FFCP PHASE1:Hg19::chr12:117316866..117316876,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:117316866..117316876,+ | |||
|description=CAGE_peak_at_chr12:117316866..117316876,+ | |description=CAGE_peak_at_chr12:117316866..117316876,+ | ||
|id=chr12:117316866..117316876,+ | |id=chr12:117316866..117316876,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.64e-07!10;CL:0000541!1.64e-07!10;CL:0002541!1.81e-07!3;CL:0000066!3.82e-07!254 | |ontology_enrichment_celltype=CL:0000148!1.64e-07!10;CL:0000541!1.64e-07!10;CL:0002541!1.81e-07!3;CL:0000066!3.82e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002567;7.89e-17;3!CL:0002541;9.24e-17;3!CL:0000319;5.37e-13;1!CL:0000148;3.15e-11;10!CL:0000147;3.59e-08;14!CL:0000159;3.92e-07;2!CL:0002535;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,6.22e-17,3;CL:0002541,7.90e-17,3;CL:0000319,5.38e-13,1;CL:0000148,2.94e-11,10;CL:0000541,2.94e-11,10;CL:0000147,3.42e-08,14;CL:0002535,3.09e-07,2;CL:0000159,3.93e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.89e-13!106;DOID:1749!3.22e-13!14;DOID:0050687!4.35e-13!143;DOID:162!5.59e-08!235;DOID:14566!1.43e-07!239 | |ontology_enrichment_disease=DOID:305!1.89e-13!106;DOID:1749!3.22e-13!14;DOID:0050687!4.35e-13!143;DOID:162!5.59e-08!235;DOID:14566!1.43e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3030;5.37e-13;1!DOID:4362;2.84e-10;5!DOID:1749;4.59e-08;14!DOID:4074;3.92e-07;2!DOID:4905;3.92e-07;2!DOID:3498;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,5.38e-13,1;DOID:4362,2.98e-10,5;DOID:1749,4.16e-08,14;DOID:4074,4.42e-07,2;DOID:4905,4.42e-07,2;DOID:3498,4.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.63e-08!14;UBERON:0000158!2.63e-08!14;UBERON:0003124!1.72e-07!7;UBERON:0000476!1.81e-07!3;UBERON:0000920!1.81e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!2.63e-08!14;UBERON:0000158!2.63e-08!14;UBERON:0003124!1.72e-07!7;UBERON:0000476!1.81e-07!3;UBERON:0000920!1.81e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.24e-17;3!UBERON:0000920;9.24e-17;3!UBERON:0000002;1.04e-08;6!UBERON:0001560;1.04e-08;6!UBERON:0006955;3.92e-07;2!UBERON:0004801;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.90e-17,3;UBERON:0000002,1.08e-08,6;UBERON:0001560,1.08e-08,6;UBERON:0003124,9.88e-08,7;UBERON:0006955,3.09e-07,2;UBERON:0004801,3.09e-07,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.400395987036012,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,1.52795370223311,5.86087236050235,0,0.925447434329912,1.20137223137567,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11538995422883,0.0769502585037971,0.113942055847001,0.46112780877612,0,0,1.27600463892768,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,1.17398771359254,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.685946781900644,1.74118413160805,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0.126621591911757,0.586654148204409,0,0,0.19980960958213,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.136203406111576,0,0.275078873194468,0,0,0,0.121499113316049,0.335434687599266,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0.244736704506468,0,0,0,1.41351316756705,0.578742114812744,0,0.256241518587947,2.07258205038719,0,0.414775308455192,0,0,0,0,1.2288645437686,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0.294443155503077,0.11796972334774,0,0.924205329202706,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0,0.177404740325278,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0.320965466756673,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.400395987036012,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,1.52795370223311,5.86087236050235,0,0.925447434329912,1.20137223137567,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11538995422883,0.0769502585037971,0.113942055847001,0.46112780877612,0,0,1.27600463892768,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,1.17398771359254,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.685946781900644,1.74118413160805,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0.126621591911757,0.586654148204409,0,0,0.19980960958213,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.136203406111576,0,0.275078873194468,0,0,0,0.121499113316049,0.335434687599266,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0.244736704506468,0,0,0,1.41351316756705,0.578742114812744,0,0.256241518587947,2.07258205038719,0,0.414775308455192,0,0,0,0,1.2288645437686,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0.294443155503077,0.11796972334774,0,0.924205329202706,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0,0.177404740325278,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0.320965466756673,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:117316866..117316876,+ | |short_description=p@chr12:117316866..117316876,+ | ||
}} | }} |
Latest revision as of 05:26, 24 July 2015
Short description: | p@chr12:117316866..117316876, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:117316866..117316876, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 6.22e-17 | 3 |
chorionic membrane mesenchymal stem cell | 7.90e-17 | 3 |
mucus secreting cell | 5.38e-13 | 1 |
melanocyte | 2.94e-11 | 10 |
melanoblast | 2.94e-11 | 10 |
pigment cell | 3.42e-08 | 14 |
epithelial cell of cervix | 3.09e-07 | 2 |
seromucus secreting cell | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.90e-17 | 3 |
uterine cervix | 1.08e-08 | 6 |
neck of organ | 1.08e-08 | 6 |
chorion | 9.88e-08 | 7 |
uterine epithelium | 3.09e-07 | 2 |
cervix epithelium | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 5.38e-13 | 1 |
cervical cancer | 2.98e-10 | 5 |
squamous cell carcinoma | 4.16e-08 | 14 |
pancreas adenocarcinoma | 4.42e-07 | 2 |
pancreatic carcinoma | 4.42e-07 | 2 |
pancreatic ductal adenocarcinoma | 4.42e-07 | 2 |