FFCP PHASE1:Hg19::chr14:23623503..23623514,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23428 | |EntrezGene=23428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11066 | |HGNC=11066 | ||
|TSSclassifier=strong | |||
|UniProt=B4DTV6,E9PS92 | |UniProt=B4DTV6,E9PS92 | ||
|association_with_transcript=87bp_to_ENST00000422941,ENST00000528860_5end | |association_with_transcript=87bp_to_ENST00000422941,ENST00000528860_5end | ||
|cluster_id=chr14:23623503..23623514,- | |||
|coexpression_cluster_id=C3415 | |||
|description=CAGE_peak_6_at_SLC7A8_5end | |description=CAGE_peak_6_at_SLC7A8_5end | ||
|id=chr14:23623503..23623514,- | |id=chr14:23623503..23623514,- | ||
|ontology_enrichment_celltype=CL:0000136!2.98e-08!15 | |ontology_enrichment_celltype=CL:0000136!2.98e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.81e-13;13!CL:0000575;2.97e-08;2!CL:0002617;4.41e-08;2!CL:0002536;1.06e-07;2!CL:0002363;1.06e-07;2!CL:0000622;8.05e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.15e-11,15;CL:0000575,1.73e-08,2;CL:0002617,5.48e-08,2;CL:0002363,1.66e-07,2;CL:0000008,1.66e-07,2;CL:0002536,2.49e-07,2;CL:0002559,8.25e-07,5;CL:0000622,8.59e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000008;1.06e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.30e-13!95;UBERON:0001004!2.00e-08!72;UBERON:0004119!2.40e-07!169;UBERON:0000925!2.40e-07!169;UBERON:0006595!2.40e-07!169;UBERON:0001444!2.47e-07!48;UBERON:0004923!4.97e-07!57;UBERON:0000165!9.96e-07!28;UBERON:0000930!9.96e-07!28 | |ontology_enrichment_uberon=UBERON:0003102!2.30e-13!95;UBERON:0001004!2.00e-08!72;UBERON:0004119!2.40e-07!169;UBERON:0000925!2.40e-07!169;UBERON:0006595!2.40e-07!169;UBERON:0001444!2.47e-07!48;UBERON:0004923!4.97e-07!57;UBERON:0000165!9.96e-07!28;UBERON:0000930!9.96e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0000964;2.90e-14;4!UBERON:0010409;2.90e-14;4!UBERON:0003566;1.06e-07;2!UBERON:0001777;1.06e-07;2!UBERON:0003102;3.48e-07;50!UBERON:0000033;8.64e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000964,2.73e-14,4;UBERON:0010409,2.73e-14,4;UBERON:0004348,2.73e-14,4;UBERON:0005427,2.73e-14,4;UBERON:0005085,2.74e-13,31;UBERON:0001444,6.06e-09,49;UBERON:0003102,3.89e-08,99;UBERON:0003566,1.66e-07,2;UBERON:0001777,1.66e-07,2;UBERON:0000033,1.72e-07,56;UBERON:0004923,4.98e-07,66;UBERON:0002073,8.25e-07,5;UBERON:0005086,8.25e-07,5 | |||
|phase1_expression=1.2717486548939,2.14100523890983,2.11431606143957,0,0.893922188854576,0.872338524100369,2.53299878168311,0,2.61185628199839,0.245733936501509,0.697801167972428,1.09220686065086,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,0,0,1.44076983047484,3.27865759463288,1.85392221392215,0.324547393654683,0.522389211897802,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0.622422070799533,0,0,0,0,0.70296429550139,0,0,0.298897361103602,0.23486899728753,0,0.140450806702248,0.816616685019573,0,1.96318984233954,2.37600571456411,0,0,0,0.336672227908132,0,0.277064115484183,0,0,0.45071417671979,0,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0.412210116953756,0,0.18611685633159,0.506328996723799,0.584622030967192,0,0.368199594569197,0.969876340912871,0,0.201504196455281,0.67824236924195,0,0,1.14721838155602,0,0,0,0,0,0,0,1.92972281457866,1.38134921352481,0.464367928031979,1.44375896333917,0.236613600079688,0.337169380156203,0,0.441175890929576,0.653638332277218,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0,0.658501712451753,1.1240175325762,0.603173834469785,1.01847289674383,1.3032332212413,1.03993478527958,0,0,0,0,0,0,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.283550194484773,1.43293636324557,0.290633938513962,0.383382679165211,0.985326475791887,0,0.207328115540772,0,0,0.952468414382536,1.52795370223311,0,0,0,0,0.571652865261156,0,0,0,0,14.3062578340753,0,0,0,0,0,0,0.142977993658148,0.542621605391443,2.46972101034231,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0.157702415033935,0.35142424497814,0.601892199455438,0,1.03473071292505,0,0,0.781952530212746,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0.992431231275107,0.153461973288062,0.280660094433074,0.512556597022804,0,0,0,0.462629081407967,0,0.492762936082855,0,0.116210378459959,0.120859449591622,0,0.644566922551274,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