FFCP PHASE1:Hg19::chr16:13533845..13533856,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:13533845..13533856,+ | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr16:13533845..13533856,+ | |description=CAGE_peak_at_chr16:13533845..13533856,+ | ||
|id=chr16:13533845..13533856,+ | |id=chr16:13533845..13533856,+ | ||
|ontology_enrichment_celltype=CL:0002274!2.89e-24!5;CL:0000457!2.89e-24!5;CL:0002191!2.89e-24!5;CL:0000097!2.89e-24!5;CL:0000831!2.89e-24!5;CL:0002028!2.89e-24!5;CL:0000946!3.15e-14!1;CL:0000786!3.15e-14!1;CL:0000980!3.15e-14!1;CL:0000163!8.77e-14!9;CL:0002322!1.58e-11!5;CL:0000945!3.78e-09!24;CL:0000826!3.78e-09!24;CL:0000785!9.19e-08!2;CL:0000955!9.19e-08!2;CL:0000818!9.19e-08!2;CL:0000954!9.19e-08!2;CL:0000816!9.19e-08!2 | |ontology_enrichment_celltype=CL:0002274!2.89e-24!5;CL:0000457!2.89e-24!5;CL:0002191!2.89e-24!5;CL:0000097!2.89e-24!5;CL:0000831!2.89e-24!5;CL:0002028!2.89e-24!5;CL:0000946!3.15e-14!1;CL:0000786!3.15e-14!1;CL:0000980!3.15e-14!1;CL:0000163!8.77e-14!9;CL:0002322!1.58e-11!5;CL:0000945!3.78e-09!24;CL:0000826!3.78e-09!24;CL:0000785!9.19e-08!2;CL:0000955!9.19e-08!2;CL:0000818!9.19e-08!2;CL:0000954!9.19e-08!2;CL:0000816!9.19e-08!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.66e-23;3!UBERON:0004872;8.16e-11;7!UBERON:0006238;2.55e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;5.73e-08;10!DOID:3093;8.14e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.73e-08,10;DOID:3093,8.38e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001905!5.74e-08!2;UBERON:0002757!5.74e-08!2;UBERON:0010134!5.74e-08!2;UBERON:0002784!5.74e-08!2;UBERON:0005408!5.74e-08!2;UBERON:0001899!5.74e-08!2 | |ontology_enrichment_uberon=UBERON:0001905!5.74e-08!2;UBERON:0002757!5.74e-08!2;UBERON:0010134!5.74e-08!2;UBERON:0002784!5.74e-08!2;UBERON:0005408!5.74e-08!2;UBERON:0001899!5.74e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.62e-23;3!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5!UBERON:0000966;1.71e-14;5!UBERON:0005388;1.71e-14;5!UBERON:0001802;1.71e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.62e-23,3;UBERON:0004854,2.62e-23,3;UBERON:0009034,2.62e-23,3;UBERON:0002095,2.62e-23,3;UBERON:0004782,2.62e-23,3;UBERON:0003281,2.62e-23,3;UBERON:0009664,2.62e-23,3;UBERON:0002296,2.62e-23,3;UBERON:0005602,2.62e-23,3;UBERON:0001179,2.62e-23,3;UBERON:0006293,2.62e-23,3;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0004457,7.48e-07,12;UBERON:0000042,7.48e-07,12;UBERON:0003887,7.48e-07,12 | |||
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|short_description=p@chr16:13533845..13533856,+ | |short_description=p@chr16:13533845..13533856,+ | ||
}} | }} |
Latest revision as of 06:23, 25 July 2015
Short description: | p@chr16:13533845..13533856, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:13533845..13533856, + |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 2.62e-23 | 3 |
gastrointestinal system mesentery | 2.62e-23 | 3 |
stomach region | 2.62e-23 | 3 |
mesentery | 2.62e-23 | 3 |
gastrointestinal system serosa | 2.62e-23 | 3 |
mesentery of stomach | 2.62e-23 | 3 |
gut mesentery | 2.62e-23 | 3 |
dorsal mesentery | 2.62e-23 | 3 |
dorsal mesogastrium | 2.62e-23 | 3 |
peritoneal cavity | 2.62e-23 | 3 |
spleen primordium | 2.62e-23 | 3 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
cavity lining | 7.48e-07 | 12 |
serous membrane | 7.48e-07 | 12 |
intraembryonic coelom | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.73e-08 | 10 |
nervous system cancer | 8.38e-07 | 11 |