FFCP PHASE1:Hg19::chr17:27045405..27045419,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:27045405..27045419,-
|short_description=p15@RAB34
|description=CAGE_peak_15_at_RAB34_5end
|association_with_transcript=3bp_to_ENST00000430132_5end
|Entre...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83871 | |EntrezGene=83871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16519 | |HGNC=16519 | ||
|TSSclassifier=strong | |||
|UniProt=C9JY26 | |UniProt=C9JY26 | ||
|association_with_transcript=3bp_to_ENST00000430132_5end | |||
|cluster_id=chr17:27045405..27045419,- | |||
|description=CAGE_peak_15_at_RAB34_5end | |||
|id=chr17:27045405..27045419,- | |||
|ontology_enrichment_celltype=CL:0000055!7.88e-16!180;CL:0000183!6.30e-10!59;CL:0000393!2.31e-09!60;CL:0000211!2.31e-09!60;CL:0000680!5.96e-09!57;CL:0000056!5.96e-09!57;CL:0000355!5.96e-09!57;CL:0000187!9.84e-09!54 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.55e-26;5!CL:0002321;9.45e-12;15!CL:0002595;1.36e-09;5!CL:0000540;1.33e-08;6!CL:0000404;1.33e-08;6!CL:0000746;1.28e-07;3!CL:0000039;6.45e-07;7!CL:0000586;6.45e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.26e-26,5;CL:0002595,1.53e-09,5;CL:0000540,1.34e-08,6;CL:0000031,1.34e-08,6;CL:0000404,1.34e-08,6;CL:0000746,1.07e-07,3;CL:0000513,1.07e-07,3;CL:0000039,5.60e-07,7;CL:0000586,5.60e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;1.33e-08;6!CL:0000513;1.28e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.38e-07!61;UBERON:0002036!1.38e-07!61;UBERON:0003082!1.38e-07!61;UBERON:0000914!1.39e-07!83;UBERON:0002329!1.39e-07!83;UBERON:0003077!1.39e-07!83;UBERON:0003059!1.39e-07!83;UBERON:0007282!1.39e-07!83;UBERON:0009618!1.39e-07!83;UBERON:0007285!1.39e-07!83;UBERON:0002385!2.26e-07!63;UBERON:0001015!2.26e-07!63;UBERON:0000383!2.26e-07!63;UBERON:0000486!4.28e-07!82;UBERON:0004290!9.83e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.08e-10;8!UBERON:0003834;1.36e-09;5!UBERON:0001533;1.36e-09;5!UBERON:0000922;1.18e-08;49!UBERON:0003135;2.63e-07;11!UBERON:0003513;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.47e-10,8;UBERON:0003834,1.53e-09,5;UBERON:0001533,1.53e-09,5;UBERON:0003135,2.00e-07,11;UBERON:0003513,6.20e-07,7 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.123766352960047,1.32558950291166,0,0,0.730310090387373,2.92759679274304,0.61560529038394,0.204000691244253,0,0.286235987131057,0.684372125364421,0.376627918784408,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,0.511450247374121,0,0,0.144846518960824,0.795285947051099,0,0.472674085820339,0.443458794925128,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0.134710672069688,0.163461903113459,0.454072282934794,0.576175924479999,0.234321431833797,0.312160076830321,0,0,0,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0.877955241761676,0.30648779579902,0.150238058906597,0.453728732640084,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.558350568994769,0,0.292311015483596,0,0.0920498986422993,1.45481451136931,0.710019185033229,0,0.339121184620975,0.193260853163297,0,0,4.39105342066543,2.91565490307268,4.99633954338929,2.38420426535352,5.55105871926382,0.72995471815166,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0,0.330881918197182,0.435758888184812,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0.901029173531752,0,0.336393253036082,0.87192013766656,0.4400297149257,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0.479249710983165,1.14861935834114,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.50051156317903,0,0.623912584592421,0,0.157702415033935,0,0.902838299183157,0,0,0.664225598535437,0.368738337083406,0.260650843404249,0.587403472388222,0.686286847621712,0,0,0,0.303127571446259,0,0,0,0,0.841980283299221,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.290012154876366,0,0.460511024178389,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.534192213880424,0.165284915360978,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0,0.616067160352178,0,0.869932992075073,0.37064843820784,0.572499546967965,0,0,0.190630193923825,0.511795582622668,0.42793898803392,0,1.56989728039846,0.359744915166629,0.274537029736055,0.117812402345686,0.606547444719948,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.565621727814851,0,1.10273068709225,3.3171948762061,2.63070531152258,0.578775534266688,0.655894752046633,0.405820753925408,0.6196469961995,0.281695602532241,0,0,0,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