FFCP PHASE1:Hg19::chr11:65554528..65554546,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5017 | |EntrezGene=5017 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8525 | |HGNC=8525 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001ofp.2_5end | |association_with_transcript=0bp_to_uc001ofp.2_5end | ||
|cluster_id=chr11:65554528..65554546,+ | |||
|description=CAGE_peak_1_at_OVOL1_5end | |description=CAGE_peak_1_at_OVOL1_5end | ||
|id=chr11:65554528..65554546,+ | |id=chr11:65554528..65554546,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.84e-19!43;CL:0000066!1.54e-17!254;CL:0000223!5.80e-14!59;CL:0002251!1.73e-10!21;CL:0002368!2.20e-08!13;CL:0000039!1.04e-07!7;CL:0000586!1.04e-07!7 | |ontology_enrichment_celltype=CL:0002076!1.84e-19!43;CL:0000066!1.54e-17!254;CL:0000223!5.80e-14!59;CL:0002251!1.73e-10!21;CL:0002368!2.20e-08!13;CL:0000039!1.04e-07!7;CL:0000586!1.04e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.29e-14;42!CL:0002251;2.20e-11;20!CL:0000039;2.09e-09;7!CL:0000586;2.09e-09;7!CL:0002368;2.04e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.83e-19,42;CL:0000066,6.78e-19,253;CL:0000223,1.27e-14,58;CL:0002251,1.99e-11,20;CL:0000039,2.49e-09,7;CL:0000586,2.49e-09,7;CL:0002368,1.81e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;5.22e-08;58!UBERON:0009117;7.47e-07;10!UBERON:0005564;7.47e-07;10 | |||
|ontology_enrichment_disease=DOID:305!3.91e-12!106;DOID:1749!4.27e-09!14;DOID:299!2.37e-08!25;DOID:0050687!9.06e-08!143 | |ontology_enrichment_disease=DOID:305!3.91e-12!106;DOID:1749!4.27e-09!14;DOID:299!2.37e-08!25;DOID:0050687!9.06e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:299;5.24e-11;25!DOID:1749;9.54e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.80e-14,106;DOID:299,5.06e-11,25;DOID:1749,8.57e-10,14;DOID:0050687,9.22e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.97e-21!169;UBERON:0000925!7.97e-21!169;UBERON:0006595!7.97e-21!169;UBERON:0001007!9.40e-17!155;UBERON:0001555!9.40e-17!155;UBERON:0007026!9.40e-17!155;UBERON:0004921!1.04e-13!129;UBERON:0004185!1.04e-13!129;UBERON:0000464!2.00e-13!104;UBERON:0001004!1.20e-12!72;UBERON:0000161!5.60e-12!35;UBERON:0000466!2.41e-11!126;UBERON:0000077!2.70e-11!130;UBERON:0000166!1.22e-10!21;UBERON:0005911!8.77e-09!82;UBERON:0005153!4.44e-08!37;UBERON:0000344!7.85e-08!12;UBERON:0001041!9.49e-08!98;UBERON:0000165!1.08e-07!28;UBERON:0000930!1.08e-07!28;UBERON:0001008!1.24e-07!45;UBERON:0000065!1.40e-07!53;UBERON:0005178!1.41e-07!34;UBERON:0002224!1.41e-07!34;UBERON:0002553!2.84e-07!70;UBERON:0005181!3.44e-07!35;UBERON:0006554!4.10e-07!44;UBERON:0003135!6.47e-07!11 | |ontology_enrichment_uberon=UBERON:0004119!7.97e-21!169;UBERON:0000925!7.97e-21!169;UBERON:0006595!7.97e-21!169;UBERON:0001007!9.40e-17!155;UBERON:0001555!9.40e-17!155;UBERON:0007026!9.40e-17!155;UBERON:0004921!1.04e-13!129;UBERON:0004185!1.04e-13!129;UBERON:0000464!2.00e-13!104;UBERON:0001004!1.20e-12!72;UBERON:0000161!5.60e-12!35;UBERON:0000466!2.41e-11!126;UBERON:0000077!2.70e-11!130;UBERON:0000166!1.22e-10!21;UBERON:0005911!8.77e-09!82;UBERON:0005153!4.44e-08!37;UBERON:0000344!7.85e-08!12;UBERON:0001041!9.49e-08!98;UBERON:0000165!1.08e-07!28;UBERON:0000930!1.08e-07!28;UBERON:0001008!1.24e-07!45;UBERON:0000065!1.40e-07!53;UBERON:0005178!1.41e-07!34;UBERON:0002224!1.41e-07!34;UBERON:0002553!2.84e-07!70;UBERON:0005181!3.44e-07!35;UBERON:0006554!4.10e-07!44;UBERON:0003135!6.47e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