FFCP PHASE1:Hg19::chr16:49890003..49890008,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:49890003..49890008,- | |||
|description=CAGE_peak_at_chr16:49890003..49890008,- | |description=CAGE_peak_at_chr16:49890003..49890008,- | ||
|id=chr16:49890003..49890008,- | |id=chr16:49890003..49890008,- | ||
|ontology_enrichment_celltype=CL:0002322!3.17e-10!5;CL:0002603!4.65e-07!3;CL:0000128!8.15e-07!7;CL:0000126!8.15e-07!7;CL:0000127!8.15e-07!7;CL:0002453!8.15e-07!7 | |ontology_enrichment_celltype=CL:0002322!3.17e-10!5;CL:0002603!4.65e-07!3;CL:0000128!8.15e-07!7;CL:0000126!8.15e-07!7;CL:0000127!8.15e-07!7;CL:0002453!8.15e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002603;1.79e-29;3!CL:0002322;1.85e-17;5!CL:0000128;5.38e-13;7!CL:0000126;5.38e-13;7!CL:0000039;5.38e-13;7!CL:0000127;5.38e-13;7!CL:0000586;5.38e-13;7!CL:0002319;1.02e-08;25!CL:0000540;3.57e-07;6!CL:0000404;3.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,2.18e-29,3;CL:0002322,1.25e-17,5;CL:0000039,4.97e-13,7;CL:0000586,4.97e-13,7;CL:0000128,5.85e-13,7;CL:0000126,5.85e-13,7;CL:0000127,5.85e-13,7;CL:0002453,5.85e-13,7;CL:0002319,1.07e-08,25;CL:0000540,3.68e-07,6;CL:0000031,3.68e-07,6;CL:0000404,3.68e-07,6;CL:0000133,6.68e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.67e-16;10!UBERON:0005564;8.67e-16;10!CL:0000031;3.57e-07;6 | |||
|ontology_enrichment_disease=DOID:3095!6.62e-16!22;DOID:2994!6.62e-16!22;DOID:171!4.98e-08!10 | |ontology_enrichment_disease=DOID:3095!6.62e-16!22;DOID:2994!6.62e-16!22;DOID:171!4.98e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:3095;7.88e-21;22!DOID:2994;7.88e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.21e-21,22;DOID:2994,7.21e-21,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.59e-15;6!UBERON:0000473;1.93e-11;8!UBERON:0002680;3.15e-10;9!UBERON:0001895;3.15e-10;9!UBERON:0003135;1.85e-08;11!UBERON:0004733;8.57e-08;12!UBERON:0002028;8.57e-08;12!UBERON:0000991;1.31e-07;21!UBERON:0004732;3.14e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.06e-15,6;UBERON:0006215,5.06e-15,6;UBERON:0000473,1.80e-11,8;UBERON:0002680,3.36e-10,9;UBERON:0001895,3.36e-10,9;UBERON:0010092,3.36e-10,9;UBERON:0003135,1.76e-08,11;UBERON:0004733,8.99e-08,12;UBERON:0002028,8.99e-08,12;UBERON:0007277,8.99e-08,12;UBERON:0000991,1.26e-07,21;UBERON:0009196,1.26e-07,21;UBERON:0009117,1.26e-07,21;UBERON:0005564,1.26e-07,21;UBERON:0004176,2.77e-07,22;UBERON:0004732,3.28e-07,13 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,2.95490539384291,1.02000345622126,2.5076377718247,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13441780596881,0.886917589850256,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0.732186172644509,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0.908144565869588,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,1.21973706129595,1.72288698817931,1.74290914304278,0.829288440122964,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0.234817388471643,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0.391602314925481,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844501632511974,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0.207376382794494,0,0,0,0,0,0,0.694238953340524,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0.196854963029498,0,0,0,1.60753148465019,1.10031549277787,0.415440338029185,0,0,0.0607495566580247,0,0,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895260599125562,0.754773679776773,0,0.873677105536111,0.169732529954025,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,2.28632617667507,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0.214429632529969,0,0,2.43401581223611,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0.647428837187895,0,1.1598144313382,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0.4226557275834,0,0,0.257831551894309,0,0,0,0,0,0,0,0.946629373159108,0,0,0.5290268405154,0,0,0,3.40649347054713,2.513108155165,1.39368351112581,2.44773191380756,2.13773924212448,1.8378979906969,0.752122617877125,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.488965776731466,0.406896178315738,0.665756774185513,0,0 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| ||
|short_description=p@chr16:49890003..49890008,- | |short_description=p@chr16:49890003..49890008,- | ||
}} | }} |
Latest revision as of 09:22, 25 July 2015
Short description: | p@chr16:49890003..49890008, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:49890003..49890008, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 2.18e-29 | 3 |
embryonic stem cell | 1.25e-17 | 5 |
germ line cell | 4.97e-13 | 7 |
germ cell | 4.97e-13 | 7 |
oligodendrocyte | 5.85e-13 | 7 |
macroglial cell | 5.85e-13 | 7 |
astrocyte | 5.85e-13 | 7 |
oligodendrocyte precursor cell | 5.85e-13 | 7 |
neural cell | 1.07e-08 | 25 |
neuron | 3.68e-07 | 6 |
neuroblast | 3.68e-07 | 6 |
electrically signaling cell | 3.68e-07 | 6 |
neurectodermal cell | 6.68e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.06e-15 | 6 |
rhombic lip | 5.06e-15 | 6 |
testis | 1.80e-11 | 8 |
regional part of metencephalon | 3.36e-10 | 9 |
metencephalon | 3.36e-10 | 9 |
future metencephalon | 3.36e-10 | 9 |
male reproductive organ | 1.76e-08 | 11 |
segmental subdivision of hindbrain | 8.99e-08 | 12 |
hindbrain | 8.99e-08 | 12 |
presumptive hindbrain | 8.99e-08 | 12 |
gonad | 1.26e-07 | 21 |
indifferent external genitalia | 1.26e-07 | 21 |
indifferent gonad | 1.26e-07 | 21 |
gonad primordium | 1.26e-07 | 21 |
external genitalia | 2.77e-07 | 22 |
segmental subdivision of nervous system | 3.28e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.21e-21 | 22 |
germ cell cancer | 7.21e-21 | 22 |