FFCP PHASE1:Hg19::chr9:118358945..118358954,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:118358945..118358954,+ | |||
|coexpression_cluster_id=C4793 | |||
|description=CAGE_peak_at_chr9:118358945..118358954,+ | |description=CAGE_peak_at_chr9:118358945..118358954,+ | ||
|id=chr9:118358945..118358954,+ | |id=chr9:118358945..118358954,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.47e-31!180;CL:0000057!1.57e-26!75;CL:0002620!1.54e-22!23;CL:0000680!2.94e-13!57;CL:0000056!2.94e-13!57;CL:0000355!2.94e-13!57;CL:0000187!3.53e-12!54;CL:0000183!1.84e-10!59;CL:0000393!3.72e-10!60;CL:0000211!3.72e-10!60;CL:0000048!2.22e-09!430;CL:0000723!6.80e-09!436;CL:0000144!8.55e-09!625;CL:0002371!9.94e-09!591;CL:0000188!1.59e-08!9;CL:0000034!2.84e-08!444;CL:0000192!4.94e-08!42;CL:0000514!4.94e-08!42;CL:0000359!1.03e-07!32;CL:0000548!5.50e-07!679;CL:0000004!5.50e-07!679;CL:0000255!5.50e-07!679;CL:0000012!8.47e-07!682;CL:0002551!8.69e-07!6 | |ontology_enrichment_celltype=CL:0000055!3.47e-31!180;CL:0000057!1.57e-26!75;CL:0002620!1.54e-22!23;CL:0000680!2.94e-13!57;CL:0000056!2.94e-13!57;CL:0000355!2.94e-13!57;CL:0000187!3.53e-12!54;CL:0000183!1.84e-10!59;CL:0000393!3.72e-10!60;CL:0000211!3.72e-10!60;CL:0000048!2.22e-09!430;CL:0000723!6.80e-09!436;CL:0000144!8.55e-09!625;CL:0002371!9.94e-09!591;CL:0000188!1.59e-08!9;CL:0000034!2.84e-08!444;CL:0000192!4.94e-08!42;CL:0000514!4.94e-08!42;CL:0000359!1.03e-07!32;CL:0000548!5.50e-07!679;CL:0000004!5.50e-07!679;CL:0000255!5.50e-07!679;CL:0000012!8.47e-07!682;CL:0002551!8.69e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002561;2.88e-18;2!CL:0002559;3.71e-16;5!CL:0000222;2.06e-10;1!CL:0000228;5.29e-10;1!CL:0002574;5.29e-10;1!CL:0002372;5.29e-10;1!CL:1000306;7.55e-10;4!CL:0002547;7.55e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,2.22e-18,2;CL:0002559,2.33e-16,5;CL:0000228,4.85e-10,1;CL:0002372,4.85e-10,1;CL:0002574,6.91e-10,1;CL:1000306,6.93e-10,4;CL:0002547,6.93e-10,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.68e-08!5;DOID:450!2.68e-08!5;DOID:66!2.68e-08!5;DOID:423!2.68e-08!5;DOID:0080000!2.68e-08!5;DOID:11722!2.68e-08!5 | |ontology_enrichment_disease=DOID:17!2.68e-08!5;DOID:450!2.68e-08!5;DOID:66!2.68e-08!5;DOID:423!2.68e-08!5;DOID:0080000!2.68e-08!5;DOID:11722!2.68e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;7.49e-08;5!DOID:450;7.49e-08;5!DOID:66;7.49e-08;5!DOID:423;7.49e-08;5!DOID:0080000;7.49e-08;5!DOID:11722;7.49e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.55e-08,5;DOID:450,9.55e-08,5;DOID:66,9.55e-08,5;DOID:423,9.55e-08,5;DOID:0080000,9.55e-08,5;DOID:11722,9.55e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.24e-18!83;UBERON:0002329!4.24e-18!83;UBERON:0003077!4.24e-18!83;UBERON:0003059!4.24e-18!83;UBERON:0007282!4.24e-18!83;UBERON:0009618!4.24e-18!83;UBERON:0007285!4.24e-18!83;UBERON:0004290!4.32e-17!70;UBERON:0002097!7.59e-16!40;UBERON:0002199!7.98e-16!45;UBERON:0002416!7.98e-16!45;UBERON:0000486!1.04e-14!82;UBERON:0001134!8.26e-12!61;UBERON:0002036!8.26e-12!61;UBERON:0003082!8.26e-12!61;UBERON:0002385!3.68e-11!63;UBERON:0001015!3.68e-11!63;UBERON:0000383!3.68e-11!63;UBERON:0005256!6.53e-10!143;UBERON:0000475!1.81e-09!365;UBERON:0002067!3.63e-08!9;UBERON:0004016!3.63e-08!9;UBERON:0010083!3.63e-08!9;UBERON:0003102!1.01e-07!95;UBERON:0002049!5.30e-07!79;UBERON:0007798!5.30e-07!79;UBERON:0001637!8.09e-07!42;UBERON:0003509!8.09e-07!42;UBERON:0004572!8.09e-07!42 | |ontology_enrichment_uberon=UBERON:0000914!4.24e-18!83;UBERON:0002329!4.24e-18!83;UBERON:0003077!4.24e-18!83;UBERON:0003059!4.24e-18!83;UBERON:0007282!4.24e-18!83;UBERON:0009618!4.24e-18!83;UBERON:0007285!4.24e-18!83;UBERON:0004290!4.32e-17!70;UBERON:0002097!7.59e-16!40;UBERON:0002199!7.98e-16!45;UBERON:0002416!7.98e-16!45;UBERON:0000486!1.04e-14!82;UBERON:0001134!8.26e-12!61;UBERON:0002036!8.26e-12!61;UBERON:0003082!8.26e-12!61;UBERON:0002385!3.68e-11!63;UBERON:0001015!3.68e-11!63;UBERON:0000383!3.68e-11!63;UBERON:0005256!6.53e-10!143;UBERON:0000475!1.81e-09!365;UBERON:0002067!3.63e-08!9;UBERON:0004016!3.63e-08!9;UBERON:0010083!3.63e-08!9;UBERON:0003102!1.01e-07!95;UBERON:0002049!5.30e-07!79;UBERON:0007798!5.30e-07!79;UBERON:0001637!8.09e-07!42;UBERON:0003509!8.09e-07!42;UBERON:0004572!8.09e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0005933;2.88e-18;2!UBERON:0005942;2.88e-18;2!UBERON:0005932;2.88e-18;2!UBERON:0002073;3.71e-16;5!UBERON:0004797;7.55e-10;4!UBERON:0000415;7.55e-10;4!UBERON:0007240;7.55e-10;4!UBERON:0005742;7.55e-10;4!UBERON:0005734;7.55e-10;4!UBERON:0004664;7.55e-10;4!UBERON:0004663;7.55e-10;4!UBERON:0000947;6.09e-07;21!UBERON:0010191;6.09e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,2.22e-18,2;UBERON:0005942,2.22e-18,2;UBERON:0005932,2.22e-18,2;UBERON:0002073,2.33e-16,5;UBERON:0005086,2.33e-16,5;UBERON:0000415,6.93e-10,4;UBERON:0007240,6.93e-10,4;UBERON:0005742,6.93e-10,4;UBERON:0005734,6.93e-10,4;UBERON:0004664,6.93e-10,4;UBERON:0004663,6.93e-10,4;UBERON:0002097,1.15e-09,41;UBERON:0002199,1.56e-08,46;UBERON:0002416,1.56e-08,46;UBERON:0000947,6.25e-07,21;UBERON:0010191,6.25e-07,21 | |||
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|short_description=p@chr9:118358945..118358954,+ | |short_description=p@chr9:118358945..118358954,+ | ||
}} | }} |
Latest revision as of 22:09, 31 July 2015
Short description: | p@chr9:118358945..118358954, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:118358945..118358954, + |
Coexpression cluster: | C4793_Fibroblast_Hair_Skeletal_mesodermal_Preadipocyte_neuroectodermal_Pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 2.22e-18 | 2 |
hair follicle cell | 2.33e-16 | 5 |
multinucleate cell | 4.85e-10 | 1 |
myotube | 4.85e-10 | 1 |
stromal cell of pancreas | 6.91e-10 | 1 |
fibroblast of tunica adventitia of artery | 6.93e-10 | 4 |
fibroblast of the aortic adventitia | 6.93e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 2.22e-18 | 2 |
hair outer root sheath | 2.22e-18 | 2 |
bulb of hair follicle | 2.22e-18 | 2 |
hair follicle | 2.33e-16 | 5 |
hair follicle placode | 2.33e-16 | 5 |
artery wall | 6.93e-10 | 4 |
tunica adventitia of artery | 6.93e-10 | 4 |
adventitia | 6.93e-10 | 4 |
tunica adventitia of blood vessel | 6.93e-10 | 4 |
aorta tunica adventitia | 6.93e-10 | 4 |
aorta wall | 6.93e-10 | 4 |
skin of body | 1.15e-09 | 41 |
integument | 1.56e-08 | 46 |
integumental system | 1.56e-08 | 46 |
aorta | 6.25e-07 | 21 |
aortic system | 6.25e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.55e-08 | 5 |
myotonic disease | 9.55e-08 | 5 |
muscle tissue disease | 9.55e-08 | 5 |
myopathy | 9.55e-08 | 5 |
muscular disease | 9.55e-08 | 5 |
myotonic dystrophy | 9.55e-08 | 5 |