FFCP PHASE1:Hg19::chr9:120466568..120466595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7099 | |EntrezGene=7099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11850 | |HGNC=11850 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000394487_5end | |association_with_transcript=-14bp_to_ENST00000394487_5end | ||
|cluster_id=chr9:120466568..120466595,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_TLR4_5end | |description=CAGE_peak_2_at_TLR4_5end | ||
|id=chr9:120466568..120466595,+ | |id=chr9:120466568..120466595,+ | ||
|ontology_enrichment_celltype=CL:0000766!4.80e-25!76;CL:0002057!4.68e-22!42;CL:0000860!2.15e-20!45;CL:0002194!6.94e-20!63;CL:0000576!6.94e-20!63;CL:0000040!6.94e-20!63;CL:0000559!6.94e-20!63;CL:0000839!7.11e-20!70;CL:0000557!2.86e-19!71;CL:0002009!1.79e-18!65;CL:0000763!3.77e-15!112;CL:0000049!3.77e-15!112;CL:0002139!1.35e-08!24;CL:0000048!5.60e-08!430;CL:0000115!9.56e-08!35;CL:0000723!7.78e-07!436;CL:0000071!8.35e-07!18;CL:0002546!8.35e-07!18 | |ontology_enrichment_celltype=CL:0000766!4.80e-25!76;CL:0002057!4.68e-22!42;CL:0000860!2.15e-20!45;CL:0002194!6.94e-20!63;CL:0000576!6.94e-20!63;CL:0000040!6.94e-20!63;CL:0000559!6.94e-20!63;CL:0000839!7.11e-20!70;CL:0000557!2.86e-19!71;CL:0002009!1.79e-18!65;CL:0000763!3.77e-15!112;CL:0000049!3.77e-15!112;CL:0002139!1.35e-08!24;CL:0000048!5.60e-08!430;CL:0000115!9.56e-08!35;CL:0000723!7.78e-07!436;CL:0000071!8.35e-07!18;CL:0002546!8.35e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-21;33!CL:0002057;1.02e-21;33!CL:0000473;1.30e-19;39!CL:0000234;1.30e-19;39!CL:0000576;1.66e-15;48!CL:0000766;1.33e-13;69!CL:0002139;1.66e-09;24!CL:0000115;9.21e-08;36!CL:0000763;1.54e-07;100!CL:0000071;2.16e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.97e-28,72;CL:0000473,1.03e-25,48;CL:0000234,1.03e-25,48;CL:0000860,6.91e-24,42;CL:0002057,6.91e-24,42;CL:0002194,3.61e-22,59;CL:0000576,3.61e-22,59;CL:0000040,3.61e-22,59;CL:0000559,3.61e-22,59;CL:0000839,6.77e-22,66;CL:0000557,2.01e-21,67;CL:0002009,1.43e-20,61;CL:0000763,7.26e-18,108;CL:0000049,7.26e-18,108;CL:0002139,2.00e-09,24;CL:0000115,1.28e-08,36;CL:0000071,2.00e-07,18;CL:0002546,2.00e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-17;42!CL:0002546;2.16e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!7.55e-29!216;UBERON:0002193!1.48e-22!112;UBERON:0001009!2.57e-21!113;UBERON:0004535!9.07e-21!110;UBERON:0002390!1.37e-20!102;UBERON:0003061!1.37e-20!102;UBERON:0002371!6.80e-19!80;UBERON:0001474!2.47e-16!86;UBERON:0002405!5.74e-16!115;UBERON:0002049!4.81e-14!79;UBERON:0007798!4.81e-14!79;UBERON:0002204!5.70e-13!167;UBERON:0004872!2.41e-12!84;UBERON:0004765!2.85e-12!101;UBERON:0001434!2.85e-12!101;UBERON:0000055!2.16e-11!69;UBERON:0001981!1.79e-10!60;UBERON:0007500!1.79e-10!60;UBERON:0004537!1.79e-10!60;UBERON:0006965!1.79e-10!60;UBERON:0000926!4.30e-10!448;UBERON:0004120!4.30e-10!448;UBERON:0006603!4.30e-10!448;UBERON:0000467!1.34e-09!625;UBERON:0000480!2.25e-09!626;UBERON:0000468!1.02e-08!659;UBERON:0000479!1.28e-07!787;UBERON:0001637!2.05e-07!42;UBERON:0003509!2.05e-07!42;UBERON:0004572!2.05e-07!42;UBERON:0007023!2.59e-07!115;UBERON:0007100!2.88e-07!27;UBERON:0004573!3.29e-07!33;UBERON:0004571!3.29e-07!33;UBERON:0003914!5.09e-07!118;UBERON:0000948!7.93e-07!24;UBERON:0005498!7.93e-07!24;UBERON:0004140!7.93e-07!24;UBERON:0009881!7.93e-07!24;UBERON:0004141!7.93e-07!24;UBERON:0003084!7.93e-07!24;UBERON:0007005!7.93e-07!24;UBERON:0004139!7.93e-07!24;UBERON:0004291!7.93e-07!24;UBERON:0001986!8.35e-07!18;UBERON:0004638!8.35e-07!18;UBERON:0004852!8.35e-07!18 | |ontology_enrichment_uberon=UBERON:0003081!7.55e-29!216;UBERON:0002193!1.48e-22!112;UBERON:0001009!2.57e-21!113;UBERON:0004535!9.07e-21!110;UBERON:0002390!1.37e-20!102;UBERON:0003061!1.37e-20!102;UBERON:0002371!6.80e-19!80;UBERON:0001474!2.47e-16!86;UBERON:0002405!5.74e-16!115;UBERON:0002049!4.81e-14!79;UBERON:0007798!4.81e-14!79;UBERON:0002204!5.70e-13!167;UBERON:0004872!2.41e-12!84;UBERON:0004765!2.85e-12!101;UBERON:0001434!2.85e-12!101;UBERON:0000055!2.16e-11!69;UBERON:0001981!1.79e-10!60;UBERON:0007500!1.79e-10!60;UBERON:0004537!1.79e-10!60;UBERON:0006965!1.79e-10!60;UBERON:0000926!4.30e-10!448;UBERON:0004120!4.30e-10!448;UBERON:0006603!4.30e-10!448;UBERON:0000467!1.34e-09!625;UBERON:0000480!2.25e-09!626;UBERON:0000468!1.02e-08!659;UBERON:0000479!1.28e-07!787;UBERON:0001637!2.05e-07!42;UBERON:0003509!2.05e-07!42;UBERON:0004572!2.05e-07!42;UBERON:0007023!2.59e-07!115;UBERON:0007100!2.88e-07!27;UBERON:0004573!3.29e-07!33;UBERON:0004571!3.29e-07!33;UBERON:0003914!5.09e-07!118;UBERON:0000948!7.93e-07!24;UBERON:0005498!7.93e-07!24;UBERON:0004140!7.93e-07!24;UBERON:0009881!7.93e-07!24;UBERON:0004141!7.93e-07!24;UBERON:0003084!7.93e-07!24;UBERON:0007005!7.93e-07!24;UBERON:0004139!7.93e-07!24;UBERON:0004291!7.93e-07!24;UBERON:0001986!8.35e-07!18;UBERON:0004638!8.35e-07!18;UBERON:0004852!8.35e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.43e-07;25!UBERON:0004638;2.16e-07;18!UBERON:0001986;2.16e-07;18!UBERON:0004852;2.16e-07;18!UBERON:0000948;3.33e-07;22!UBERON:0004535;3.87e-07;109 | |||
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|phase1_expression=20.5296568575729,18.6267455785155,23.5393854840272,20.0146596706261,12.5149106439641,35.7658794881151,0,0.631719873426831,0.522371256399677,0,0,0.873765488520689,0.263766978228454,1.48519623552056,1.65698687863958,5.3786011716142,0.602694528023977,0.730310090387373,1.95173119516203,1.23121058076788,1.42800483870977,0.313454721478088,0.572471974262113,1.23186982565596,2.76193807108566,0.152826811495903,0.164201178899891,0.157421562627358,16.521299627654,8.06041736004147,5.41856431606266,0.919421224478927,0,0,0,0,1.46800219667424,9.41792194504192,20.6560780894246,11.0675544065084,5.15005590751826,4.53451132426571,5.40908692031792,20.5011516679186,22.2946806776398,26.9268307918476,38.5832201263436,17.6802191849385,38.0938836200977,50.3461686563763,36.3748203271323,52.7355372651545,51.0223607490195,38.7290810150296,36.5651513804723,25.0362311591664,15.2827444032394,27.1915416178552,53.2585972725371,36.2649800595986,58.8190155735118,42.8806690242731,34.108285453299,45.6060483069983,102.734070474519,93.0511768493469,163.802251485836,44.7222624157003,35.9823213709939,49.0846789033564,88.9937268871052,95.3839077207792,114.242921866159,4.22510572623884,3.4016687994407,2.30624510059213,8.53697596713363,11.563620748796,12.2151445889781,0.855038231223746,2.98375015798635,2.19196984517561,0,0.546138611262131,0.889509253863555,2.13365111283254,0.400395987036012,0,1.98313461835459,0.954053754535364,0,0.587237189370939,0.382273228125229,2.64342657158052,5.04457706683382,1.31692042387539,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0.95569624297229,0,0,1.35517607169996,0.127986611154418,3.74792179657038,1.4206635122641,0,0,0,0,2.43806866313962,13.4140171940727,2.9408389224012,0.361439152384566,1.00267582127178,0.434539556882471,0.795285947051099,0.486634870302636,3.49778823507051,4.65631734671384,5.00658278450818,2.75056058545197,0,0,1.9472843619281,1.56716763569341,0.26591592103773,0.238490624305342,0.571994910780128,0,5.56534740626774,9.46258054616737,5.9013885273291,10.1755429546322,7.1314904155684,14.8563742647636,3.76190939766259,13.4376714768051,16.009481820902,9.0374565446461,4.02829317109147,7.60272105718513,4.14905497831888,9.55924008899259,9.72170337458112,6.42958043645374,5.83776368828041,7.88280363383256,4.5994991239765,8.54339093611316,2.74802615895611,176.585