FFCP PHASE1:Hg19::chr13:31318135..31318154,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:31318135..31318154,+ | |||
|description=CAGE_peak_at_chr13:31318135..31318154,+ | |description=CAGE_peak_at_chr13:31318135..31318154,+ | ||
|id=chr13:31318135..31318154,+ | |id=chr13:31318135..31318154,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.76e-07!42;CL:0002371!7.18e-07!591;CL:0000144!9.76e-07!625 | |ontology_enrichment_celltype=CL:0002057!1.76e-07!42;CL:0002371!7.18e-07!591;CL:0000144!9.76e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.55e-21;3!CL:0000067;1.55e-21;3!CL:0005012;1.55e-21;3!CL:0002304;1.55e-21;3!CL:0000771;1.19e-15;2!CL:0000094;1.53e-14;8!CL:0000081;1.29e-10;11!CL:0002615;4.41e-10;3!CL:0000632;4.41e-10;3!CL:0002599;2.33e-08;1!CL:0002616;2.33e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.35e-21,3;CL:0000067,1.35e-21,3;CL:0005012,1.35e-21,3;CL:0002304,1.35e-21,3;CL:0000771,1.07e-15,2;CL:0000094,1.36e-14,8;CL:0000081,1.19e-10,11;CL:0000632,2.98e-10,3;CL:0002615,3.58e-10,3;CL:0002616,2.02e-08,1;CL:0002599,2.69e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.33e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!1.24e-09!11;UBERON:0006876!1.24e-09!11;UBERON:0000488!9.58e-07!4 | |ontology_enrichment_uberon=UBERON:0002200!1.24e-09!11;UBERON:0006876!1.24e-09!11;UBERON:0000488!9.58e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.55e-21;3!UBERON:0001775;1.55e-21;3!UBERON:0000488;2.64e-16;4!UBERON:0002203;4.75e-11;6!UBERON:0001768;4.75e-11;6!UBERON:0002200;4.75e-11;6!UBERON:0006876;1.87e-10;11!UBERON:0007625;2.31e-10;11!UBERON:0001801;3.63e-08;14!UBERON:0004913;5.24e-08;1!UBERON:0003703;5.24e-08;1!UBERON:0001174;5.24e-08;1!UBERON:0004914;5.24e-08;1!UBERON:0000478;4.20e-07;24!UBERON:0002331;9.72e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.35e-21,3;UBERON:0001775,1.35e-21,3;UBERON:0000488,2.38e-16,4;UBERON:0002203,4.44e-11,6;UBERON:0001768,4.44e-11,6;UBERON:0002200,4.44e-11,6;UBERON:0006876,1.81e-10,11;UBERON:0007625,2.55e-10,11;UBERON:0007499,2.30e-09,25;UBERON:0009856,5.51e-09,26;UBERON:0001801,3.91e-08,14;UBERON:0004913,6.68e-08,1;UBERON:0003703,6.68e-08,1;UBERON:0001174,6.68e-08,1;UBERON:0004914,6.68e-08,1;UBERON:0008835,1.64e-07,22;UBERON:0003894,1.64e-07,22;UBERON:0009854,3.56e-07,23;UBERON:0000478,4.31e-07,24 | |||
|phase1_expression=0.54503513781167,0.214100523890983,2.53717927372748,0,1.78784437770915,2.61701557230111,0,0,0.261185628199839,4.17747692052565,0,0.436882744260345,2.63766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,2.36018566109342,0.383829398097213,0.619264493264304,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0.434021741431704,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0.752969358170419,0.272906150057846,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0,0,0.870627715885752,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0.486634870302636,1.03988298880475,3.54767035940102,2.89854792787316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.490385709340376,0.454072282934794,3.45705554687999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,2.94017422771084,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0,0,0,0,0.231860809950154,2.23076519048061,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0.646358578788889,0,0,0.797814349754612,0,0,0,0,1.00084595560703,1.62786481617433,2.46972101034231,0,0,0.791951872933429,0,2.61460037580088,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,2.99602809578873,0,0,0,0.500170521059677,0,0.623912584592421,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,3.32870879020994,0.907170879989041,0.496215615637554,0,0.841980283299221,0.640695746278505,0,0,0,0,0,0,0,0,0,1.20303882181971,0,0.459257792658427,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.537101224341368,0,0.426133137080504,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0.762520775695299,0.511795582622668,0.855877976067841,0,0,0.179872457583315,0.823611089208164,1.06031162111118,0,0,0,2.43816869544795,0,0,0,0.848432591722276,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