FFCP PHASE1:Hg19::chr17:63096940..63096949,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:63096940..63096949,+ | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_at_chr17:63096940..63096949,+ | |description=CAGE_peak_at_chr17:63096940..63096949,+ | ||
|id=chr17:63096940..63096949,+ | |id=chr17:63096940..63096949,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000159;2.22e-23;2!CL:0002553;7.02e-13;1!CL:0000313;7.88e-13;1!CL:0000319;2.46e-12;1!CL:0000047;8.52e-07;2!CL:0002363;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,1.78e-23,2;CL:0002553,7.03e-13,1;CL:0000313,7.89e-13,1;CL:0000319,1.96e-12,1 | |||
|ontology_enrichment_development_v019=CL:0000008;8.52e-07;2 | |||
|ontology_enrichment_disease=DOID:0050687!1.71e-08!143;DOID:305!2.38e-07!106 | |ontology_enrichment_disease=DOID:0050687!1.71e-08!143;DOID:305!2.38e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:2152;7.88e-13;1!DOID:6193;9.91e-13;1!DOID:3151;2.46e-12;1!DOID:3030;2.46e-12;1!DOID:5662;2.46e-12;1!DOID:3149;2.46e-12;1!DOID:3350;5.41e-07;2!DOID:4468;5.41e-07;2!DOID:3451;8.52e-07;2!DOID:4159;8.52e-07;2!DOID:0060122;8.52e-07;2!DOID:3307;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,7.89e-13,1;DOID:6193,8.85e-13,1;DOID:5662,1.40e-12,1;DOID:3151,1.75e-12,1;DOID:3149,1.75e-12,1;DOID:3030,1.96e-12,1;DOID:0050687,6.66e-08,143;DOID:3350,5.11e-07,2;DOID:4468,5.73e-07,2;DOID:3307,6.07e-07,2;DOID:3451,7.20e-07,2;DOID:4159,7.20e-07,2;DOID:0060122,7.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.71e-09!115;UBERON:0005911!1.80e-07!82;UBERON:0004119!3.12e-07!169;UBERON:0000925!3.12e-07!169;UBERON:0006595!3.12e-07!169;UBERON:0001007!3.52e-07!155;UBERON:0001555!3.52e-07!155;UBERON:0007026!3.52e-07!155;UBERON:0000062!4.06e-07!511;UBERON:0000033!4.17e-07!123;UBERON:0000153!4.35e-07!129;UBERON:0007811!4.35e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!9.71e-09!115;UBERON:0005911!1.80e-07!82;UBERON:0004119!3.12e-07!169;UBERON:0000925!3.12e-07!169;UBERON:0006595!3.12e-07!169;UBERON:0001007!3.52e-07!155;UBERON:0001555!3.52e-07!155;UBERON:0007026!3.52e-07!155;UBERON:0000062!4.06e-07!511;UBERON:0000033!4.17e-07!123;UBERON:0000153!4.35e-07!129;UBERON:0007811!4.35e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;7.88e-13;1!UBERON:0004909;4.82e-07;2!UBERON:0003566;8.52e-07;2!UBERON:0001777;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,7.89e-13,1;UBERON:0004909,4.83e-07,2 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0.309868802321207,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.283604451492204,0.221729397462564,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0.151357427644931,0,0,0.312160076830321,0,0,0,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0.57978255948989,0.818238361772504,0.860413786167011,0,0,0.348581828608555,0.518305275076852,0,0.36497735907583,0,0,0,0,0,0,0.337169380156203,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0.100528972411631,0,0.325808305310325,1.03993478527958,0,0.463721619900307,0,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0.845302752556,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.764628819135115,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0.459446800413919,0.507447609232169,0,0,0,0,0,0,0,0.640944426764839,0,0.735120647943095,0.557409525377156,0.577076851905779,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.561421621224659,0.146508179271894,0.36408156524854,0.222886768554957,0.568272293612826,0,0,0,0,0.422008249231538,0.667852230137435,0,0.422250816255987,0,0,0,0.20453736500431,0,0,0.269605053441981,0.179021174675609,0,0.591860433821602,0,0,0,0.185536196323703,0,0,0.0874599999961957,0.724999575434793,0,0.254253650292766,0,0.689486746482929,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.538651809526579,0,0,0.448788222048861,0.108647371922008,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,2.10998064528027,0,0.282706142867882,0,0,0.442287822516696,0,0,0,