FFCP PHASE1:Hg19::chr17:27434273..27434291,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:27434273..27434291,-
|short_description=p20@MYO18A
|description=CAGE_peak_20_at_MYO18A_5end
|association_with_transcript=0bp_to_ENST00000532143_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=399687 | |EntrezGene=399687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31104 | |HGNC=31104 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000532143_5end | |||
|cluster_id=chr17:27434273..27434291,- | |||
|description=CAGE_peak_20_at_MYO18A_5end | |||
|id=chr17:27434273..27434291,- | |||
|ontology_enrichment_celltype=CL:0002194!1.30e-34!63;CL:0000576!1.30e-34!63;CL:0000040!1.30e-34!63;CL:0000559!1.30e-34!63;CL:0000766!1.39e-34!76;CL:0002009!2.49e-33!65;CL:0000839!1.92e-30!70;CL:0000557!6.48e-30!71;CL:0000763!5.86e-26!112;CL:0000049!5.86e-26!112;CL:0000738!1.08e-17!140;CL:0002087!1.15e-17!119;CL:0000037!3.85e-16!172;CL:0000566!3.85e-16!172;CL:0002032!7.22e-15!165;CL:0000837!7.22e-15!165;CL:0000988!9.14e-15!182;CL:0002057!2.59e-14!42;CL:0002031!4.35e-14!124;CL:0000860!4.08e-13!45;CL:0002619!3.10e-11!3;CL:0000235!9.48e-09!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.32e-41;6!CL:0000473;2.02e-15;39!CL:0000234;2.02e-15;39!CL:0000771;4.18e-09;2!CL:0000763;3.56e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.06e-41,6;CL:0000766,5.69e-20,72;CL:0002194,9.44e-20,59;CL:0000576,9.44e-20,59;CL:0000040,9.44e-20,59;CL:0000559,9.44e-20,59;CL:0002009,4.31e-19,61;CL:0000839,1.30e-17,66;CL:0000557,2.42e-17,67;CL:0000473,3.87e-15,48;CL:0000234,3.87e-15,48;CL:0000763,4.41e-13,108;CL:0000049,4.41e-13,108;CL:0000738,3.27e-10,136;CL:0002087,7.76e-10,115;CL:0002031,2.15e-09,120;CL:0000771,4.02e-09,2;CL:0002032,1.77e-08,161;CL:0000837,1.77e-08,161;CL:0000037,4.39e-08,168;CL:0000988,1.27e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.24e-09;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.08e-28!112;UBERON:0002390!2.10e-27!102;UBERON:0003061!2.10e-27!102;UBERON:0002371!9.57e-26!80;UBERON:0002405!4.69e-25!115;UBERON:0001474!1.89e-23!86;UBERON:0004765!6.64e-19!101;UBERON:0001434!6.64e-19!101;UBERON:0003081!6.34e-12!216;UBERON:0002204!1.97e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.63e-21;3!UBERON:0004177;4.12e-13;5!UBERON:0005057;4.12e-13;5!UBERON:0002075;2.78e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.96e-21,3;UBERON:0004854,2.96e-21,3;UBERON:0009034,2.96e-21,3;UBERON:0002095,2.96e-21,3;UBERON:0004782,2.96e-21,3;UBERON:0003281,2.96e-21,3;UBERON:0009664,2.96e-21,3;UBERON:0002296,2.96e-21,3;UBERON:0005602,2.96e-21,3;UBERON:0001179,2.96e-21,3;UBERON:0006293,2.96e-21,3;UBERON:0002405,1.40e-18,93;UBERON:0002390,1.36e-17,98;UBERON:0003061,1.36e-17,98;UBERON:0002193,6.87e-16,108;UBERON:0002371,3.14e-15,76;UBERON:0001474,4.51e-14,82;UBERON:0004765,9.13e-13,90;UBERON:0001434,2.02e-11,100;UBERON:0004177,1.13e-09,7;UBERON:0005057,1.13e-09,7;UBERON:0000945,1.42e-08,8;UBERON:0010039,1.42e-08,8;UBERON:0002075,2.64e-08,18;UBERON:0003081,5.54e-08,203 | |||
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| ||
|short_description=p20@MYO18A | |||
}} | }} |
Latest revision as of 08:10, 19 September 2015
Short description: | p20@MYO18A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_MYO18A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000532143_5end |
EntrezGene: | MYO18A |
HGNC: | 31104 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.06e-41 | 6 |
myeloid leukocyte | 5.69e-20 | 72 |
monopoietic cell | 9.44e-20 | 59 |
monocyte | 9.44e-20 | 59 |
monoblast | 9.44e-20 | 59 |
promonocyte | 9.44e-20 | 59 |
macrophage dendritic cell progenitor | 4.31e-19 | 61 |
myeloid lineage restricted progenitor cell | 1.30e-17 | 66 |
granulocyte monocyte progenitor cell | 2.42e-17 | 67 |
defensive cell | 3.87e-15 | 48 |
phagocyte | 3.87e-15 | 48 |
myeloid cell | 4.41e-13 | 108 |
common myeloid progenitor | 4.41e-13 | 108 |
leukocyte | 3.27e-10 | 136 |
nongranular leukocyte | 7.76e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.15e-09 | 120 |
eosinophil | 4.02e-09 | 2 |
hematopoietic oligopotent progenitor cell | 1.77e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-08 | 161 |
hematopoietic stem cell | 4.39e-08 | 168 |
hematopoietic cell | 1.27e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.96e-21 | 3 |
gastrointestinal system mesentery | 2.96e-21 | 3 |
stomach region | 2.96e-21 | 3 |
mesentery | 2.96e-21 | 3 |
gastrointestinal system serosa | 2.96e-21 | 3 |
mesentery of stomach | 2.96e-21 | 3 |
gut mesentery | 2.96e-21 | 3 |
dorsal mesentery | 2.96e-21 | 3 |
dorsal mesogastrium | 2.96e-21 | 3 |
peritoneal cavity | 2.96e-21 | 3 |
spleen primordium | 2.96e-21 | 3 |
immune system | 1.40e-18 | 93 |
hematopoietic system | 1.36e-17 | 98 |
blood island | 1.36e-17 | 98 |
hemolymphoid system | 6.87e-16 | 108 |
bone marrow | 3.14e-15 | 76 |
bone element | 4.51e-14 | 82 |
skeletal element | 9.13e-13 | 90 |
skeletal system | 2.02e-11 | 100 |
hemopoietic organ | 1.13e-09 | 7 |
immune organ | 1.13e-09 | 7 |
stomach | 1.42e-08 | 8 |
food storage organ | 1.42e-08 | 8 |
viscus | 2.64e-08 | 18 |
lateral plate mesoderm | 5.54e-08 | 203 |