FFCP PHASE1:Hg19::chrX:100662793..100662809,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2717 | |EntrezGene=2717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4296 | |HGNC=4296 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000493905_5end | |association_with_transcript=-9bp_to_ENST00000493905_5end | ||
|cluster_id=chrX:100662793..100662809,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_GLA_5end | |description=CAGE_peak_2_at_GLA_5end | ||
|id=chrX:100662793..100662809,- | |id=chrX:100662793..100662809,- | ||
|ontology_enrichment_celltype=CL:0000548!3.85e-37!679;CL:0000004!3.85e-37!679;CL:0000255!3.85e-37!679;CL:0000012!9.33e-37!682;CL:0000003!6.04e-28!722;CL:0000766!1.66e-25!76;CL:0000557!5.00e-24!71;CL:0002009!2.34e-23!65;CL:0002194!1.79e-22!63;CL:0000576!1.79e-22!63;CL:0000040!1.79e-22!63;CL:0000559!1.79e-22!63;CL:0000839!1.80e-22!70;CL:0000063!3.87e-22!578;CL:0000144!3.92e-21!625;CL:0000763!5.59e-20!112;CL:0000049!5.59e-20!112;CL:0000860!9.53e-20!45;CL:0002057!2.56e-18!42;CL:0002371!3.41e-18!591;CL:0000048!9.66e-11!430;CL:0000723!1.21e-10!436;CL:0000034!2.10e-10!444;CL:0000066!7.77e-10!254;CL:0000359!1.74e-08!32;CL:0002321!2.02e-08!248;CL:0000220!2.05e-08!246;CL:0000222!5.57e-08!119;CL:0000192!3.59e-07!42;CL:0000514!3.59e-07!42;CL:0000680!4.75e-07!57;CL:0000056!4.75e-07!57;CL:0000355!4.75e-07!57 | |ontology_enrichment_celltype=CL:0000548!3.85e-37!679;CL:0000004!3.85e-37!679;CL:0000255!3.85e-37!679;CL:0000012!9.33e-37!682;CL:0000003!6.04e-28!722;CL:0000766!1.66e-25!76;CL:0000557!5.00e-24!71;CL:0002009!2.34e-23!65;CL:0002194!1.79e-22!63;CL:0000576!1.79e-22!63;CL:0000040!1.79e-22!63;CL:0000559!1.79e-22!63;CL:0000839!1.80e-22!70;CL:0000063!3.87e-22!578;CL:0000144!3.92e-21!625;CL:0000763!5.59e-20!112;CL:0000049!5.59e-20!112;CL:0000860!9.53e-20!45;CL:0002057!2.56e-18!42;CL:0002371!3.41e-18!591;CL:0000048!9.66e-11!430;CL:0000723!1.21e-10!436;CL:0000034!2.10e-10!444;CL:0000066!7.77e-10!254;CL:0000359!1.74e-08!32;CL:0002321!2.02e-08!248;CL:0000220!2.05e-08!246;CL:0000222!5.57e-08!119;CL:0000192!3.59e-07!42;CL:0000514!3.59e-07!42;CL:0000680!4.75e-07!57;CL:0000056!4.75e-07!57;CL:0000355!4.75e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.21e-21;33!CL:0002057;1.21e-21;33!CL:0000473;2.13e-20;39!CL:0000234;2.13e-20;39!CL:0000576;9.09e-13;48!CL:0000766;5.75e-11;69!CL:0000359;5.52e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.87e-26,72;CL:0000557,1.74e-24,67;CL:0002009,1.02e-23,61;CL:0002194,9.82e-23,59;CL:0000576,9.82e-23,59;CL:0000040,9.82e-23,59;CL:0000559,9.82e-23,59;CL:0000839,1.99e-22,66;CL:0000473,9.07e-22,48;CL:0000234,9.07e-22,48;CL:0000860,6.07e-19,42;CL:0002057,6.07e-19,42;CL:0000763,7.89e-19,108;CL:0000049,7.89e-19,108;CL:0000359,1.72e-08,32;CL:0000723,2.49e-08,433;CL:0000048,3.02e-08,427;CL:0000066,7.11e-08,253;CL:0000034,7.39e-08,441;CL:0000222,6.05e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002057;3.10e-14;42 | |||