.04e-13;33!UBERON:0001555;3.96e-09;54!UBERON:0005409;7.26e-09;22!UBERON:0001041;7.40e-08;14!UBERON:0000160;9.03e-08;17!UBERON:0000161;1.09e-07;19!UBERON:0000166;1.09e-07;19!UBERON:0000974;1.16e-07;6!UBERON:0000165;2.19e-07;28!UBERON:0000344;3.89e-07;20!UBERON:0003135;4.44e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.00e-18,160;UBERON:0000925,4.00e-18,160;UBERON:0006595,4.00e-18,160;UBERON:0001007,6.70e-15,145;UBERON:0001555,6.70e-15,145;UBERON:0007026,6.70e-15,145;UBERON:0004921,1.25e-12,118;UBERON:0000161,6.23e-11,36;UBERON:0000166,3.89e-09,22;UBERON:0001008,6.01e-08,48;UBERON:0000160,8.25e-08,17;UBERON:0005156,1.23e-07,59;UBERON:0000990,1.23e-07,59;UBERON:0005409,1.93e-07,25;UBERON:0006554,2.37e-07,47;UBERON:0000344,3.68e-07,20;UBERON:0003133,3.99e-07,48;UBERON:0003135,4.82e-07,11;UBERON:0000165,5.05e-07,29;UBERON:0000930,5.05e-07,29;UBERON:0001004,9.71e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.09340350391728,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.328402357799783,0.393553906568396,0,0,0.464448369948228,5.51652734687356,3.91567694411725,6.28581817283539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61958150995425,17.486173838042,31.1458931938921,1.9472843619281,1.0447784237956,1.99436940778298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9550096685611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73043412653187,2.72746120590835,0.860413786167011,2.31750041646231,1.45782745153634,1.39432731443422,3.73179798055334,3.5324919122588,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11723694384549,0,5.1582634142054,10.1161577931858,4.2222168412885,3.88871469665824,0,0,0,0,0,0,0,0,18.1747011530633,17.1697232418975,0.492434012174795,2.34004265139238,4.7561971932393,0,0,1.55952606966625,1.16426079513703,0.871901815541886,6.13412286664338,0.985326475791887,0,0.414656231081544,0,0.37872730027914,0.063497894292169,0,0,0,0.514137463516618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,11.8219752864041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5147721144711,0.802025881213139,6.16942625870505,0,0,0,9.92639148396306,5.85316561993552,2.35304930753057,2.92278449306521,1.89992932007176,0,0,0,0,0,0,3.05851527654046,5.81753206250107,0.447749509444357,0,0,0,0,0,3.50339439602256,0,0,1.72279661398852,9.1008434445113,0,0,0,0,0,0,0,0,0,2.80984356113663,2.49847087574638,0.765676274967505,4.55210013849975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88666338176536,4.69211592875051,1.08890984861323,3.95403963262472,2.15252686335615,8.42357378338128,20.3977870626871,0.918893600827838,0,0,0,0,0,0,0,0,0,0,46.557641036396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7753871307098,0,0,0,0,0,0,0,0,0,0,18.5269135004138,0,0,0,0,46.5551745238496,2.96964680832639,34.401998635114,0,0,0,0,0,0.398495976502139,2.76283915531148,1.25966373927138,0,0,0,8.08815160325942,1.79021174675609,0,3.05794557474494,0,0,0,0,0,10.6775382044946,9.09583999960435,2.17499872630438,2.95862965542299,3.81380475439149,2.83665218121524,0,0,0,0,0.120596438625408,0,0,0,0,0,35.4136310467652,5.54041861227339,0,38.504172032806,19.5671664813303,10.7560898202788,17.2260626255237,4.76307485689684,1.5991043280559,0,0,0,0,0,0,0,0,0,10.7733653385037,7.77441892886674,0,9.95261931078505,7.96118080530053,29.9404771017476,0,0,0,0,0,0,0,3.52196314077761,0,1.57833761139756,6.04953580243319,0,0,0.150323419414493,0,0,0,0,0,5.97680046662565,0,4.16