0.245040215981032,0,0.144269212976445,0.284567373393656,0,0,0,0.211673582723883,0.973865820823666,0.280797178113459,0.456469358066384,0,0,0.846458889008016,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0.811367035427949,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0.296964680832639,0,0,0,0.556543525114529,0.329607748453519,2.53350489753592,0.597743964753209,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0.158936578980379,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,1.20990716048664,0,0.189559738885464,0.450970258243478,0.103688191397247,0,0.661983911750998,0,0,0.284609546029793,0.138674673013139,4.85967267338367,0,0,0,0.687944129886466,0.483781656445426,0.292357268344742,0.410577285266046,0,0,0,0.274083849293502,0,0.126621591911757,0.195551382734803,0,0.640358984218058,0.19980960958213,0.144090417154106,0.687219576995494,0,0.14405479798815,0.124252535565433,0,0,0,0.407992870545287,0,0,0,0,0,1.31443677139657,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,7.07313853246084,7.15205070305616,6.64704540846696,0,0,0.0607495566580247,0,0.0788057072991982,1.15400093896996,0.422401346077626,0.35857467866569,0,0,0,2.28841683889275,0,0,0,0,0,0.170388021785422,0.906496732161005,0,0,0.258565912723101,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0.151649117541648,0,0,0.468334905806882,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0,0,0.151230923763239,0.621748802331122,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0.343395705182793,0,1.26184898228651,0.192619830407303,0.428883182749851,2.08795433572169,0,0,0,0.358177682162975,0.308801447160972,0,0.353378291891762,0.38582807654183,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.539124056983409,0,0,0.169732529954025,0,0.495743057036009,0,0.318004350653419,0.0788617450012534,0,1.05802783107205,1.2249819094128,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0.381382095467167,0.690359926060101,0.198916222116275,0.601682626794058,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0,0.313972371402056,0.314231179832004,0,0,0.215927591218621,0,0.214429632529969,0,3.02227705957126,0.869291361512897,0,0,0,0,0,0.354996002191696,0.170426809518315,1.69354820076372,0.22910686854405,0,0,0.111855431797792,0,0.853425474875886,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0.0771741581079447,0.874238242015829,0,0,0,0,0,0,0.169927114687817,0,0.128915775947154,0,0.178553938605658,0,0.320965466756673,0,0,0,0.631086248772738,0,0,1.0580536810308,0,0,0,0.126166424835079,1.31118686356435,0.380095503034311,2.54972074354954,2.13773924212448,0.0918948995348449,1.75495277504663,0,0.267964130156178,0,0,0,0.23806443146374,0.0645889098360061,0.124149428591716,0.112131862580613,0,0,0,0.342233301085281,0,0.0717222053926763,0,0.651226148887796,0.533636729388577,0,0.179650404213174,0,0,1.22068853494722,0,0,0 | |phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.123766352960047,1.32558950291166,0,0,0.730310090387373,2.92759679274304,0.61560529038394,0.204000691244253,0,0.286235987131057,0.684372125364421,0.376627918784408,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,0.511450247374121,0,0,0.144846518960824,0.795285947051099,0,0.472674085820339,0.443458794925128,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0.134710672069688,0.163461903113459,0.454072282934794,0.576175924479999,0.234321431833797,0.312160076830321,0,0,0,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0.877955241761676,0.30648779579902,0.150238058906597,0.453728732640084,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.558350568994769,0,0.292311015483596,0,0.0920498986422993,1.45481451136931,0.710019185033229,0,0.339121184620975,0.193260853163297,0,0,4.39105342066543,2.91565490307268,4.99633954338929,2.38420426535352,5.55105871926382,0.72995471815166,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0,0.330881918197182,0.435758888184812,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0.901029173531752,0,0.336393253036082,0.87192013766656,0.4400297149257,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0.479249710983165,1.14861935834114,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.50051156317903,0,0.623912584592421,0,0.157702415033935,0,0.902838299183157,0,0,0.664225598535437,0.368738337083406,0.260650843404249,0.587403472388222,0.686286847621712,0,0,0,0.303127571446259,0,0,0,0,0.841980283299221,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.