FFCP PHASE1:Hg19::chr17:18012062..18012075,+: Difference between revisions
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|id=chr17:18012062..18012075,+
|short_description=p1@MYO15A
|description=CAGE_peak_1_at_MYO15A_5end
|association_with_transcript=42bp_to_ENST00000205890,NM_016239,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51168 | |EntrezGene=51168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7594 | |HGNC=7594 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKN7 | |UniProt=Q9UKN7 | ||
|association_with_transcript=42bp_to_ENST00000205890,NM_016239,uc010vxh.1_5end | |||
|cluster_id=chr17:18012062..18012075,+ | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_1_at_MYO15A_5end | |||
|id=chr17:18012062..18012075,+ | |||
|ontology_enrichment_celltype=CL:0000242!8.82e-51!2;CL:0000312!4.92e-21!5;CL:0000240!1.03e-17!6;CL:0000311!1.03e-17!6;CL:0000079!1.03e-17!6;CL:0000237!1.03e-17!6;CL:0000036!1.03e-17!6;CL:0000357!1.03e-17!6;CL:0000114!1.03e-17!6;CL:0000362!1.51e-13!8;CL:0002159!1.04e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.05e-79;2!CL:0000242;1.05e-79;2!CL:0000312;1.05e-32;5!CL:0000240;1.82e-27;6!CL:0000311;1.82e-27;6!CL:0000079;1.82e-27;6!CL:0000237;1.82e-27;6!CL:0000362;1.03e-18;9!CL:0002159;2.00e-12;14!CL:0000095;1.99e-09;17!CL:0002319;6.43e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.05e-79,2;CL:0000312,1.05e-32,5;CL:0000240,1.82e-27,6;CL:0000311,1.82e-27,6;CL:0000079,1.82e-27,6;CL:0000237,1.82e-27,6;CL:0000036,1.82e-27,6;CL:0000357,1.82e-27,6;CL:0000114,1.82e-27,6;CL:0000362,1.03e-18,9;CL:0002159,2.00e-12,14;CL:0000095,1.99e-09,17;CL:0000123,1.99e-09,17;CL:0002319,6.43e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000357;1.82e-27;6!CL:0000114;1.82e-27;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!2.42e-50!2;UBERON:0003296!8.66e-26!4;UBERON:0010133!8.66e-26!4;UBERON:0001894!3.29e-15!7;UBERON:0006222!3.29e-15!7;UBERON:0002148!1.37e-13!2;UBERON:0009662!1.37e-13!2;UBERON:0000988!1.67e-09!3;UBERON:0006331!1.67e-09!3;UBERON:0001003!3.76e-08!14;UBERON:0007376!3.76e-08!14;UBERON:0007383!3.76e-08!14;UBERON:0003343!2.04e-07!4;UBERON:0004785!2.04e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.22e-79;2!UBERON:0003296;3.31e-40;4!UBERON:0010133;3.31e-40;4!UBERON:0001894;1.61e-23;7!UBERON:0001003;1.15e-11;15!UBERON:0007376;1.15e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.22e-79,2;UBERON:0003296,3.31e-40,4;UBERON:0010133,3.31e-40,4;UBERON:0001894,1.61e-23,7;UBERON:0006222,1.61e-23,7;UBERON:0001003,1.15e-11,15;UBERON:0007376,1.15e-11,15;UBERON:0007383,1.15e-11,15 | |||
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|short_description=p1@MYO15A | |||
}} | }} |
Latest revision as of 22:34, 18 September 2015
Short description: | p1@MYO15A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYO15A_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | 42bp_to_ENST00000205890, NM_016239, uc010vxh.1_5end |
EntrezGene: | MYO15A |
HGNC: | 7594 |
UniProt: | Q9UKN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.05e-79 | 2 |
keratinocyte | 1.05e-32 | 5 |
stratified squamous epithelial cell | 1.82e-27 | 6 |
keratin accumulating cell | 1.82e-27 | 6 |
stratified epithelial cell | 1.82e-27 | 6 |
keratinizing barrier epithelial cell | 1.82e-27 | 6 |
epithelial fate stem cell | 1.82e-27 | 6 |
stratified epithelial stem cell | 1.82e-27 | 6 |
surface ectodermal cell | 1.82e-27 | 6 |
epidermal cell | 1.03e-18 | 9 |
general ecto-epithelial cell | 2.00e-12 | 14 |
neuron associated cell | 1.99e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.99e-09 | 17 |
neural cell | 6.43e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.22e-79 | 2 |
gland of diencephalon | 3.31e-40 | 4 |
neuroendocrine gland | 3.31e-40 | 4 |
diencephalon | 1.61e-23 | 7 |
future diencephalon | 1.61e-23 | 7 |
skin epidermis | 1.15e-11 | 15 |
outer epithelium | 1.15e-11 | 15 |
enveloping layer of ectoderm | 1.15e-11 | 15 |