0.860468113224309,0.392996164052485,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0.313359791546046,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.480952921509202,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0.381382095467167,0,0,0.451261970095544,0.20170506870352,0,0,0,1.03499260351932,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0.348724276104376,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0.54503513781167,0.214100523890983,2.53717927372748,0,1.78784437770915,2.61701557230111,0,0,0.261185628199839,4.17747692052565,0,0.436882744260345,2.63766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,2.36018566109342,0.383829398097213,0.619264493264304,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0.434021741431704,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0.752969358170419,0.272906150057846,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0,0,0.870627715885752,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0.486634870302636,1.03988298880475,3.54767035940102,2.89854792787316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.490385709340376,0.454072282934794,3.45705554687999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,2.94017422771084,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0,0,0,0,0.231860809950154,2.23076519048061,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0.646358578788889,0,0,0.797814349754612,0,0,0,0,1.00084595560703,1.62786481617433,2.46972101034231,0,0,0.791951872933429,0,2.61460037580088,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,2.99602809578873,0,0,0,0.500170521059677,0,0.623912584592421,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,3.32870879020994,0.907170879989041,0.496215615637554,0,0.841980283299221,0.640695746278505,0,0,0,0,0,0,0,0,0,1.20303882181971,0,0.459257792658427,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.537101224341368,0,0.426133137080504,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0.762520775695299,0.511795582622668,0.855877976067841,0,0,0.179872457583315,0.823611089208164,1.06031162111118,0,0,0,2.43816869544795,0,0,0,0.848432591722276,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0.860468113224309,0.392996164052485,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0.313359791546046,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.480952921509202,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0.381382095467167,0,0,0.451261970095544,0.20170506870352,0,0,0,1.03499260351932,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0.348724276104376,0.173858272302579,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr13:31318135..31318154,+ | |short_description=p@chr13:31318135..31318154,+ | ||
}} | }} |
Latest revision as of 15:34, 24 July 2015
Short description: | p@chr13:31318135..31318154, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:31318135..31318154, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.35e-21 | 3 |
ciliated epithelial cell | 1.35e-21 | 3 |
multi-ciliated epithelial cell | 1.35e-21 | 3 |
non-pigmented ciliary epithelial cell | 1.35e-21 | 3 |
eosinophil | 1.07e-15 | 2 |
granulocyte | 1.36e-14 | 8 |
blood cell | 1.19e-10 | 11 |
hepatic stellate cell | 2.98e-10 | 3 |
adipocyte of omentum tissue | 3.58e-10 | 3 |
perirenal adipocyte cell | 2.02e-08 | 1 |
smooth muscle cell of the esophagus | 2.69e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.35e-21 | 3 |
ciliary body | 1.35e-21 | 3 |
atypical epithelium | 2.38e-16 | 4 |
vasculature of eye | 4.44e-11 | 6 |
uvea | 4.44e-11 | 6 |
vasculature of head | 4.44e-11 | 6 |
vasculature of organ | 1.81e-10 | 11 |
pigment epithelium of eye | 2.55e-10 | 11 |
epithelial sac | 2.30e-09 | 25 |
sac | 5.51e-09 | 26 |
anterior segment of eyeball | 3.91e-08 | 14 |
hepatopancreatic ampulla | 6.68e-08 | 1 |
extrahepatic bile duct | 6.68e-08 | 1 |
common bile duct | 6.68e-08 | 1 |
duodenal papilla | 6.68e-08 | 1 |
hepatic diverticulum | 1.64e-07 | 22 |
liver primordium | 1.64e-07 | 22 |
digestive tract diverticulum | 3.56e-07 | 23 |
extraembryonic structure | 4.31e-07 | 24 |