FFCP PHASE1:Hg19::chr17:1945301..1945344,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:1945301..1945344,+
|short_description=p1@OVCA2
|description=CAGE_peak_1_at_OVCA2_5end
|association_with_transcript=24bp_to_ENST00000263084,NM_080822,uc002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=124641 | |EntrezGene=124641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24203 | |HGNC=24203 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WZ82 | |UniProt=Q8WZ82 | ||
|association_with_transcript=24bp_to_ENST00000263084,NM_080822,uc002ftx.2_5end | |||
|cluster_id=chr17:1945301..1945344,+ | |||
|coexpression_cluster_id=C1636 | |||
|description=CAGE_peak_1_at_OVCA2_5end | |||
|id=chr17:1945301..1945344,+ | |||
|ontology_enrichment_celltype=CL:0000548!6.33e-32!679;CL:0000004!6.33e-32!679;CL:0000255!6.33e-32!679;CL:0000012!7.80e-31!682;CL:0002371!2.16e-30!591;CL:0000144!1.11e-28!625;CL:0000003!1.30e-27!722;CL:0000220!3.17e-21!246;CL:0002321!2.74e-20!248;CL:0000222!1.37e-19!119;CL:0000063!2.13e-14!578;CL:0000066!2.94e-13!254;CL:0000183!1.53e-12!59;CL:0000192!1.42e-11!42;CL:0000514!1.42e-11!42;CL:0000115!1.33e-10!35;CL:0000187!2.40e-10!54;CL:0000680!2.64e-10!57;CL:0000056!2.64e-10!57;CL:0000355!2.64e-10!57;CL:0000359!7.49e-10!32;CL:0002078!2.09e-09!44;CL:0000213!2.74e-09!57;CL:0000215!2.74e-09!57;CL:0000055!7.88e-09!180;CL:0002139!1.79e-08!24;CL:0000393!2.67e-08!60;CL:0000211!2.67e-08!60;CL:0000071!2.79e-08!18;CL:0002546!2.79e-08!18;CL:1000449!9.65e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.37e-09;36!CL:0000359;2.42e-09;32!CL:0000192;7.81e-09;43!CL:0002139;1.68e-08;24!CL:0000071;2.62e-08;18!CL:0002078;5.45e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.75e-21,250;CL:0000222,3.06e-20,121;CL:0000066,4.54e-13,253;CL:0000192,8.88e-12,43;CL:0000514,8.88e-12,43;CL:0000115,4.87e-11,36;CL:0000187,1.49e-10,55;CL:0000680,1.64e-10,58;CL:0000056,1.64e-10,58;CL:0000355,1.64e-10,58;CL:0000359,7.49e-10,32;CL:0002078,8.29e-10,45;CL:0000213,1.15e-09,58;CL:0000215,1.15e-09,58;CL:0000393,1.70e-08,61;CL:0000211,1.70e-08,61;CL:0002139,1.79e-08,24;CL:0000071,2.79e-08,18;CL:0002546,2.79e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000514;7.81e-09;43!CL:0002546;2.62e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.40e-16!448;UBERON:0004120!1.40e-16!448;UBERON:0006603!1.40e-16!448;UBERON:0002049!2.97e-15!79;UBERON:0007798!2.97e-15!79;UBERON:0000055!2.46e-14!69;UBERON:0003914!1.11e-13!118;UBERON:0003081!1.37e-13!216;UBERON:0004872!3.61e-13!84;UBERON:0001981!9.33e-13!60;UBERON:0007500!9.33e-13!60;UBERON:0004537!9.33e-13!60;UBERON:0006965!9.33e-13!60;UBERON:0000490!1.06e-12!138;UBERON:0001637!2.04e-12!42;UBERON:0003509!2.04e-12!42;UBERON:0004572!2.04e-12!42;UBERON:0004535!2.91e-11!110;UBERON:0001009!6.21e-11!113;UBERON:0005256!6.72e-11!143;UBERON:0003104!1.44e-10!238;UBERON:0009142!1.44e-10!238;UBERON:0000914!4.13e-10!83;UBERON:0002329!4.13e-10!83;UBERON:0003077!4.13e-10!83;UBERON:0003059!4.13e-10!83;UBERON:0007282!4.13e-10!83;UBERON:0009618!4.13e-10!83;UBERON:0007285!4.13e-10!83;UBERON:0000486!4.82e-10!82;UBERON:0004290!1.88e-09!70;UBERON:0002100!4.22e-09!216;UBERON:0004573!8.57e-09!33;UBERON:0004571!8.57e-09!33;UBERON:0001134!1.85e-08!61;UBERON:0002036!1.85e-08!61;UBERON:0003082!1.85e-08!61;UBERON:0001986!2.79e-08!18;UBERON:0004638!2.79e-08!18;UBERON:0004852!2.79e-08!18;UBERON:0002385!6.97e-08!63;UBERON:0001015!6.97e-08!63;UBERON:0000383!6.97e-08!63;UBERON:0000487!1.85e-07!22;UBERON:0002204!2.49e-07!167;UBERON:0004211!9.65e-07!16;UBERON:0001285!9.65e-07!16;UBERON:0007684!9.65e-07!16;UBERON:0003220!9.65e-07!16;UBERON:0004208!9.65e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.39e-09;42!UBERON:0003509;5.39e-09;42!UBERON:0004572;5.39e-09;42!UBERON:0007500;5.99e-09;56!UBERON:0001981;5.99e-09;56!UBERON:0004537;5.99e-09;56!UBERON:0003914;7.94e-09;74!UBERON:0004638;2.62e-08;18!UBERON:0001986;2.62e-08;18!UBERON:0004852;2.62e-08;18!UBERON:0004573;5.52e-08;33!UBERON:0004571;5.52e-08;33!UBERON:0000055;6.54e-08;65!UBERON:0000490;6.56e-08;33!UBERON:0000487;1.70e-07;22!UBERON:0002049;2.14e-07;75!UBERON:0007798;2.14e-07;75 | |||
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| ||
|short_description=p1@OVCA2 | |||
}} | }} |
Latest revision as of 00:22, 19 September 2015
Short description: | p1@OVCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OVCA2_5end |
Coexpression cluster: | C1636_Mesenchymal_Alveolar_Placental_Smooth_Fibroblast_Bronchial_Hair |
Association with transcript: | 24bp_to_ENST00000263084, NM_080822, uc002ftx.2_5end |
EntrezGene: | OVCA2 |
HGNC: | 24203 |
UniProt: | Q8WZ82 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.75e-21 | 250 |
mesodermal cell | 3.06e-20 | 121 |
epithelial cell | 4.54e-13 | 253 |
smooth muscle cell | 8.88e-12 | 43 |
smooth muscle myoblast | 8.88e-12 | 43 |
endothelial cell | 4.87e-11 | 36 |
muscle cell | 1.49e-10 | 55 |
muscle precursor cell | 1.64e-10 | 58 |
myoblast | 1.64e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.64e-10 | 58 |
vascular associated smooth muscle cell | 7.49e-10 | 32 |
meso-epithelial cell | 8.29e-10 | 45 |
lining cell | 1.15e-09 | 58 |
barrier cell | 1.15e-09 | 58 |
electrically responsive cell | 1.70e-08 | 61 |
electrically active cell | 1.70e-08 | 61 |
endothelial cell of vascular tree | 1.79e-08 | 24 |
blood vessel endothelial cell | 2.79e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.79e-08 | 18 |