FFCP PHASE1:Hg19::chr12:7037035..7037052,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1822 | |EntrezGene=1822 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3033 | |HGNC=3033 | ||
|TSSclassifier=strong | |||
|UniProt=P54259 | |UniProt=P54259 | ||
|association_with_transcript=-423bp_to_ENST00000396684_5end | |association_with_transcript=-423bp_to_ENST00000396684_5end | ||
|cluster_id=chr12:7037035..7037052,+ | |||
|description=CAGE_peak_8_at_ATN1_5end | |description=CAGE_peak_8_at_ATN1_5end | ||
|id=chr12:7037035..7037052,+ | |id=chr12:7037035..7037052,+ | ||
|ontology_enrichment_celltype=CL:0000115!1.86e-13!35;CL:0000222!5.00e-13!119;CL:0002139!9.92e-13!24;CL:0002078!2.80e-12!44;CL:0000071!1.84e-10!18;CL:0002546!1.84e-10!18;CL:0000213!5.96e-09!57;CL:0000215!5.96e-09!57;CL:0002321!2.94e-07!248;CL:0000055!3.75e-07!180;CL:0000220!4.06e-07!246;CL:1000413!4.45e-07!9 | |ontology_enrichment_celltype=CL:0000115!1.86e-13!35;CL:0000222!5.00e-13!119;CL:0002139!9.92e-13!24;CL:0002078!2.80e-12!44;CL:0000071!1.84e-10!18;CL:0002546!1.84e-10!18;CL:0000213!5.96e-09!57;CL:0000215!5.96e-09!57;CL:0002321!2.94e-07!248;CL:0000055!3.75e-07!180;CL:0000220!4.06e-07!246;CL:1000413!4.45e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.39e-15;24!CL:0000115;2.29e-14;36!CL:0000071;3.47e-13;18!CL:0002078;1.08e-09;45!CL:1000413;1.82e-08;9!CL:0000213;2.03e-07;58!CL:0000215;2.03e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.02e-17,36;CL:0002139,8.29e-16,24;CL:0002078,4.47e-15,45;CL:0000071,4.87e-13,18;CL:0002546,4.87e-13,18;CL:0000222,3.39e-12,121;CL:0000213,1.05e-10,58;CL:0000215,1.05e-10,58;CL:1000413,2.42e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002546;3.47e-13;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!6.51e-30!241;UBERON:0000477!8.38e-29!286;UBERON:0000025!2.23e-25!194;UBERON:0000119!3.42e-20!312;UBERON:0000483!1.36e-19!309;UBERON:0000055!1.06e-17!69;UBERON:0002049!1.26e-17!79;UBERON:0007798!1.26e-17!79;UBERON:0003914!3.02e-17!118;UBERON:0000475!1.97e-15!365;UBERON:0000468!5.59e-15!659;UBERON:0001981!1.30e-14!60;UBERON:0007500!1.30e-14!60;UBERON:0004537!1.30e-14!60;UBERON:0006965!1.30e-14!60;UBERON:0000467!2.22e-14!625;UBERON:0000480!2.47e-14!626;UBERON:0000481!3.88e-14!347;UBERON:0004872!8.85e-14!84;UBERON:0007023!1.70e-11!115;UBERON:0001009!2.39e-11!113;UBERON:0001986!1.84e-10!18;UBERON:0004638!1.84e-10!18;UBERON:0004852!1.84e-10!18;UBERON:0004535!2.18e-10!110;UBERON:0001637!9.63e-10!42;UBERON:0003509!9.63e-10!42;UBERON:0004572!9.63e-10!42;UBERON:0001049!1.67e-08!57;UBERON:0005068!1.67e-08!57;UBERON:0006241!1.67e-08!57;UBERON:0007135!1.67e-08!57;UBERON:0000922!2.40e-08!612;UBERON:0000487!6.44e-08!22;UBERON:0002050!9.71e-08!605;UBERON:0005423!9.71e-08!605;UBERON:0004573!1.12e-07!33;UBERON:0004571!1.12e-07!33;UBERON:0002100!1.24e-07!216;UBERON:0002616!1.41e-07!59;UBERON:0000923!1.50e-07!604;UBERON:0005291!1.50e-07!604;UBERON:0006598!1.50e-07!604;UBERON:0002532!1.50e-07!604;UBERON:0000490!1.83e-07!138;UBERON:0003075!2.05e-07!86;UBERON:0007284!2.05e-07!86;UBERON:0005256!2.19e-07!143;UBERON:0006914!2.67e-07!25;UBERON:0003915!4.45e-07!9;UBERON:0004700!4.45e-07!9;UBERON:0001917!4.45e-07!9;UBERON:0003103!6.18e-07!69 | |ontology_enrichment_uberon=UBERON:0004111!6.51e-30!241;UBERON:0000477!8.38e-29!286;UBERON:0000025!2.23e-25!194;UBERON:0000119!3.42e-20!312;UBERON:0000483!1.36e-19!309;UBERON:0000055!1.06e-17!69;UBERON:0002049!1.26e-17!79;UBERON:0007798!1.26e-17!79;UBERON:0003914!3.02e-17!118;UBERON:0000475!1.97e-15!365;UBERON:0000468!5.59e-15!659;UBERON:0001981!1.30e-14!60;UBERON:0007500!1.30e-14!60;UBERON:0004537!1.30e-14!60;UBERON:0006965!1.30e-14!60;UBERON:0000467!2.22e-14!625;UBERON:0000480!2.47e-14!626;UBERON:0000481!3.88e-14!347;UBERON:0004872!8.85e-14!84;UBERON:0007023!1.70e-11!115;UBERON:0001009!2.39e-11!113;UBERON:0001986!1.84e-10!18;UBERON:0004638!1.84e-10!18;UBERON:0004852!1.84e-10!18;UBERON:0004535!2.18e-10!110;UBERON:0001637!9.63e-10!42;UBERON:0003509!9.63e-10!42;UBERON:0004572!9.63e-10!42;UBERON:0001049!1.67e-08!57;UBERON:0005068!1.67e-08!57;UBERON:0006241!1.67e-08!57;UBERON:0007135!1.67e-08!57;UBERON:0000922!2.40e-08!612;UBERON:0000487!6.44e-08!22;UBERON:0002050!9.71e-08!605;UBERON:0005423!9.71e-08!605;UBERON:0004573!1.12e-07!33;UBERON:0004571!1.12e-07!33;UBERON:0002100!1.24e-07!216;UBERON:0002616!1.41e-07!59;UBERON:0000923!1.50e-07!604;UBERON:0005291!1.50e-07!604;UBERON:0006598!1.50e-07!604;UBERON:0002532!1.50e-07!604;UBERON:0000490!1.83e-07!138;UBERON:0003075!2.05e-07!86;UBERON:0007284!2.05e-07!86;UBERON:0005256!2.19e-07!143;UBERON:0006914!2.67e-07!25;UBERON:0003915!4.45e-07!9;UBERON:0004700!4.45e-07!9;UBERON:0001917!4.45e-07!9;UBERON:0003103!6.18e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.47e-13;18!UBERON:0001986;3.47e-13;18!UBERON:0004852;3.47e-13;18!UBERON:0000487;3.20e-09;22!UBERON:0000055;3.22e-09;65!UBERON:0007500;1.11e-08;56!UBERON:0001981;1.11e-08;56!UBERON:0004537;1.11e-08;56!UBERON:0006914;1.14e-08;25!UBERON:0003915;1.82e-08;9!UBERON:0004700;1.82e-08;9!UBERON:0001917;1.82e-08;9!UBERON:0003914;7.29e-08;74!UBERON:0001637;8.39e-08;42!UBERON:0003509;8.39e-08;42!UBERON:0004572;8.39e-08;42!UBERON:0002049;1.84e-07;75!UBERON:0007798;1.84e-07;75 | |||
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| ||
|short_description=p8@ATN1 | |short_description=p8@ATN1 | ||
}} | }} |
Latest revision as of 07:27, 20 September 2015
Short description: | p8@ATN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ATN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -423bp_to_ENST00000396684_5end |
EntrezGene: | ATN1 |
HGNC: | 3033 |
UniProt: | P54259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.02e-17 | 36 |
endothelial cell of vascular tree | 8.29e-16 | 24 |
meso-epithelial cell | 4.47e-15 | 45 |
blood vessel endothelial cell | 4.87e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.87e-13 | 18 |
mesodermal cell | 3.39e-12 | 121 |
lining cell | 1.05e-10 | 58 |
barrier cell | 1.05e-10 | 58 |
endothelial cell of artery | 2.42e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 6.31e-25 | 240 |
tube | 2.38e-22 | 192 |
vessel | 9.47e-19 | 68 |
vasculature | 4.16e-18 | 78 |
vascular system | 4.16e-18 | 78 |
epithelial tube | 2.58e-16 | 117 |
epithelial tube open at both ends | 2.76e-15 | 59 |
blood vessel | 2.76e-15 | 59 |
blood vasculature | 2.76e-15 | 59 |
vascular cord | 2.76e-15 | 59 |
cell layer | 5.48e-15 | 309 |
splanchnic layer of lateral plate mesoderm | 1.02e-14 | 83 |
epithelium | 2.09e-14 | 306 |
circulatory system | 5.85e-14 | 112 |
adult organism | 2.86e-13 | 114 |
blood vessel endothelium | 4.87e-13 | 18 |
endothelium | 4.87e-13 | 18 |
cardiovascular system endothelium | 4.87e-13 | 18 |
cardiovascular system | 9.19e-13 | 109 |
artery | 3.91e-09 | 42 |
arterial blood vessel | 3.91e-09 | 42 |
arterial system | 3.91e-09 | 42 |
simple squamous epithelium | 3.99e-09 | 22 |
squamous epithelium | 1.55e-08 | 25 |
endothelial tube | 2.42e-08 | 9 |
arterial system endothelium | 2.42e-08 | 9 |
endothelium of artery | 2.42e-08 | 9 |
neural tube | 3.21e-07 | 56 |
neural rod | 3.21e-07 | 56 |
future spinal cord | 3.21e-07 | 56 |
neural keel | 3.21e-07 | 56 |