002618!8.35e-13!3;CL:0000220!7.41e-08!246;CL:0002321!9.04e-08!248 | ||
|ontology_enrichment_celltype_v019=CL:0002544;6.91e-50;6!CL:0000071;6.64e-46;18!CL:0002139;1.29e-34;24!CL:1000413;1.31e-33;9!CL:0002078;1.12e-16;45!CL:0000115;2.41e-16;36!CL:0000213;2.07e-12;58!CL:0000215;2.07e-12;58!CL:0002144;2.31e-12;3!CL:0000515;2.31e-12;3!CL:0000056;1.32e-09;4!CL:0000076;2.33e-07;63!CL:0002543;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002544,6.35e-50,6;CL:0000071,6.05e-46,18;CL:0002546,6.05e-46,18;CL:0002139,1.20e-34,24;CL:1000413,1.24e-33,9;CL:0000115,2.54e-23,36;CL:0002078,8.89e-19,45;CL:0000213,1.09e-14,58;CL:0000215,1.09e-14,58;CL:0000076,1.45e-13,63;CL:0002144,2.31e-12,3;CL:0000222,3.06e-10,121;CL:0000515,1.44e-09,4;CL:0002543,8.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;6.64e-46;18!CL:0000515;1.32e-09;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;6.64e-46;18!UBERON:0001986;6.64e-46;18!UBERON:0004852;6.64e-46;18!UBERON:0000487;1.07e-37;22!UBERON:0003915;1.31e-33;9!UBERON:0004700;1.31e-33;9!UBERON:0001917;1.31e-33;9!UBERON:0006914;2.93e-33;25!UBERON:0000490;6.83e-26;33!UBERON:0000947;6.38e-15;21!UBERON:0010191;6.38e-15;21!UBERON:0010523;2.31e-12;3!UBERON:0001915;2.31e-12;3!UBERON:0001982;2.31e-12;3!UBERON:0007500;2.48e-11;56!UBERON:0001981;2.48e-11;56!UBERON:0004537;2.48e-11;56!UBERON:0004573;3.78e-10;33!UBERON:0004571;3.78e-10;33!UBERON:0001637;4.34e-09;42!UBERON:0003509;4.34e-09;42!UBERON:0004572;4.34e-09;42!UBERON:0000055;1.34e-07;65 | |||
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|short_description=p@chrX:26933473..26933478,+ | |short_description=p@chrX:26933473..26933478,+ | ||
}} | }} |
Latest revision as of 07:40, 1 August 2015
Short description: | p@chrX:26933473..26933478, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:26933473..26933478, + |
Coexpression cluster: | C1203_Endothelial_placenta_choriocarcinoma_Renal_Hair_Fibroblast_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic endothelial cell | 6.35e-50 | 6 |
blood vessel endothelial cell | 6.05e-46 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.05e-46 | 18 |
endothelial cell of vascular tree | 1.20e-34 | 24 |
endothelial cell of artery | 1.24e-33 | 9 |
endothelial cell | 2.54e-23 | 36 |
meso-epithelial cell | 8.89e-19 | 45 |
lining cell | 1.09e-14 | 58 |
barrier cell | 1.09e-14 | 58 |
squamous epithelial cell | 1.45e-13 | 63 |
capillary endothelial cell | 2.31e-12 | 3 |
mesodermal cell | 3.06e-10 | 121 |
skeletal muscle myoblast | 1.44e-09 | 4 |
vein endothelial cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.05e-46 | 18 |
endothelium | 6.05e-46 | 18 |
cardiovascular system endothelium | 6.05e-46 | 18 |
simple squamous epithelium | 9.92e-38 | 22 |
endothelial tube | 1.24e-33 | 9 |
arterial system endothelium | 1.24e-33 | 9 |
endothelium of artery | 1.24e-33 | 9 |
squamous epithelium | 2.74e-33 | 25 |
aorta | 6.23e-15 | 21 |
aortic system | 6.23e-15 | 21 |
epithelial tube open at both ends | 1.89e-14 | 59 |
blood vessel | 1.89e-14 | 59 |
blood vasculature | 1.89e-14 | 59 |
vascular cord | 1.89e-14 | 59 |
vessel | 1.33e-12 | 68 |
microcirculatory vessel | 2.31e-12 | 3 |
endothelium of capillary | 2.31e-12 | 3 |
capillary | 2.31e-12 | 3 |
vasculature | 4.79e-11 | 78 |
vascular system | 4.79e-11 | 78 |
splanchnic layer of lateral plate mesoderm | 2.09e-10 | 83 |
systemic artery | 8.77e-10 | 33 |
systemic arterial system | 8.77e-10 | 33 |
unilaminar epithelium | 1.95e-08 | 148 |
cardiovascular system | 5.11e-08 | 109 |
artery | 7.76e-08 | 42 |
arterial blood vessel | 7.76e-08 | 42 |
arterial system | 7.76e-08 | 42 |
circulatory system | 8.20e-08 | 112 |
epithelial tube | 1.71e-07 | 117 |