FFCP PHASE1:Hg19::chr11:18270308..18270324,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6289,100528017 | |EntrezGene=6289,100528017 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10514,39550 | |HGNC=10514,39550 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAK9,P02735 | |UniProt=G3XAK9,P02735 | ||
|association_with_transcript=-87bp_to_NM_001127380,NM_001199744,NM_030754_5end | |association_with_transcript=-87bp_to_NM_001127380,NM_001199744,NM_030754_5end | ||
|cluster_id=chr11:18270308..18270324,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_SAA2-SAA4_5end,CAGE_peak_3_at_SAA2_5end | |description=CAGE_peak_2_at_SAA2-SAA4_5end,CAGE_peak_3_at_SAA2_5end | ||
|id=chr11:18270308..18270324,- | |id=chr11:18270308..18270324,- | ||
|ontology_enrichment_celltype=CL:0000136!4.20e-12!15;CL:0000181!3.67e-09!12;CL:0000417!3.67e-09!12;CL:0000668!3.67e-09!12;CL:0000414!3.67e-09!12;CL:0000412!3.67e-09!12;CL:0000182!3.67e-09!12;CL:0002617!8.52e-07!2 | |ontology_enrichment_celltype=CL:0000136!4.20e-12!15;CL:0000181!3.67e-09!12;CL:0000417!3.67e-09!12;CL:0000668!3.67e-09!12;CL:0000414!3.67e-09!12;CL:0000412!3.67e-09!12;CL:0000182!3.67e-09!12;CL:0002617!8.52e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.47e-25;12!CL:0000047;1.17e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.53e-25,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006122!1.40e-12!1;UBERON:0005418!1.57e-12!1;UBERON:0001389!1.57e-12!1;UBERON:0000026!1.57e-12!1;UBERON:0008784!1.57e-12!1;UBERON:0006058!1.57e-12!1;UBERON:0003663!1.57e-12!1;UBERON:0001383!1.57e-12!1;UBERON:0004256!1.57e-12!1;UBERON:0002529!1.57e-12!1;UBERON:0004708!1.57e-12!1;UBERON:0002101!1.57e-12!1;UBERON:0004709!1.57e-12!1;UBERON:0003661!1.57e-12!1;UBERON:0002471!1.57e-12!1;UBERON:0004357!1.57e-12!1;UBERON:0009872!1.57e-12!1;UBERON:0004347!1.57e-12!1;UBERON:0005420!1.57e-12!1;UBERON:0005732!1.57e-12!1;UBERON:0006057!1.57e-12!1;UBERON:0000978!1.57e-12!1;UBERON:0002103!1.57e-12!1;UBERON:0001665!1.57e-12!1;UBERON:0003823!1.57e-12!1;UBERON:0000154!1.57e-12!1;UBERON:0005733!1.57e-12!1;UBERON:0005730!1.57e-12!1;UBERON:0000997!3.85e-12!1;UBERON:0005056!3.85e-12!1;UBERON:0002107!7.21e-10!19;UBERON:0006925!7.21e-10!19;UBERON:0008836!7.21e-10!19;UBERON:0008835!1.51e-08!22;UBERON:0003894!1.51e-08!22;UBERON:0009854!3.51e-08!23;UBERON:0007499!1.54e-07!25;UBERON:0009497!1.54e-07!25;UBERON:0000015!1.54e-07!25;UBERON:0002423!1.54e-07!25;UBERON:0006235!1.54e-07!25;UBERON:0004161!1.54e-07!25;UBERON:0005057!2.97e-07!26;UBERON:0009856!2.97e-07!26;UBERON:0005172!5.90e-07!55;UBERON:0005173!5.90e-07!55;UBERON:0002950!6.42e-07!2;UBERON:0001891!6.42e-07!2;UBERON:0009616!6.42e-07!2;UBERON:0001630!6.80e-07!2;UBERON:0005090!6.80e-07!2;UBERON:0009569!7.74e-07!113 | |ontology_enrichment_uberon=UBERON:0006122!1.40e-12!1;UBERON:0005418!1.57e-12!1;UBERON:0001389!1.57e-12!1;UBERON:0000026!1.57e-12!1;UBERON:0008784!1.57e-12!1;UBERON:0006058!1.57e-12!1;UBERON:0003663!1.57e-12!1;UBERON:0001383!1.57e-12!1;UBERON:0004256!1.57e-12!1;UBERON:0002529!1.57e-12!1;UBERON:0004708!1.57e-12!1;UBERON:0002101!1.57e-12!1;UBERON:0004709!1.57e-12!1;UBERON:0003661!1.57e-12!1;UBERON:0002471!1.57e-12!1;UBERON:0004357!1.57e-12!1;UBERON:0009872!1.57e-12!1;UBERON:0004347!1.57e-12!1;UBERON:0005420!1.57e-12!1;UBERON:0005732!1.57e-12!1