759364325,345.12443509201,0,8.94549513051573,23.3000141462827,3.31022952033047,15.4891775204359,9.22137793715728,1.68203280042692,0,4.68668341992604,4.66816553099649,7.67850830797222,10.4615617992614,7.11379909931178,8.64263886719998,0.70296429550139,1.87296046098192,3.99330275081114,1.19558944441441,0,0.161872944368132,0,1.42907919878425,0.122834317311768,0.929932030581889,0,0,0.910161361938026,1.43723628363248,0,0.250237039743928,1.10825646193673,0,1.5324389789951,0,9.52830338544177,1.97328599257748,0.213557388818567,2.33125091275518,1.80054657650641,0.618315175430633,3.09168648054755,1.30281799432113,0.337552664482532,0.292311015483596,0.252433774244115,0.552299391853796,3.39456719319505,0.355009592516614,0,1.18692414617341,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0.643240938192885,1.38134921352481,5.57241513638375,4.33127689001751,0.354920400119532,0.505754070234305,0.482022059766964,1.43382164552112,1.08939722046203,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,6.64339909162183,4.20725321410337,0.4115740113314,1.47008711385542,0,2.94848165003288,2.95394953340702,0,0,5.49016992955282,0,0,0,0,0.325808305310325,0,10.1031939417691,1.15930404975077,11.1538259524031,3.17606185074362,3.24089858803628,6.27838702374174,0,0,4.92434012174795,3.27605971194933,4.7561971932393,0,0.335964256397719,0,3.49278238541108,1.45316969256981,2.68367875415648,7.8826118063351,14.8801853482352,1.24396869324463,3.31475892859011,1.64115163454294,0.126995788584338,0,1.17217447210047,0,0.822619941626588,3.60411669412701,1.71495859578347,8.74622457893814,25.7216440611635,23.3215748910621,0.904902010304444,0,0,7.97814349754611,5.2003718455683,1.02882949704857,4.25547396069835,1.5985330740966,0.714889968290738,0,0,0.65147236858747,0.355391948742546,0,7.83742380354924,12.2014684204041,1.69954085009497,10.9461402577071,9.5428847372104,6.32501818449095,17.0133647399024,2.29723871668228,1.42636905040718,13.3198802134173,7.60262393436419,5.37182889719687,0,0.788123040807709,0.215627574859517,0.128343036279748,3.55732473911449,0,1.54657762555539,0.167516265334349,0,279.379619932299,206.421406850777,437.622782188453,1.10422342547226,7.50255781589516,3.7977103317963,10.1905722150095,8.20773348466944,6.46579901639132,11.9484243292567,0.300946099727719,0,0,1.99267679560631,1.84369168541703,0.173767228936166,0.587403472388222,1.71571711905428,3.3082884179662,5.1771408196468,5.33637789017222,0,0,0,12.9016060065764,7.67309866440312,3.92924132206303,13.4546106718486,8.18731598506726,10.2946509531909,7.42090332224955,3.54682295746108,2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| ||
|short_description=p2@TLR4 | |short_description=p2@TLR4 | ||
}} | }} |
Latest revision as of 18:49, 24 September 2015
Short description: | p2@TLR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TLR4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -14bp_to_ENST00000394487_5end |
EntrezGene: | TLR4 |
HGNC: | 11850 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.97e-28 | 72 |
defensive cell | 1.03e-25 | 48 |
phagocyte | 1.03e-25 | 48 |
classical monocyte | 6.91e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.91e-24 | 42 |
monopoietic cell | 3.61e-22 | 59 |
monocyte | 3.61e-22 | 59 |
monoblast | 3.61e-22 | 59 |
promonocyte | 3.61e-22 | 59 |
myeloid lineage restricted progenitor cell | 6.77e-22 | 66 |
granulocyte monocyte progenitor cell | 2.01e-21 | 67 |
macrophage dendritic cell progenitor | 1.43e-20 | 61 |
myeloid cell | 7.26e-18 | 108 |
common myeloid progenitor | 7.26e-18 | 108 |
endothelial cell of vascular tree | 2.00e-09 | 24 |
endothelial cell | 1.28e-08 | 36 |
blood vessel endothelial cell | 2.00e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.00e-07 | 18 |