FFCP PHASE1:Hg19::chr11:5706411..5706429,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:5706411..5706429,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:5706411..5706429,+ | |description=CAGE_peak_at_chr11:5706411..5706429,+ | ||
|id=chr11:5706411..5706429,+ | |id=chr11:5706411..5706429,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.62e-35!42;CL:0000860!3.15e-32!45;CL:0000766!3.56e-26!76;CL:0000839!2.85e-23!70;CL:0000557!5.46e-23!71;CL:0002009!7.05e-22!65;CL:0002194!2.09e-21!63;CL:0000576!2.09e-21!63;CL:0000040!2.09e-21!63;CL:0000559!2.09e-21!63;CL:0000763!3.37e-19!112;CL:0000049!3.37e-19!112;CL:0000738!1.70e-18!140;CL:0000037!1.39e-16!172;CL:0000566!1.39e-16!172;CL:0002031!2.90e-16!124;CL:0000988!2.63e-15!182;CL:0002032!5.11e-15!165;CL:0000837!5.11e-15!165;CL:0002087!1.44e-14!119;CL:0000134!1.61e-07!358;CL:0002320!5.84e-07!365 | |ontology_enrichment_celltype=CL:0002057!1.62e-35!42;CL:0000860!3.15e-32!45;CL:0000766!3.56e-26!76;CL:0000839!2.85e-23!70;CL:0000557!5.46e-23!71;CL:0002009!7.05e-22!65;CL:0002194!2.09e-21!63;CL:0000576!2.09e-21!63;CL:0000040!2.09e-21!63;CL:0000559!2.09e-21!63;CL:0000763!3.37e-19!112;CL:0000049!3.37e-19!112;CL:0000738!1.70e-18!140;CL:0000037!1.39e-16!172;CL:0000566!1.39e-16!172;CL:0002031!2.90e-16!124;CL:0000988!2.63e-15!182;CL:0002032!5.11e-15!165;CL:0000837!5.11e-15!165;CL:0002087!1.44e-14!119;CL:0000134!1.61e-07!358;CL:0002320!5.84e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.13e-93;33!CL:0002057;4.13e-93;33!CL:0000473;2.74e-66;39!CL:0000234;2.74e-66;39!CL:0000576;1.77e-43;48!CL:0000766;6.04e-24;69!CL:0000763;7.37e-15;100!CL:0002087;4.11e-13;104!CL:0000738;8.90e-08;136!CL:0000037;9.94e-08;1!CL:0001024;9.94e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.09e-88,42;CL:0002057,8.09e-88,42;CL:0000473,2.62e-76,48;CL:0000234,2.62e-76,48;CL:0002009,2.65e-63,61;CL:0002194,3.48e-60,59;CL:0000576,3.48e-60,59;CL:0000040,3.48e-60,59;CL:0000559,3.48e-60,59;CL:0000557,2.50e-57,67;CL:0000839,1.92e-53,66;CL:0000766,5.64e-53,72;CL:0000763,4.72e-37,108;CL:0000049,4.72e-37,108;CL:0002031,3.04e-30,120;CL:0002087,5.32e-29,115;CL:0000738,1.56e-28,136;CL:0000037,3.18e-24,168;CL:0002032,2.09e-23,161;CL:0000837,2.09e-23,161;CL:0000988,9.32e-23,177;CL:0000134,5.92e-09,354;CL:0002320,1.10e-08,361;CL:0000219,9.96e-08,386;CL:0001024,1.14e-07,1;CL:0000034,5.63e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.18e-62;42!CL:0000049;7.86e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.63e-21!80;UBERON:0002390!1.23e-19!102;UBERON:0003061!1.23e-19!102;UBERON:0001474!8.44e-19!86;UBERON:0002193!3.55e-18!112;UBERON:0002405!4.99e-17!115;UBERON:0004765!9.75e-15!101;UBERON:0001434!9.75e-15!101;UBERON:0003081!1.85e-11!216;UBERON:0002204!1.03e-09!167;UBERON:0002384!3.53e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!2.63e-21!80;UBERON:0002390!1.23e-19!102;UBERON:0003061!1.23e-19!102;UBERON:0001474!8.44e-19!86;UBERON:0002193!3.55e-18!112;UBERON:0002405!4.99e-17!115;UBERON:0004765!9.75e-15!101;UBERON:0001434!9.75e-15!101;UBERON:0003081!1.85e-11!216;UBERON:0002204!1.03e-09!167;UBERON:0002384!3.53e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.45e-54,76;UBERON:0001474,4.41e-50,82;UBERON:0004765,2.80e-45,90;UBERON:0002405,1.09e-43,93;UBERON:0002390,2.99e-41,98;UBERON:0003061,2.99e-41,98;UBERON:0001434,2.41e-40,100;UBERON:0002193,4.80e-37,108;UBERON:0002204,2.14e-22,167;UBERON:0003081,2.78e-19,203;UBERON:0000926,1.05e-10,315;UBERON:0004120,1.05e-10,315;UBERON:0006603,1.05e-10,315;UBERON:0002384,2.59e-08,371 | |||
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| ||
|short_description=p@chr11:5706411..5706429,+ | |short_description=p@chr11:5706411..5706429,+ | ||
}} | }} |
Latest revision as of 22:53, 23 July 2015
Short description: | p@chr11:5706411..5706429, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:5706411..5706429, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.09e-88 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.09e-88 | 42 |
defensive cell | 2.62e-76 | 48 |
phagocyte | 2.62e-76 | 48 |
macrophage dendritic cell progenitor | 2.65e-63 | 61 |
monopoietic cell | 3.48e-60 | 59 |
monocyte | 3.48e-60 | 59 |
monoblast | 3.48e-60 | 59 |
promonocyte | 3.48e-60 | 59 |
granulocyte monocyte progenitor cell | 2.50e-57 | 67 |
myeloid lineage restricted progenitor cell | 1.92e-53 | 66 |
myeloid leukocyte | 5.64e-53 | 72 |
myeloid cell | 4.72e-37 | 108 |
common myeloid progenitor | 4.72e-37 | 108 |
hematopoietic lineage restricted progenitor cell | 3.04e-30 | 120 |
nongranular leukocyte | 5.32e-29 | 115 |
leukocyte | 1.56e-28 | 136 |
hematopoietic stem cell | 3.18e-24 | 168 |
hematopoietic oligopotent progenitor cell | 2.09e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-23 | 161 |
hematopoietic cell | 9.32e-23 | 177 |
mesenchymal cell | 5.92e-09 | 354 |
connective tissue cell | 1.10e-08 | 361 |
motile cell | 9.96e-08 | 386 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.14e-07 | 1 |
stem cell | 5.63e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.45e-54 | 76 |
bone element | 4.41e-50 | 82 |
skeletal element | 2.80e-45 | 90 |
immune system | 1.09e-43 | 93 |
hematopoietic system | 2.99e-41 | 98 |
blood island | 2.99e-41 | 98 |
skeletal system | 2.41e-40 | 100 |
hemolymphoid system | 4.80e-37 | 108 |
musculoskeletal system | 2.14e-22 | 167 |
lateral plate mesoderm | 2.78e-19 | 203 |
mesoderm | 1.05e-10 | 315 |
mesoderm-derived structure | 1.05e-10 | 315 |
presumptive mesoderm | 1.05e-10 | 315 |
connective tissue | 2.59e-08 | 371 |