FFCP PHASE1:Hg19::chr15:33024456..33024470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26585 | |EntrezGene=26585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2001 | |HGNC=2001 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-276bp_to_AL359059_5end | |association_with_transcript=-276bp_to_AL359059_5end | ||
|cluster_id=chr15:33024456..33024470,+ | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_6_at_GREM1_5end | |description=CAGE_peak_6_at_GREM1_5end | ||
|id=chr15:33024456..33024470,+ | |id=chr15:33024456..33024470,+ | ||
|ontology_enrichment_celltype=CL:0000057!4.16e-26!75;CL:0000055!2.89e-25!180;CL:0002620!4.94e-15!23;CL:0000048!9.44e-15!430;CL:0000723!4.89e-14!436;CL:0000034!4.02e-13!444;CL:0002334!5.88e-12!12;CL:0002320!2.14e-09!365;CL:0000134!6.08e-09!358;CL:0002371!1.20e-08!591;CL:0000680!6.07e-08!57;CL:0000056!6.07e-08!57;CL:0000355!6.07e-08!57;CL:0000499!7.50e-08!27;CL:0000192!1.49e-07!42;CL:0000514!1.49e-07!42;CL:0000144!3.13e-07!625;CL:0000219!3.14e-07!390;CL:0000153!7.21e-07!9;CL:0000447!7.21e-07!9 | |ontology_enrichment_celltype=CL:0000057!4.16e-26!75;CL:0000055!2.89e-25!180;CL:0002620!4.94e-15!23;CL:0000048!9.44e-15!430;CL:0000723!4.89e-14!436;CL:0000034!4.02e-13!444;CL:0002334!5.88e-12!12;CL:0002320!2.14e-09!365;CL:0000134!6.08e-09!358;CL:0002371!1.20e-08!591;CL:0000680!6.07e-08!57;CL:0000056!6.07e-08!57;CL:0000355!6.07e-08!57;CL:0000499!7.50e-08!27;CL:0000192!1.49e-07!42;CL:0000514!1.49e-07!42;CL:0000144!3.13e-07!625;CL:0000219!3.14e-07!390;CL:0000153!7.21e-07!9;CL:0000447!7.21e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.85e-18;23!CL:0002334;6.02e-17;12!CL:0000057;4.67e-09;73!CL:0002320;2.29e-08;188!CL:0002579;6.06e-08;3!CL:0000499;6.58e-08;28!CL:0002580;8.58e-08;3!CL:0000135;9.59e-08;3!CL:0000388;9.59e-08;3!CL:0002615;1.26e-07;3!CL:0000346;7.66e-07;3!CL:1000428;7.66e-07;3!CL:0002559;8.10e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.74e-31,76;CL:0002620,4.73e-18,23;CL:0002334,4.62e-17,12;CL:0000048,5.02e-15,427;CL:0000723,1.56e-14,433;CL:0000034,6.71e-14,441;CL:0000134,5.35e-13,354;CL:0002320,2.10e-12,361;CL:0000219,6.73e-11,386;CL:0000136,3.16e-08,15;CL:0002579,6.29e-08,3;CL:0002580,7.70e-08,3;CL:0000499,9.32e-08,28;CL:0000135,1.05e-07,3;CL:0000388,1.05e-07,3;CL:0002615,1.34e-07,3;CL:0000346,6.64e-07,3;CL:1000428,6.64e-07,3;CL:0002559,6.97e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.10e-11!14;DOID:17!3.22e-07!5;DOID:450!3.22e-07!5;DOID:66!3.22e-07!5;DOID:423!3.22e-07!5;DOID:0080000!3.22e-07!5;DOID:11722!3.22e-07!5 | |ontology_enrichment_disease=DOID:2394!3.10e-11!14;DOID:17!3.22e-07!5;DOID:450!3.22e-07!5;DOID:66!3.22e-07!5;DOID:423!3.22e-07!5;DOID:0080000!3.22e-07!5;DOID:11722!3.22e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.04e-11;5!DOID:450;2.04e-11;5!DOID:66;2.04e-11;5!DOID:423;2.04e-11;5!DOID:0080000;2.04e-11;5!DOID:11722;2.04e-11;5!DOID:2394;3.45e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.90e-11,5;DOID:450,1.90e-11,5;DOID:66,1.90e-11,5;DOID:423,1.90e-11,5;DOID:0080000,1.90e-11,5;DOID:11722,1.90e-11,5;DOID:2394,2.53e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.11e-13!45;UBERON:0002416!1.11e-13!45;UBERON:0000914!9.82e-13!83;UBERON:0002329!9.82e-13!83;UBERON:0003077!9.82e-13!83;UBERON:0003059!9.82e-13!83;UBERON:0007282!9.82e-13!83;UBERON:0009618!9.82e-13!83;UBERON:0007285!9.82e-13!83;UBERON:0002097!1.30e-12!40;UBERON:0003102!7.32e-11!95;UBERON:0004290!1.90e-10!70;UBERON:0005256!1.11e-09!143;UBERON:0000486!1.67e-09!82;UBERON:0002384!2.39e-09!375;UBERON:0003688!1.33e-08!6;UBERON:0002358!1.33e-08!6;UBERON:0003684!1.33e-08!6;UBERON:0001178!1.33e-08!6;UBERON:0000475!3.90e-08!365;UBERON:0004457!1.89e-07!12;UBERON:0000042!1.89e-07!12;UBERON:0002100!2.04e-07!216;UBERON:0002385!5.22e-07!63;UBERON:0001015!5.22e-07!63;UBERON:0000383!5.22e-07!63;UBERON:0001134!6.23e-07!61;UBERON:0002036!6.23e-07!61;UBERON:0003082!6.23e-07!61 | |ontology_enrichment_uberon=UBERON:0002199!1.11e-13!45;UBERON:0002416!1.11e-13!45;UBERON:0000914!9.82e-13!83;UBERON:0002329!9.82e-13!83;UBERON:0003077!9.82e-13!83;UBERON:0003059!9.82e-13!83;UBERON:0007282!9.82e-13!83;UBERON:0009618!9.82e-13!83;UBERON:0007285!9.82e-13!83;UBERON:0002097!1.30e-12!40;UBERON:0003102!7.32e-11!95;UBERON:0004290!1.90e-10!70;UBERON:0005256!1.11e-09!143;UBERON:0000486!1.67e-09!82;UBERON:0002384!2.39e-09!375;UBERON:0003688!1.33e-08!6;UBERON:0002358!1.33e-08!6;UBERON:0003684!1.33e-08!6;UBERON:0001178!1.33e-08!6;UBERON:0000475!3.90e-08!365;UBERON:0004457!1.89e-07!12;UBERON:0000042!1.89e-07!12;UBERON:0002100!2.04e-07!216;UBERON:0002385!5.22e-07!63;UBERON:0001015!5.22e-07!63;UBERON:0000383!5.22e-07!63;UBERON:0001134!6.23e-07!61;UBERON:0002036!6.23e-07!61;UBERON:0003082!6.23e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.94e-15;9!UBERON:0000042;8.94e-15;9!UBERON:0003688;6.75e-14;6!UBERON:0002358;6.75e-14;6!UBERON:0003684;6.75e-14;6!UBERON:0001178;6.75e-14;6!UBERON:0002097;8.44e-13;41!UBERON:0002199;6.06e-11;46!UBERON:0002416;6.06e-11;46!UBERON:0003102;5.20e-09;50!UBERON:0002384;1.37e-08;198!UBERON:0007846;9.59e-08;3!UBERON:0000043;9.59e-08;3!UBERON:0007845;9.59e-08;3!UBERON:0001135;1.27e-07;15!UBERON:0002118;3.37e-07;5!UBERON:0000412;7.66e-07;3!UBERON:0001992;7.66e-07;3!UBERON:0002073;8.10e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,5.20e-17,46;UBERON:0002416,5