FFCP PHASE1:Hg19::chrX:153305877..153305884,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4204 | |EntrezGene=4204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6990 | |HGNC=6990 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-323bp_to_ENST00000481807_5end | |association_with_transcript=-323bp_to_ENST00000481807_5end | ||
|cluster_id=chrX:153305877..153305884,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_10_at_MECP2_5end | |description=CAGE_peak_10_at_MECP2_5end | ||
|id=chrX:153305877..153305884,- | |id=chrX:153305877..153305884,- | ||
|ontology_enrichment_celltype=CL:0002057!3.14e-76!42;CL:0000860!1.59e-70!45;CL:0000766!1.44e-53!76;CL:0002194!6.65e-53!63;CL:0000576!6.65e-53!63;CL:0000040!6.65e-53!63;CL:0000559!6.65e-53!63;CL:0002009!5.25e-51!65;CL:0000839!1.67e-49!70;CL:0000557!1.12e-48!71;CL:0000763!4.42e-35!112;CL:0000049!4.42e-35!112;CL:0000738!2.27e-34!140;CL:0002087!3.53e-34!119;CL:0002031!1.79e-30!124;CL:0000037!2.64e-27!172;CL:0000566!2.64e-27!172;CL:0002032!6.30e-26!165;CL:0000837!6.30e-26!165;CL:0000988!3.52e-25!182;CL:0000134!1.26e-13!358;CL:0002320!4.05e-13!365;CL:0000219!2.43e-11!390;CL:0000034!3.16e-11!444;CL:0000048!1.55e-10!430;CL:0000723!3.27e-10!436;CL:0000767!5.84e-10!3 | |ontology_enrichment_celltype=CL:0002057!3.14e-76!42;CL:0000860!1.59e-70!45;CL:0000766!1.44e-53!76;CL:0002194!6.65e-53!63;CL:0000576!6.65e-53!63;CL:0000040!6.65e-53!63;CL:0000559!6.65e-53!63;CL:0002009!5.25e-51!65;CL:0000839!1.67e-49!70;CL:0000557!1.12e-48!71;CL:0000763!4.42e-35!112;CL:0000049!4.42e-35!112;CL:0000738!2.27e-34!140;CL:0002087!3.53e-34!119;CL:0002031!1.79e-30!124;CL:0000037!2.64e-27!172;CL:0000566!2.64e-27!172;CL:0002032!6.30e-26!165;CL:0000837!6.30e-26!165;CL:0000988!3.52e-25!182;CL:0000134!1.26e-13!358;CL:0002320!4.05e-13!365;CL:0000219!2.43e-11!390;CL:0000034!3.16e-11!444;CL:0000048!1.55e-10!430;CL:0000723!3.27e-10!436;CL:0000767!5.84e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.91e-96;33!CL:0002057;3.91e-96;33!CL:0000473;4.37e-65;39!CL:0000234;4.37e-65;39!CL:0000576;1.61e-56;48!CL:0000766;8.13e-33;69!CL:0002087;1.90e-16;104!CL:0000763;5.85e-14;100!CL:0002393;1.63e-12;6!CL:0002397;1.63e-12;6!CL:0000738;2.21e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.69e-106,42;CL:0002057,6.69e-106,42;CL:0000473,3.03e-92,48;CL:0000234,3.03e-92,48;CL:0002194,4.06e-73,59;CL:0000576,4.06e-73,59;CL:0000040,4.06e-73,59;CL:0000559,4.06e-73,59;CL:0002009,1.20e-70,61;CL:0000839,4.04e-65,66;CL:0000557,4.12e-64,67;CL:0000766,1.75e-59,72;CL:0000763,1.13e-38,108;CL:0000049,1.13e-38,108;CL:0002087,4.00e-36,115;CL:0002031,1.75e-34,120;CL:0000738,4.94e-30,136;CL:0002032,7.84e-25,161;CL:0000837,7.84e-25,161;CL:0000037,1.19e-23,168;CL:0000988,2.88e-22,177;CL:0000134,3.11e-09,354;CL:0002320,5.60e-09,361;CL:0002393,1.45e-08,9;CL:0002397,1.45e-08,9;CL:0000219,4.49e-08,386;CL:0000034,1.73e-07,441;CL:0000048,5.78e-07,427;CL:0000723,8.23e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;8.28e-78;42!CL:0000049;1.91e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.59e-42!80;UBERON:0001474!1.39e-38!86;UBERON:0002390!3.96e-35!102;UBERON:0003061!3.96e-35!102;UBERON:0004765!1.99e-33!101;UBERON:0001434!1.99e-33!101;UBERON:0002193!4.05e-31!112;UBERON:0002405!1.67e-26!115;UBERON:0002204!8.88e-19!167;UBERON:0003081!3.29e-17!216;UBERON:0002384!1.98e-12!375 | |ontology_enrichment_uberon=UBERON:0002371!3.59e-42!80;UBERON:0001474!1.39e-38!86;UBERON:0002390!3.96e-35!102;UBERON:0003061!3.96e-35!102;UBERON:0004765!1.99e-33!101;UBERON:0001434!1.99e-33!101;UBERON:0002193!4.05e-31!112;UBERON:0002405!1.67e-26!115;UBERON:0002204!8.88e-19!167;UBERON:0003081!3.29e-17!216;UBERON:0002384!1.98e-12!