FFCP PHASE1:Hg19::chr16:89259863..89259878,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:89259863..89259878,+
|short_description=p@chr16:89259863..89259878,+
|description=CAGE_peak_at_chr16:89259863..89259878,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:89259863..89259878,+ | |||
|description=CAGE_peak_at_chr16:89259863..89259878,+ | |||
|id=chr16:89259863..89259878,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.50e-11!180;CL:0000192!2.96e-11!42;CL:0000514!2.96e-11!42;CL:0000187!4.44e-10!54;CL:0000680!5.74e-10!57;CL:0000056!5.74e-10!57;CL:0000355!5.74e-10!57;CL:0000393!1.01e-09!60;CL:0000211!1.01e-09!60;CL:0000183!3.00e-09!59;CL:0002494!4.26e-09!16;CL:0000359!4.50e-09!32;CL:0002321!1.13e-08!248;CL:0000220!4.95e-08!246;CL:0000057!8.12e-08!75;CL:0000222!1.08e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002592;4.51e-17;3!CL:0002494;2.46e-12;16!CL:0000632;7.47e-09;3!CL:0000359;5.45e-08;32!CL:0002581;8.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,3.74e-17,3;CL:0002494,2.39e-12,16;CL:0000632,6.67e-09,3;CL:0000359,1.13e-07,32;CL:0002581,7.57e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;8.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.25e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000490!5.66e-10!138;UBERON:0004290!6.74e-10!70;UBERON:0001134!1.24e-09!61;UBERON:0002036!1.24e-09!61;UBERON:0003082!1.24e-09!61;UBERON:0002385!5.03e-09!63;UBERON:0001015!5.03e-09!63;UBERON:0000383!5.03e-09!63;UBERON:0003914!5.99e-09!118;UBERON:0001637!1.25e-08!42;UBERON:0003509!1.25e-08!42;UBERON:0004572!1.25e-08!42;UBERON:0005256!1.32e-08!143;UBERON:0000486!2.24e-08!82;UBERON:0004872!3.85e-08!84;UBERON:0000914!6.88e-08!83;UBERON:0002329!6.88e-08!83;UBERON:0003077!6.88e-08!83;UBERON:0003059!6.88e-08!83;UBERON:0007282!6.88e-08!83;UBERON:0009618!6.88e-08!83;UBERON:0007285!6.88e-08!83;UBERON:0002100!1.06e-07!216;UBERON:0004573!2.28e-07!33;UBERON:0004571!2.28e-07!33;UBERON:0002049!2.58e-07!79;UBERON:0007798!2.58e-07!79;UBERON:0004535!3.26e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;4.51e-17;3!UBERON:0005985;4.51e-17;3!UBERON:0001621;4.51e-17;3!UBERON:0004573;3.69e-09;33!UBERON:0004571;3.69e-09;33!UBERON:0000948;8.23e-09;22!UBERON:0007100;1.11e-07;25!UBERON:0000029;8.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,3.74e-17,3;UBERON:0003498,1.66e-10,5;UBERON:0005985,1.66e-10,5;UBERON:0004573,1.19e-09,33;UBERON:0004571,1.19e-09,33;UBERON:0000948,4.92e-08,24;UBERON:0005498,4.92e-08,24;UBERON:0004140,4.92e-08,24;UBERON:0009881,4.92e-08,24;UBERON:0004141,4.92e-08,24;UBERON:0003084,4.92e-08,24;UBERON:0007005,4.92e-08,24;UBERON:0004139,4.92e-08,24;UBERON:0004291,4.92e-08,24;UBERON:0003914,9.78e-08,117;UBERON:0004872,1.93e-07,83;UBERON:0001637,2.49e-07,42;UBERON:0003509,2.49e-07,42;UBERON:0004572,2.49e-07,42;UBERON:0000490,2.70e-07,148;UBERON:0005256,3.84e-07,122;UBERON:0007100,4.48e-07,27;UBERON:0000029,7.15e-07,1 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0,0.487932798790507,0,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0,0,0,0.144846518960824,0,0.973269740605272,0.0945348171640679,0,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,1.69592382577203,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0,0,0,0.286836620748814,0,0,4.2699598291882,0.74000264525148,0.622422070799533,0.538842688278752,0.980771418680752,0.151357427644931,0,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0,0,0.340296549480063,0,0,0,0,0.309157587715317,0,0.18611685633159,0.168776332241266,0.194874010322397,0.504867548488229,0.184099797284599,0.161646056818812,0,0,0.508681776931463,0,0,0,0.609868530647977,0.397589304964456,0,0,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0.38474715694639,0,1.40241773803446,2.8810180793198,4.41026134156626,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0.57191197463259,1.08524321078289,0,0,0.355391948742546,0,0,0.871533458600294,0.399891964728228,0,0,0,0.239624