0,0.202203398942031,0,0,0.182454789215666,0.391329237864179,0,0.789168805698781,0,0,0.126373159256976,0.150323419414493,0.207376382794494,0,0.992975867626496,0.627865836814451,1.19472429772959,0.853828638089378,0,0.520679215005393,0.0979923974143777,0.0870592065804026,0.17472666824203,2.40780445460263,0,0,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.126621591911757,0.195551382734803,0.561111741760736,0,0.19980960958213,0.288180834308212,0,0.171594997861965,0,0.124252535565433,0,0,0,0.407992870545287,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0.446342914883745,0.0671834724867263,0,1.16495949527454,0.0787831823072236,0,0,0.590564889088493,0.0846733320657845,0,0.544813624446302,0.160753148465019,0.275078873194468,0,0.899895566206002,0,0.242998226632099,1.67717343799633,0,0.367182116944987,0.422401346077626,0.179287339332845,0.191915197319445,0,0,1.017074150619,0,0,0,0,0.082092520749339,0,1.69968137280189,0.732761168390412,0,0,0.92562821219883,0.171086837884329,0.704815022316672,0.320362237703084,0.157204305099666,0,0,0,1.46151118057075,0,0.544017803369474,0,0.612691153526923,0,0,0,0.122026264901963,0.250381861413,0.573409195690071,0.887432412294818,0.0620964029413835,0.138348634936231,0.874862855734746,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.779441235357554,2.39156712564054,0.654261577023377,0.655219697692825,1.47463745252232,0,0.19998739585493,0,0,0.567515953566836,0.920529751259204,0.139879507719444,0,0.511577485214607,0,1.10086159299127,0,0,0,0,0,0,0,11.2079904759966,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.490738592505128,0.353909170043221,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0.126831620387814,0,0.548257766857182,0.496211178389294,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,1.8863681038116,0.135939465953663,0.197318320688547,0.354581522651905,0.889851215136553,0.627944742804112,0,0,0,0.647782773655864,0,0.285906176706625,0,0.348724276104376,0.347716544605159,0,0,0.17071847709395,0.691259661814092,0.430227358820278,0,0,0,0,0,0,3.02009665854039,0.392600934460972,0.121917924982269,0,0.307988420568741,0,0,0.935757853848423,0.198950775161368,0,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0.458729283404541,0.143339583151451,1.10440093535229,0.135982980381829,0,0.5290268405154,0,0,0,0.378499274505237,0.437062287854782,0.633492505057185,0.305966489225945,0,0.0918948995348449,0,0,0,0,0.517164979309476,0,0,0.0645889098360061,0.186224142887574,0.112131862580613,0.445530107947154,0,0,0.342233301085281,0.336760265072938,0.143444410785353,0,0.325613074443898,0.106727345877715,1.9307228228694,0,0,0.366724332548599,0,0,0,0 | |phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0.309868802321207,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.283604451492204,0.221729397462564,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0.151357427644931,0,0,0.312160076830321,0,0,0,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0.57978255948989,0.818238361772504,0.860413786167011,0,0,0.348581828608555,0.518305275076852,0,0.36497735907583,0,0,0,0,0,0,0.337169380156203,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0.100528972411631,0,0.325808305310325,1.03993478527958,0,0.463721619900307,0,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0.845302752556,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.764628819135115,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0.459446800413919,0.507447609232169,0,0,0,0,0,0,0,0.640944426764839,0,0.735120647943095,0.557409525377156,0.577076851905779,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.561421621224659,0.146508179271894,0.36408156524854,0.222886768554957,0.568272293612826,0,0,0,0,0.422008249231538,0.667852230137435,0,0.422250816255987,0,0,0,0.20453736500431,0,0,0.269605053441981,0.179021174675609,0,0.591860433821602,0,0,0,0.185536196323703,0,0,0.0874599999961957,0.724999575434793,0,0.254253650292766,0,0.689486746482929