.20e-17,46;UBERON:0002097,4.49e-16,41;UBERON:0003688,7.41e-14,6;UBERON:0002358,7.41e-14,6;UBERON:0003684,7.41e-14,6;UBERON:0001178,7.41e-14,6;UBERON:0002384,6.44e-13,371;UBERON:0003102,3.44e-11,99;UBERON:0004457,1.45e-10,12;UBERON:0000042,1.45e-10,12;UBERON:0007846,1.05e-07,3;UBERON:0000043,1.05e-07,3;UBERON:0007845,1.05e-07,3;UBERON:0001135,1.26e-07,15;UBERON:0002118,2.70e-07,5;UBERON:0004458,2.74e-07,49;UBERON:0000412,6.64e-07,3;UBERON:0001992,6.64e-07,3;UBERON:0002073,6.97e-07,5;UBERON:0005086,6.97e-07,5 | |||
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| ||
|short_description=p6@GREM1 | |short_description=p6@GREM1 | ||
}} | }} |
Latest revision as of 04:51, 17 September 2015
Short description: | p6@GREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GREM1_5end |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | -276bp_to_AL359059_5end |
EntrezGene: | GREM1 |
HGNC: | 2001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.74e-31 | 76 |
skin fibroblast | 4.73e-18 | 23 |
preadipocyte | 4.62e-17 | 12 |
multi fate stem cell | 5.02e-15 | 427 |
somatic stem cell | 1.56e-14 | 433 |
stem cell | 6.71e-14 | 441 |
mesenchymal cell | 5.35e-13 | 354 |
connective tissue cell | 2.10e-12 | 361 |
motile cell | 6.73e-11 | 386 |
fat cell | 3.16e-08 | 15 |
omentum preadipocyte | 6.29e-08 | 3 |
preadipocyte of the breast | 7.70e-08 | 3 |
stromal cell | 9.32e-08 | 28 |
fibrocyte | 1.05e-07 | 3 |
tendon cell | 1.05e-07 | 3 |
adipocyte of omentum tissue | 1.34e-07 | 3 |
hair follicle dermal papilla cell | 6.64e-07 | 3 |
stem cell of epidermis | 6.64e-07 | 3 |
hair follicle cell | 6.97e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
integument | 5.20e-17 | 46 |
integumental system | 5.20e-17 | 46 |
skin of body | 4.49e-16 | 41 |
omentum | 7.41e-14 | 6 |
peritoneum | 7.41e-14 | 6 |
abdominal cavity | 7.41e-14 | 6 |
visceral peritoneum | 7.41e-14 | 6 |
connective tissue | 6.44e-13 | 371 |
surface structure | 3.44e-11 | 99 |
cavity lining | 1.45e-10 | 12 |
serous membrane | 1.45e-10 | 12 |
dense regular connective tissue | 1.05e-07 | 3 |
tendon | 1.05e-07 | 3 |
regular connective tissue | 1.05e-07 | 3 |
smooth muscle tissue | 1.26e-07 | 15 |
right ovary | 2.70e-07 | 5 |
body cavity or lining | 2.74e-07 | 49 |
dermal papilla | 6.64e-07 | 3 |
papillary layer of dermis | 6.64e-07 | 3 |
hair follicle | 6.97e-07 | 5 |
hair follicle placode | 6.97e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.90e-11 | 5 |
myotonic disease | 1.90e-11 | 5 |
muscle tissue disease | 1.90e-11 | 5 |
myopathy | 1.90e-11 | 5 |
muscular disease | 1.90e-11 | 5 |
myotonic dystrophy | 1.90e-11 | 5 |
ovarian cancer | 2.53e-08 | 14 |