|ontology_enrichment_disease=DOID:305!2.33e-08!106 | |ontology_enrichment_disease=DOID:305!2.33e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.65e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000926!5.57e-23!448;UBERON:0004120!5.57e-23!448;UBERON:0006603!5.57e-23!448;UBERON:0002371!7.00e-23!80;UBERON:0002204!8.39e-22!167;UBERON:0001474!1.38e-20!86;UBERON:0002390!7.98e-20!102;UBERON:0003061!7.98e-20!102;UBERON:0004765!2.04e-19!101;UBERON:0001434!2.04e-19!101;UBERON:0003081!4.00e-19!216;UBERON:0002193!9.10e-18!112;UBERON:0002405!8.72e-12!115;UBERON:0001637!2.03e-09!42;UBERON:0003509!2.03e-09!42;UBERON:0004572!2.03e-09!42;UBERON:0004573!4.35e-08!33;UBERON:0004571!4.35e-08!33 | |ontology_enrichment_uberon=UBERON:0000926!5.57e-23!448;UBERON:0004120!5.57e-23!448;UBERON:0006603!5.57e-23!448;UBERON:0002371!7.00e-23!80;UBERON:0002204!8.39e-22!167;UBERON:0001474!1.38e-20!86;UBERON:0002390!7.98e-20!102;UBERON:0003061!7.98e-20!102;UBERON:0004765!2.04e-19!101;UBERON:0001434!2.04e-19!101;UBERON:0003081!4.00e-19!216;UBERON:0002193!9.10e-18!112;UBERON:0002405!8.72e-12!115;UBERON:0001637!2.03e-09!42;UBERON:0003509!2.03e-09!42;UBERON:0004572!2.03e-09!42;UBERON:0004573!4.35e-08!33;UBERON:0004571!4.35e-08!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.65e-07;42!UBERON:0003509;2.65e-07;42!UBERON:0004572;2.65e-07;42!UBERON:0004573;2.83e-07;33!UBERON:0004571;2.83e-07;33!UBERON:0001737;3.97e-07;9!UBERON:0001557;3.97e-07;9 | |||
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| ||
|short_description=p2@GLA | |short_description=p2@GLA | ||
}} | }} |
Latest revision as of 18:00, 18 September 2015
Short description: | p2@GLA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GLA_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -9bp_to_ENST00000493905_5end |
EntrezGene: | GLA |
HGNC: | 4296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.87e-26 | 72 |
granulocyte monocyte progenitor cell | 1.74e-24 | 67 |
macrophage dendritic cell progenitor | 1.02e-23 | 61 |
monopoietic cell | 9.82e-23 | 59 |
monocyte | 9.82e-23 | 59 |
monoblast | 9.82e-23 | 59 |
promonocyte | 9.82e-23 | 59 |
myeloid lineage restricted progenitor cell | 1.99e-22 | 66 |
defensive cell | 9.07e-22 | 48 |
phagocyte | 9.07e-22 | 48 |
classical monocyte | 6.07e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.07e-19 | 42 |
myeloid cell | 7.89e-19 | 108 |
common myeloid progenitor | 7.89e-19 | 108 |
vascular associated smooth muscle cell | 1.72e-08 | 32 |
somatic stem cell | 2.49e-08 | 433 |
multi fate stem cell | 3.02e-08 | 427 |
epithelial cell | 7.11e-08 | 253 |
stem cell | 7.39e-08 | 441 |
mesodermal cell | 6.05e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.78e-23 | 76 |
bone element | 5.81e-21 | 82 |
skeletal element | 6.94e-20 | 90 |
hematopoietic system | 7.80e-20 | 98 |
blood island | 7.80e-20 | 98 |
lateral plate mesoderm | 8.88e-20 | 203 |
musculoskeletal system | 3.00e-19 | 167 |
mesoderm | 1.82e-18 | 315 |
mesoderm-derived structure | 1.82e-18 | 315 |
presumptive mesoderm | 1.82e-18 | 315 |
hemolymphoid system | 4.74e-17 | 108 |
skeletal system | 8.30e-17 | 100 |
immune system | 7.38e-16 | 93 |
artery | 3.67e-10 | 42 |
arterial blood vessel | 3.67e-10 | 42 |
arterial system | 3.67e-10 | 42 |
systemic artery | 2.03e-08 | 33 |
systemic arterial system | 2.03e-08 | 33 |
larynx | 4.38e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.65e-08 | 106 |