,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.538651809526579,0,0,0.448788222048861,0.108647371922008,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,2.10998064528027,0,0.282706142867882,0,0,0.442287822516696,0,0,0,0,0.202203398942031,0,0,0.182454789215666,0.391329237864179,0,0.789168805698781,0,0,0.126373159256976,0.150323419414493,0.207376382794494,0,0.992975867626496,0.627865836814451,1.19472429772959,0.853828638089378,0,0.520679215005393,0.0979923974143777,0.0870592065804026,0.17472666824203,2.40780445460263,0,0,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.126621591911757,0.195551382734803,0.561111741760736,0,0.19980960958213,0.288180834308212,0,0.171594997861965,0,0.124252535565433,0,0,0,0.407992870545287,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0.446342914883745,0.0671834724867263,0,1.16495949527454,0.0787831823072236,0,0,0.590564889088493,0.0846733320657845,0,0.544813624446302,0.160753148465019,0.275078873194468,0,0.899895566206002,0,0.242998226632099,1.67717343799633,0,0.367182116944987,0.422401346077626,0.179287339332845,0.191915197319445,0,0,1.017074150619,0,0,0,0,0.082092520749339,0,1.69968137280189,0.732761168390412,0,0,0.92562821219883,0.171086837884329,0.704815022316672,0.320362237703084,0.157204305099666,0,0,0,1.46151118057075,0,0.544017803369474,0,0.612691153526923,0,0,0,0.122026264901963,0.250381861413,0.573409195690071,0.887432412294818,0.0620964029413835,0.138348634936231,0.874862855734746,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.779441235357554,2.39156712564054,0.654261577023377,0.655219697692825,1.47463745252232,0,0.19998739585493,0,0,0.567515953566836,0.920529751259204,0.139879507719444,0,0.511577485214607,0,1.10086159299127,0,0,0,0,0,0,0,11.2079904759966,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.490738592505128,0.353909170043221,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0.126831620387814,0,0.548257766857182,0.496211178389294,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,1.8863681038116,0.135939465953663,0.197318320688547,0.354581522651905,0.889851215136553,0.627944742804112,0,0,0,0.647782773655864,0,0.285906176706625,0,0.348724276104376,0.347716544605159,0,0,0.17071847709395,0.691259661814092,0.430227358820278,0,0,0,0,0,0,3.02009665854039,0.392600934460972,0.121917924982269,0,0.307988420568741,0,0,0.935757853848423,0.198950775161368,0,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0.458729283404541,0.143339583151451,1.10440093535229,0.135982980381829,0,0.5290268405154,0,0,0,0.378499274505237,0.437062287854782,0.633492505057185,0.305966489225945,0,0.0918948995348449,0,0,0,0,0.517164979309476,0,0,0.0645889098360061,0.186224142887574,0.112131862580613,0.445530107947154,0,0,0.342233301085281,0.336760265072938,0.143444410785353,0,0.325613074443898,0.106727345877715,1.9307228228694,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p@chr17:63096940..63096949,+ | |short_description=p@chr17:63096940..63096949,+ | ||
}} | }} |
Latest revision as of 19:58, 25 July 2015
Short description: | p@chr17:63096940..63096949, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:63096940..63096949, + |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 1.78e-23 | 2 |
lung fibroblast | 7.03e-13 | 1 |
serous secreting cell | 7.89e-13 | 1 |
mucus secreting cell | 1.96e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 7.89e-13 | 1 |
epithelium of gonad | 4.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 7.89e-13 | 1 |
epithelioid sarcoma | 8.85e-13 | 1 |
pleomorphic carcinoma | 1.40e-12 | 1 |
skin squamous cell carcinoma | 1.75e-12 | 1 |
keratoacanthoma | 1.75e-12 | 1 |
mucinous adenocarcinoma | 1.96e-12 | 1 |
cell type cancer | 6.66e-08 | 143 |
mesenchymal cell neoplasm | 5.11e-07 | 2 |
clear cell adenocarcinoma | 5.73e-07 | 2 |
teratoma | 6.07e-07 | 2 |
skin carcinoma | 7.20e-07 | 2 |
skin cancer | 7.20e-07 | 2 |
integumentary system cancer | 7.20e-07 | 2 |