543372004314,84.3714541737792,5.13649318824375,0.698906672968121,0,0,0,0,43.3540903703235,0,1.80784592624426,0,0,0,6.2576442475137,3.28651163031288,3.84215390530835,0,6.62815918908888,0,0,0,0,43.6033964041072,0,0,0,0,0,0,0,0,0,0,0,0,6.38972801596772,0,0,0.134366944973453,0,1.16495949527454,0,0,0,0,0,0,0,0.803765742325096,1.37539436597234,0.415440338029185,8.77398177050852,85.8920169559324,0,8.72130187758092,2.99461687736953,7.39609692703473,0,0,8.44426868205559,0,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0,0,0,17.6203755579168,0.747511887973863,0.157204305099666,2.07119527673598,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,5.4941152073243,0,0.106691729694141,0,0,0,9.65168603264167,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55184068102667,3.89300087047543,8.07085833495388,18.4841065840541,0,0,0,0,0,2.34454203369928,15.9763083633668,0,22.3262690187738,0,0,0,0,0,16.4477330057155,2.48105589194647,0,3.57734797390867,0,0,0,0,11.3539033808178,0.115233987555779,0,0,0,0,4.56048747757483,2.27629969266491,0,63.6217810722301,0,0,0,1.42953088353313,0,0,0,0,0.414432328326074,1.7071847709395,23.5028285016791,3.44181887056222,0,0,4.65725755210022,4.81124423942505,0,0,15.6597604516909,2.25745537315059,9.99726984854609,0.647428837187895,0,0,10.1999308542419,0,1.98950775161368,0,0.33883824611688,0.109940516745429,0.301925687133347,10.9587304513281,13.9878118722533,0,0.980593287015622,3.29947165942276,0,0,0,0,0,0.0644578879735772,0,3.21397089490184,3.88184358887261,0.962896400270019,2.92134555298607,5.04602211744995,0,0.157771562193185,0,0,7.93540260773101,0,0,0,0,0.109265571963696,0,5.50739680606701,4.00826107898341,6.3407480679043,2.25636785363138,1.81868875723775,1.33982065078089,0,0,19.8307603167912,1.90451545170992,0.258355639344024,0.124149428591716,0.112131862580613,1.20929600728513,1.41482032270754,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| ||
|short_description=p1@OVOL1 | |short_description=p1@OVOL1 | ||
}} | }} |
Latest revision as of 10:55, 19 September 2015
Short description: | p1@OVOL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OVOL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001ofp.2_5end |
EntrezGene: | OVOL1 |
HGNC: | 8525 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.83e-19 | 42 |
epithelial cell | 6.78e-19 | 253 |
endodermal cell | 1.27e-14 | 58 |
epithelial cell of alimentary canal | 1.99e-11 | 20 |
germ line cell | 2.49e-09 | 7 |
germ cell | 2.49e-09 | 7 |
respiratory epithelial cell | 1.81e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.00e-18 | 160 |
endoderm | 4.00e-18 | 160 |
presumptive endoderm | 4.00e-18 | 160 |
digestive system | 6.70e-15 | 145 |
digestive tract | 6.70e-15 | 145 |
primitive gut | 6.70e-15 | 145 |
subdivision of digestive tract | 1.25e-12 | 118 |
orifice | 6.23e-11 | 36 |
oral opening | 3.89e-09 | 22 |
renal system | 6.01e-08 | 48 |
intestine | 8.25e-08 | 17 |
reproductive structure | 1.23e-07 | 59 |
reproductive system | 1.23e-07 | 59 |
gastrointestinal system | 1.93e-07 | 25 |
urinary system structure | 2.37e-07 | 47 |
mucosa | 3.68e-07 | 20 |
reproductive organ | 3.99e-07 | 48 |
male reproductive organ | 4.82e-07 | 11 |
mouth | 5.05e-07 | 29 |
stomodeum | 5.05e-07 | 29 |
respiratory system | 9.71e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.80e-14 | 106 |
adenocarcinoma | 5.06e-11 | 25 |
squamous cell carcinoma | 8.57e-10 | 14 |
cell type cancer | 9.22e-10 | 143 |