290012154876366,0,0.460511024178389,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.534192213880424,0.165284915360978,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0,0.616067160352178,0,0.869932992075073,0.37064843820784,0.572499546967965,0,0,0.190630193923825,0.511795582622668,0.42793898803392,0,1.56989728039846,0.359744915166629,0.274537029736055,0.117812402345686,0.606547444719948,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.565621727814851,0,1.10273068709225,3.3171948762061,2.63070531152258,0.578775534266688,0.655894752046633,0.405820753925408,0.6196469961995,0.281695602532241,0,0,0,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0.245040215981032,0,0.144269212976445,0.284567373393656,0,0,0,0.211673582723883,0.973865820823666,0.280797178113459,0.456469358066384,0,0,0.846458889008016,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0.811367035427949,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0.296964680832639,0,0,0,0.556543525114529,0.329607748453519,2.53350489753592,0.597743964753209,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0.158936578980379,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,1.20990716048664,0,0.189559738885464,0.450970258243478,0.103688191397247,0,0.661983911750998,0,0,0.284609546029793,0.138674673013139,4.85967267338367,0,0,0,0.687944129886466,0.483781656445426,0.292357268344742,0.410577285266046,0,0,0,0.274083849293502,0,0.126621591911757,0.195551382734803,0,0.640358984218058,0.19980960958213,0.144090417154106,0.687219576995494,0,0.14405479798815,0.124252535565433,0,0,0,0.407992870545287,0,0,0,0,0,1.31443677139657,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,7.07313853246084,7.15205070305616,6.64704540846696,0,0,0.0607495566580247,0,0.0788057072991982,1.15400093896996,0.422401346077626,0.35857467866569,0,0,0,2.28841683889275,0,0,0,0,0,0.170388021785422,0.906496732161005,0,0,0.258565912723101,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.124192805882767,0.138348634936231,0,0.151649117541648,0,0,0.468334905806882,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0,0,0.151230923763239,0.621748802331122,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0.343395705182793,0,1.26184898228651,0.192619830407303,0.428883182749851,2.08795433572169,0,0,0,0.358177682162975,0.308801447160972,0,0.353378291891762,0.38582807654183,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.539124056983409,0,0,0.169732529954025,0,0.495743057036009,0,0.318004350653419,0.0788617450012534,0,1.05802783107205,1.2249819094128,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0.381382095467167,0.690359926060101,0.198916222116275,0.601682626794058,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0,0.313972371402056,0.314231179832004,0,0,0.215927591218621,0,0.214429632529969,0,3.02227705957126,0.869291361512897,0,0,0,0,0,0.354996002191696,0.170426809518315,1.69354820076372,0.22910686854405,0,0,0.111855431797792,0,0.853425474875886,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0.0771741581079447,0.874238242015829,0,0,0,0,0,0,0.169927114687817,0,0.128915775947154,0,0.178553938605658,0,0.320965466756673,0,0,0,0.631086248772738,0,0,1.0580536810308,0,0,0,0.126166424835079,1.31118686356435,0.380095503034311,2.54972074354954,2.13773924212448,0.0918948995348449,1.75495277504663,0,0.267964130156178,0,0,0,0.23806443146374,0.0645889098360061,0.124149428591716,0.112131862580613,0,0,0,0.342233301085281,0,0.0717222053926763,0,0.651226148887796,0.533636729388577,0,0.179650404213174,0,0,1.22068853494722,0,0,0 | ||
|short_description=p15@RAB34 | |||
}} | }} |
Latest revision as of 07:10, 19 September 2015
Short description: | p15@RAB34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RAB34_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000430132_5end |
EntrezGene: | RAB34 |
HGNC: | 16519 |
UniProt: | C9JY26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.26e-26 | 5 |
smooth muscle cell of the subclavian artery | 1.53e-09 | 5 |
neuron | 1.34e-08 | 6 |
neuroblast | 1.34e-08 | 6 |
electrically signaling cell | 1.34e-08 | 6 |
cardiac muscle cell | 1.07e-07 | 3 |
cardiac muscle myoblast | 1.07e-07 | 3 |
germ line cell | 5.60e-07 | 7 |
germ cell | 5.60e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.47e-10 | 8 |
thoracic segment blood vessel | 1.53e-09 | 5 |
subclavian artery | 1.53e-09 | 5 |
male reproductive organ | 2.00e-07 | 11 |
trunk blood vessel | 6.20e-07 | 7 |