;UBERON:0006057!1.57e-12!1;UBERON:0000978!1.57e-12!1;UBERON:0002103!1.57e-12!1;UBERON:0001665!1.57e-12!1;UBERON:0003823!1.57e-12!1;UBERON:0000154!1.57e-12!1;UBERON:0005733!1.57e-12!1;UBERON:0005730!1.57e-12!1;UBERON:0000997!3.85e-12!1;UBERON:0005056!3.85e-12!1;UBERON:0002107!7.21e-10!19;UBERON:0006925!7.21e-10!19;UBERON:0008836!7.21e-10!19;UBERON:0008835!1.51e-08!22;UBERON:0003894!1.51e-08!22;UBERON:0009854!3.51e-08!23;UBERON:0007499!1.54e-07!25;UBERON:0009497!1.54e-07!25;UBERON:0000015!1.54e-07!25;UBERON:0002423!1.54e-07!25;UBERON:0006235!1.54e-07!25;UBERON:0004161!1.54e-07!25;UBERON:0005057!2.97e-07!26;UBERON:0009856!2.97e-07!26;UBERON:0005172!5.90e-07!55;UBERON:0005173!5.90e-07!55;UBERON:0002950!6.42e-07!2;UBERON:0001891!6.42e-07!2;UBERON:0009616!6.42e-07!2;UBERON:0001630!6.80e-07!2;UBERON:0005090!6.80e-07!2;UBERON:0009569!7.74e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-28;19!UBERON:0006925;2.32e-28;19!UBERON:0002423;9.78e-22;25!UBERON:0002365;3.13e-18;31!UBERON:0002330;3.13e-18;31!UBERON:0002368;1.08e-14;33!UBERON:0000949;2.47e-12;43!UBERON:0005172;4.23e-09;52!UBERON:0005173;4.23e-09;52!UBERON:0002530;7.19e-07;57!UBERON:0001007;9.87e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-28,19;UBERON:0006925,2.32e-28,19;UBERON:0008836,2.32e-28,19;UBERON:0008835,1.34e-24,22;UBERON:0003894,1.34e-24,22;UBERON:0009854,1.46e-23,23;UBERON:0007499,9.78e-22,25;UBERON:0009497,9.78e-22,25;UBERON:0000015,9.78e-22,25;UBERON:0002423,9.78e-22,25;UBERON:0006235,9.78e-22,25;UBERON:0004161,9.78e-22,25;UBERON:0009856,6.29e-21,26;UBERON:0002365,1.15e-17,31;UBERON:0002330,1.15e-17,31;UBERON:0002368,1.01e-15,35;UBERON:0000949,2.30e-12,45;UBERON:0003929,2.12e-10,54;UBERON:0005172,2.12e-10,54;UBERON:0005173,2.12e-10,54;UBERON:0002530,1.45e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0005911,5.11e-07,82 | |||
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|short_description=p2@SAA2-SAA4,p3@SAA2 | |short_description=p2@SAA2-SAA4,p3@SAA2 | ||
}} | }} |
Latest revision as of 02:15, 17 September 2015
Short description: | p2@SAA2-SAA4, p3@SAA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SAA2-SAA4_5end, CAGE_peak_3_at_SAA2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -87bp_to_NM_001127380, NM_001199744, NM_030754_5end |
EntrezGene: | 6289,100528017 |
HGNC: | 39550&submit=Submit 10514, 39550 |
UniProt: | G3XAK9P02735 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.53e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-28 | 19 |
digestive gland | 2.32e-28 | 19 |
liver bud | 2.32e-28 | 19 |
hepatic diverticulum | 1.34e-24 | 22 |
liver primordium | 1.34e-24 | 22 |
digestive tract diverticulum | 1.46e-23 | 23 |
epithelial sac | 9.78e-22 | 25 |
epithelium of foregut-midgut junction | 9.78e-22 | 25 |
anatomical boundary | 9.78e-22 | 25 |
hepatobiliary system | 9.78e-22 | 25 |
foregut-midgut junction | 9.78e-22 | 25 |
septum transversum | 9.78e-22 | 25 |
sac | 6.29e-21 | 26 |
exocrine gland | 1.15e-17 | 31 |
exocrine system | 1.15e-17 | 31 |
endocrine gland | 1.01e-15 | 35 |
endocrine system | 2.30e-12 | 45 |
gut epithelium | 2.12e-10 | 54 |
abdomen element | 2.12e-10 | 54 |
abdominal segment element | 2.12e-10 | 54 |
gland | 1.45e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
endo-epithelium | 5.11e-07 | 82 |