FFCP PHASE1:Hg19::chr17:15942934..15942957,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:15942934..15942957,-
|short_description=p5@NCOR1
|description=CAGE_peak_5_at_NCOR1_5end
|association_with_transcript=-154bp_to_AB028451_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9611 | |EntrezGene=9611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7672 | |HGNC=7672 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPY1 | |UniProt=Q9UPY1 | ||
|association_with_transcript=-154bp_to_AB028451_5end | |||
|cluster_id=chr17:15942934..15942957,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_NCOR1_5end | |||
|id=chr17:15942934..15942957,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.53e-17;12!CL:0000346;1.46e-08;3!CL:1000428;1.46e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-17,12;CL:0000346,1.51e-08,3;CL:1000428,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.31e-09;11!UBERON:0009497;9.35e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;3.43e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.24e-12,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.21e-29;19!UBERON:0006925;3.21e-29;19!UBERON:0002423;2.72e-22;25!UBERON:0002365;5.45e-18;31!UBERON:0002330;5.45e-18;31!UBERON:0002368;1.44e-15;33!UBERON:0000949;2.46e-11;43!UBERON:0000412;1.46e-08;3!UBERON:0001992;1.46e-08;3!UBERON:0005172;3.17e-08;52!UBERON:0005173;3.17e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.21e-29,19;UBERON:0006925,3.21e-29,19;UBERON:0008836,3.21e-29,19;UBERON:0008835,2.76e-25,22;UBERON:0003894,2.76e-25,22;UBERON:0009854,3.35e-24,23;UBERON:0007499,2.72e-22,25;UBERON:0009497,2.72e-22,25;UBERON:0000015,2.72e-22,25;UBERON:0002423,2.72e-22,25;UBERON:0006235,2.72e-22,25;UBERON:0004161,2.72e-22,25;UBERON:0009856,1.91e-21,26;UBERON:0002365,4.92e-18,31;UBERON:0002330,4.92e-18,31;UBERON:0002368,5.28e-16,35;UBERON:0000949,1.70e-12,45;UBERON:0003929,1.92e-10,54;UBERON:0005172,1.92e-10,54;UBERON:0005173,1.92e-10,54;UBERON:0002530,1.43e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0000412,1.51e-08,3;UBERON:0001992,1.51e-08,3;UBERON:0005911,6.51e-07,82 | |||
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| ||
|short_description=p5@NCOR1 | |||
}} | }} |
Latest revision as of 19:16, 18 September 2015
Short description: | p5@NCOR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NCOR1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -154bp_to_AB028451_5end |
EntrezGene: | NCOR1 |
HGNC: | 7672 |
UniProt: | Q9UPY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.46e-17 | 12 |
hair follicle dermal papilla cell | 1.51e-08 | 3 |
stem cell of epidermis | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 3.21e-29 | 19 |
digestive gland | 3.21e-29 | 19 |
liver bud | 3.21e-29 | 19 |
hepatic diverticulum | 2.76e-25 | 22 |
liver primordium | 2.76e-25 | 22 |
digestive tract diverticulum | 3.35e-24 | 23 |
epithelial sac | 2.72e-22 | 25 |
epithelium of foregut-midgut junction | 2.72e-22 | 25 |
anatomical boundary | 2.72e-22 | 25 |
hepatobiliary system | 2.72e-22 | 25 |
foregut-midgut junction | 2.72e-22 | 25 |
septum transversum | 2.72e-22 | 25 |
sac | 1.91e-21 | 26 |
exocrine gland | 4.92e-18 | 31 |
exocrine system | 4.92e-18 | 31 |
endocrine gland | 5.28e-16 | 35 |
endocrine system | 1.70e-12 | 45 |
gut epithelium | 1.92e-10 | 54 |
abdomen element | 1.92e-10 | 54 |
abdominal segment element | 1.92e-10 | 54 |
gland | 1.43e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
dermal papilla | 1.51e-08 | 3 |
papillary layer of dermis | 1.51e-08 | 3 |
endo-epithelium | 6.51e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.24e-12 | 2 |