855491583,0,0,0.579125226670317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0.391602314925481,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,1.53512174720011,0,1.48418066444991,0.616838775210622,0.177561725313127,0.246381468041427,0,0.464841513839837,0,0,0,0.114814448164607,0.546273504020151,0.393373244878272,0.902399225814824,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0.290033387828457,0,0.178064071293475,0.165284915360978,0,0.255225424989168,0.50578890427775,0.929691098594572,0.62962469366128,1.3940745403212,0,0,0.869932992075073,0.55597265731176,0.572499546967965,0.744316738719335,0,0.953150969619124,0,0,0,3.13979456079692,0.359744915166629,0.54907405947211,0.706874414074119,1.01091240786658,1.58510321173008,1.68503382495592,0.975267478179181,1.70599442741899,0,0,0.707027159768564,0,0,0,0,0,0,0,0.6196469961995,0.563391205064483,0,0,0.7133421029625,0.709522128141196,0,0,0.379473173765715,0.699869440489966,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.447352215784832,1.00109485027145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0,0.694238953340524,0.0979923974143777,0,0.17472666824203,1.89184635718778,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0.0824158583811665,0.471824806979294,0,0,0,0,0.482259445395058,0.275078873194468,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0.339936274560377,0,0,0,0,0.171086837884329,0,0.533937062838473,0,0,1.48849806543585,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,1.63599316893057,0,0,0,0.889811221596536,9.15360273587694,0,0.777186002913902,0.295710299979268,0.796483835818512,1.79921244865442,0.155262956876259,0.414706207840855,0,1.5652351854352,0.300515217994437,0,0,0.181848659202559,2.68526392606221,0,0.796191777397232,0,0,0,0,0.192619830407303,0,0.521988583930423,0.680117776536817,0,0,0,0,0,2.29695889729645,0,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0.419638523158333,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0.954013051960256,0,0,0,2.7562092961788,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,1.06172751012966,0,0,0,0,0,0,0,14.8487662134288,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0.889851215136553,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0.447421727191169,0,0,0,0,1.1598144313382,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0.655678681511872,0,0,0.235676547101626,0,0,0,0.509781344063451,0,0.322289439867886,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0.713921808193872,0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| ||
|short_description=p@chr16:89259863..89259878,+ | |||
}} | }} |
Latest revision as of 13:25, 25 July 2015
Short description: | p@chr16:89259863..89259878, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:89259863..89259878, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 3.74e-17 | 3 |
cardiocyte | 2.39e-12 | 16 |
hepatic stellate cell | 6.67e-09 | 3 |
vascular associated smooth muscle cell | 1.13e-07 | 32 |
perirenal preadipocyte | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 3.74e-17 | 3 |
heart blood vessel | 1.66e-10 | 5 |
coronary vessel | 1.66e-10 | 5 |
systemic artery | 1.19e-09 | 33 |
systemic arterial system | 1.19e-09 | 33 |
heart | 4.92e-08 | 24 |
primitive heart tube | 4.92e-08 | 24 |
primary heart field | 4.92e-08 | 24 |
anterior lateral plate mesoderm | 4.92e-08 | 24 |
heart tube | 4.92e-08 | 24 |
heart primordium | 4.92e-08 | 24 |
cardiac mesoderm | 4.92e-08 | 24 |
cardiogenic plate | 4.92e-08 | 24 |
heart rudiment | 4.92e-08 | 24 |
epithelial tube | 9.78e-08 | 117 |
splanchnic layer of lateral plate mesoderm | 1.93e-07 | 83 |
artery | 2.49e-07 | 42 |
arterial blood vessel | 2.49e-07 | 42 |
arterial system | 2.49e-07 | 42 |
unilaminar epithelium | 2.70e-07 | 148 |
trunk mesenchyme | 3.84e-07 | 122 |
primary circulatory organ | 4.48e-07 | 27 |
lymph node | 7.15e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.25e-07 | 1 |