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.26e-56,76;UBERON:0001474,6.75e-52,82;UBERON:0004765,5.02e-47,90;UBERON:0002405,2.06e-45,93;UBERON:0002390,6.11e-43,98;UBERON:0003061,6.11e-43,98;UBERON:0001434,5.09e-42,100;UBERON:0002193,1.13e-38,108;UBERON:0002204,8.19e-24,167;UBERON:0003081,5.96e-19,203;UBERON:0000926,7.26e-11,315;UBERON:0004120,7.26e-11,315;UBERON:0006603,7.26e-11,315;UBERON:0002384,1.25e-08,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,0,0,0,2.76997704265939,4.61252229181326,1.95309783644267,0,0,0,0.581592955118259,0.755751887377619,0.242584061187816,1.39457422143411,2.05583944010913,1.85823822537062,3.74000110018796,4.61089271752381,1.89185783910868,6.20542225325913,5.16387746867061,6.77132432971709,0.941211697713023,1.09162460023138,0.224723484445085,6.73384563215986,3.85114832491312,6.39337125799041,0.329851300186716,0.398927315243264,0,8.70627715885752,2.8369261234557,1.24564449799115,0.75374599577023,2.08593167368081,1.52032191293582,3.02699751316684,5.89244217580104,5.06339819905415,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,0,0,0,2.76997704265939,4.61252229181326,1.95309783644267,0,0,0,0.581592955118259,0.755751887377619,0.242584061187816,1.39457422143411,2.05583944010913,1.85823822537062,3.74000110018796,4.61089271752381,1.89185783910868,6.20542225325913,5.16387746867061,6.77132432971709,0.941211697713023,1.09162460023138,0.224723484445085,6.73384563215986,3.85114832491312,6.39337125799041,0.329851300186716,0.398927315243264,0,8.70627715885752,2.8369261234557,1.24564449799115,0.75374599577023,2.08593167368081,1.52032191293582,3.02699751316684,5.89244217580104,5.06339819905415,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@MECP2 | |short_description=p10@MECP2 | ||
}} | }} |
Latest revision as of 01:49, 20 September 2015
Short description: | p10@MECP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MECP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -323bp_to_ENST00000481807_5end |
EntrezGene: | MECP2 |
HGNC: | 6990 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.69e-106 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.69e-106 | 42 |
defensive cell | 3.03e-92 | 48 |
phagocyte | 3.03e-92 | 48 |
monopoietic cell | 4.06e-73 | 59 |
monocyte | 4.06e-73 | 59 |
monoblast | 4.06e-73 | 59 |
promonocyte | 4.06e-73 | 59 |
macrophage dendritic cell progenitor | 1.20e-70 | 61 |
myeloid lineage restricted progenitor cell | 4.04e-65 | 66 |
granulocyte monocyte progenitor cell | 4.12e-64 | 67 |
myeloid leukocyte | 1.75e-59 | 72 |
myeloid cell | 1.13e-38 | 108 |
common myeloid progenitor | 1.13e-38 | 108 |
nongranular leukocyte | 4.00e-36 | 115 |
hematopoietic lineage restricted progenitor cell | 1.75e-34 | 120 |
leukocyte | 4.94e-30 | 136 |
hematopoietic oligopotent progenitor cell | 7.84e-25 | 161 |
hematopoietic multipotent progenitor cell | 7.84e-25 | 161 |
hematopoietic stem cell | 1.19e-23 | 168 |
hematopoietic cell | 2.88e-22 | 177 |
mesenchymal cell | 3.11e-09 | 354 |
connective tissue cell | 5.60e-09 | 361 |
intermediate monocyte | 1.45e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.45e-08 | 9 |
motile cell | 4.49e-08 | 386 |
stem cell | 1.73e-07 | 441 |
multi fate stem cell | 5.78e-07 | 427 |
somatic stem cell | 8.23e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.26e-56 | 76 |
bone element | 6.75e-52 | 82 |
skeletal element | 5.02e-47 | 90 |
immune system | 2.06e-45 | 93 |
hematopoietic system | 6.11e-43 | 98 |
blood island | 6.11e-43 | 98 |
skeletal system | 5.09e-42 | 100 |
hemolymphoid system | 1.13e-38 | 108 |
musculoskeletal system | 8.19e-24 | 167 |
lateral plate mesoderm | 5.96e-19 | 203 |
mesoderm | 7.26e-11 | 315 |
mesoderm-derived structure | 7.26e-11 | 315 |
presumptive mesoderm | 7.26e-11 | 315 |
connective tissue | 1.25e-08 | 371 |