,1.72279661398852,0,0,0,0,0,0,0.322260734604821,0.290033387828457,0,0,0.991709492165869,0.192190067365106,0.382838137483752,0.50578890427775,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.511795582622668,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,1.73632660280006,0.655894752046633,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,0.329294892959902,1.13841952129715,0.349934720244983,0.48111056362756,1.34060455107157,0,0.376575203107117,0,0,2.21715076768338,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,3.22317994398167,0,0,0.568272293612826,0,0.593929361665277,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,1.13697999995054,0.724999575434793,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0.653630781113941,8.22600091243759,0.846452843541768,0,0,0.269272933229316,0,1.27600463892768,0,2.13213910407454,0,0.31396051279005,0.166211681900156,0,0.19606253431774,0.167821586975843,0.37950746544837,0,0,0,0,1.29833183845255,0,0.796118080530053,0,0,0,0,0.269604531922708,0,0,0,0.19566461893209,0,2.36750641709634,3.62972148145992,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0.587954384486266,0,0.34945333648406,0,0,0,0,2.13375836274523,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0.77380195455795,0,5.03152031398899,0.630445658393585,0.314727528809989,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0,0,0,0.640724475406168,0,0,0,0,0,1.27668251554036,0,0.5013797880454,2.45076461410769,2.95085367638824,0.157054096250234,0,0,0,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0,0.889811221596536,0,0.453692771289717,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,2.57329909649911,0,0,0,0,0.179088841081487,0.308801447160972,0.438568099157414,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0.733714394086716,0.115525666150338,0,0,2.98374333174412,1.20336525358812,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0.336283722218824,0,0,1.68534503309014,0,0,0.0679697329768317,0,0,0,0.863424021355654,0,0,0,0,0,1.1436247068265,0,0,0,0,0.62164849248911,1.19502933965765,2.07377898544228,0.430227358820278,0.118332000730565,0.0852134047591577,2.11693525095465,0,0,0,0,0.490751168076215,0.243835849964539,0.647428837187895,0.410651227424988,0,0,0,0.198950775161368,0,0.33883824611688,0,0,0.463044948647668,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,1.46067277649303,0,0,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,1.73050624849516,0,0,0,0,0,0.0918948995348449,0,3.03114792872958,2.67964130156179,0,0,0.852935927603924,0,0,0.124149428591716,0,0.572824424503484,0,0.870866991587845,0.342233301085281,1.75115337837928,0.717222053926764,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=1.2717486548939,2.14100523890983,2.11431606143957,0,0.893922188854576,0.872338524100369,2.53299878168311,0,2.61185628199839,0.245733936501509,0.697801167972428,1.09220686065086,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,0,0,1.44076983047484,3.27865759463288,1.85392221392215,0.324547393654683,0.522389211897802,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0.622422070799533,0,0,0,0,0.70296429550139,0,0,0.298897361103602,0.23486899728753,0,0.140450806702248,0.816616685019573,0,1.96318984233954,2.37600571456411,0,0,0,0.336672227908132,0,0.277064115484183,0,0,0.45071417671979,0,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0.412210116953756,0,0.18611685633159,0.506328996723799,0.584622030967192,0,0.368199594569197,0.969876340912871,0,0.201504196455281,0.67824236924195,0,0,1.14721838155602,0,0,0,0,0,0,0,1.92972281457866,1.38134921352481,0.464367928031979,1.44375896333917,0.236613600079688,0.337169380156203,0,0.441175890929576,0.653638332277218,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0,0.658501712451753,1.1240175325762,0.603173834469785,1.01847289674383,1.3032332212413,1.03993478527958,0,0,0,0,0,0,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.283550194484773,1.43293636324557,0.290633938513962,0.383382679165211,0.985326475791887,0,0.207328115540772,0,0,0.952468414382536,1.52795370223311,0,0,0,0,0.571652865261156,0,0,0,0,14.3062578340753,0,0,0,0,0,0,0.142977993658148,0.542621605391443,2.46972101034231,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0.157702415033935,0.35142424497814,0.601892199455438,0,1.03473071292505,0,0,0.781952530212746,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0.992431231275107,0.153461973288062,0.280660094433074,0.512556597022804,0,0,0,0.462629081407967,0,0.492762936082855,0,0.116210378459959,0.120859449591622,0,0.644566922551274,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,1.72279661398852,0,0,0,0,0,0,0.322260734604821,0.290033387828457,0,0,0.991709492165869,0.192190067365106,0.382838137483752,0.50578890427775,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.511795582622668,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,1.73632660280006,0.655894752046633,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,0.329294892959902,1.13841952129715,0.349934720244983,0.48111056362756,1.34060455107157,0,0.376575203107117,0,0,2.21715076768338,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,3.22317994398167,0,0,0.568272293612826,0,0.593929361665277,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,1.13697999995054,0.724999575434793,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0.653630781113941,8.22600091243759,0.846452843541768,0,0,0.269272933229316,0,1.27600463892768,0,2.13213910407454,0,0.31396051279005,0.166211681900156,0,0.19606253431774,0.167821586975843,0.37950746544837,0,0,0,0,1.29833183845255,0,0.796118080530053,0,0,0,0,0.269604531922708,0,0,0,0.19566461893209,0,2.36750641709634,3.62972148145992,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0.587954384486266,0,0.34945333648406,0,0,0,0,2.13375836274523,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0.77380195455795,0,5.03152031398899,0.630445658393585,0.314727528809989,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0,0,0,0.640724475406168,0,0,0,0,0,1.27668251554036,0,0.5013797880454,2.45076461410769,2.95085367638824,0.157054096250234,0,0,0,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0,0.889811221596536,0,0.453692771289717,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,2.57329909649911,0,0,0,0,0.179088841081487,0.308801447160972,0.438568099157414,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0.733714394086716,0.115525666150338,0,0,2.98374333174412,1.20336525358812,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0.336283722218824,0,0,1.68534503309014,0,0,0.0679697329768317,0,0,0,0.863424021355654,0,0,0,0,0,1.1436247068265,0,0,0,0,0.62164849248911,1.19502933965765,2.07377898544228,0.430227358820278,0.118332000730565,0.0852134047591577,2.11693525095465,0,0,0,0,0.490751168076215,0.243835849964539,0.647428837187895,0.410651227424988,0,0,0,0.198950775161368,0,0.33883824611688,0,0,0.463044948647668,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,1.46067277649303,0,0,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,1.73050624849516,0,0,0,0,0,0.0918948995348449,0,3.03114792872958,2.67964130156179,0,0,0.852935927603924,0,0,0.124149428591716,0,0.572824424503484,0,0.870866991587845,0.342233301085281,1.75115337837928,0.717222053926764,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p6@SLC7A8 | |short_description=p6@SLC7A8 | ||
}} | }} |
Latest revision as of 09:05, 19 September 2015
Short description: | p6@SLC7A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC7A8_5end |
Coexpression cluster: | C3415_Mesenchymal_colon_osteosarcoma_Corneal_seminal_retina_ductus |
Association with transcript: | 87bp_to_ENST00000422941, ENST00000528860_5end |
EntrezGene: | SLC7A8 |
HGNC: | 11066 |
UniProt: | B4DTV6E9PS92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.15e-11 | 15 |
corneal epithelial cell | 1.73e-08 | 2 |
adipocyte of breast | 5.48e-08 | 2 |
keratocyte | 1.66e-07 | 2 |
migratory cranial neural crest cell | 1.66e-07 | 2 |
amniotic epithelial cell | 2.49e-07 | 2 |
hair follicle cell | 8.25e-07 | 5 |
acinar cell | 8.59e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cornea | 2.73e-14 | 4 |
eye surface | 2.73e-14 | 4 |
optic eminence | 2.73e-14 | 4 |
corneal primordium | 2.73e-14 | 4 |
ectodermal placode | 2.74e-13 | 31 |
subdivision of head | 6.06e-09 | 49 |
surface structure | 3.89e-08 | 99 |
head connective tissue | 1.66e-07 | 2 |
substantia propria of cornea | 1.66e-07 | 2 |
head | 1.72e-07 | 56 |
organ component layer | 4.98e-07 | 66 |
hair follicle | 8.25e-07 | 5 |
hair follicle placode | 8.25e-07 | 5 |