FFCP PHASE1:Hg19::chr16:82029551..82029560,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:82029551..82029560,+
|short_description=p@chr16:82029551..82029560,+
|description=CAGE_peak_at_chr16:82029551..82029560,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:82029551..82029560,+ | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_at_chr16:82029551..82029560,+ | |||
|id=chr16:82029551..82029560,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.02e-77!24;CL:0000115!7.28e-58!35;CL:0000071!1.96e-53!18;CL:0002546!1.96e-53!18;CL:0002078!3.28e-45!44;CL:0000213!5.56e-34!57;CL:0000215!5.56e-34!57;CL:0000222!5.10e-31!119;CL:0005020!3.49e-25!6;CL:0002138!3.49e-25!6;CL:0005022!3.49e-25!6;CL:0002543!7.00e-25!6;CL:0002618!7.60e-19!3;CL:0002144!2.83e-18!3;CL:1000413!1.11e-16!9;CL:0000076!1.15e-13!62;CL:0000220!2.99e-13!246;CL:0002321!4.23e-13!248;CL:0002544!1.08e-09!6;CL:0000192!1.26e-07!42;CL:0000514!1.26e-07!42;CL:0000066!7.99e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.67e-40;24!CL:0000115;3.15e-36;36!CL:0002138;9.21e-31;6!CL:0002078;3.17e-25;45!CL:0000071;7.06e-18;18!CL:0000213;8.03e-16;58!CL:0000215;8.03e-16;58!CL:0002544;4.53e-14;6!CL:0002262;3.70e-11;2!CL:0002545;3.70e-11;2!CL:1000398;3.70e-11;2!CL:1000413;1.05e-09;9!CL:0002144;5.73e-08;3!CL:0002618;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.62e-44,36;CL:0002139,4.50e-40,24;CL:0002078,3.77e-35,45;CL:0005020,9.21e-31,6;CL:0002138,9.21e-31,6;CL:0005022,9.21e-31,6;CL:0000213,3.18e-27,58;CL:0000215,3.18e-27,58;CL:0000071,8.24e-18,18;CL:0002546,8.24e-18,18;CL:0002544,5.17e-14,6;CL:0000222,7.18e-13,121;CL:0002262,3.35e-11,2;CL:1000398,3.35e-11,2;CL:0002545,3.70e-11,2;CL:1000413,1.15e-09,9;CL:0002144,5.93e-08,3;CL:0002618,7.76e-08,3 | |||
|ontology_enrichment_development_v019=CL:0005022;9.21e-31;6!UBERON:0003124;6.31e-21;1!CL:0002546;7.06e-18;18!CL:0000222;1.41e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.96e-53!18;UBERON:0004638!1.96e-53!18;UBERON:0004852!1.96e-53!18;UBERON:0000055!6.75e-49!69;UBERON:0000487!2.98e-43!22;UBERON:0002049!4.50e-42!79;UBERON:0007798!4.50e-42!79;UBERON:0006914!9.44e-38!25;UBERON:0001981!2.69e-35!60;UBERON:0007500!2.69e-35!60;UBERON:0004537!2.69e-35!60;UBERON:0006965!2.69e-35!60;UBERON:0004535!8.57e-29!110;UBERON:0001009!6.79e-28!113;UBERON:0004872!8.74e-27!84;UBERON:0001473!7.51e-19!8;UBERON:0004536!7.51e-19!8;UBERON:0006558!7.51e-19!8;UBERON:0001915!2.83e-18!3;UBERON:0001982!2.83e-18!3;UBERON:0000490!7.91e-18!138;UBERON:0003914!8.40e-18!118;UBERON:0003915!1.11e-16!9;UBERON:0004700!1.11e-16!9;UBERON:0001917!1.11e-16!9;UBERON:0001638!1.55e-16!9;UBERON:0003920!1.55e-16!9;UBERON:0004582!1.55e-16!9;UBERON:0002465!4.83e-15!10;UBERON:0001637!5.74e-15!42;UBERON:0003509!5.74e-15!42;UBERON:0004572!5.74e-15!42;UBERON:0004111!7.85e-14!241;UBERON:0004573!5.30e-13!33;UBERON:0004571!5.30e-13!33;UBERON:0002066!1.61e-11!5;UBERON:0000477!8.66e-11!286;UBERON:0000025!4.81e-09!194;UBERON:0003081!1.06e-08!216;UBERON:0003513!2.78e-07!8;UBERON:0000947!6.11e-07!21;UBERON:0010191!6.11e-07!21;UBERON:0000483!7.73e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;2.81e-23;8!UBERON:0004536;2.81e-23;8!UBERON:0006558;2.81e-23;8!UBERON:0002465;8.92e-19;10!UBERON:0004638;7.06e-18;18!UBERON:0001986;7.06e-18;18!UBERON:0004852;7.06e-18;18!UBERON:0000487;1.04e-14;22!UBERON:0000055;4.96e-14;65!UBERON:0006914;5.42e-13;25!UBERON:0001281;3.70e-11;2!UBERON:0003497;3.70e-11;2!UBERON:0003909;3.70e-11;2!UBERON:0005800;3.70e-11;2!UBERON:0003835;3.70e-11;2!UBERON:0001515;3.70e-11;2!UBERON:0003915;1.05e-09;9!UBERON:0004700;1.05e-09;9!UBERON:0001917;1.05e-09;9!UBERON:0000490;1.03e-08;33!UBERON:0002049;2.17e-08;75!UBERON:0007798;2.17e-08;75!UBERON:0010523;5.73e-08;3!UBERON:0001915;5.73e-08;3!UBERON:0001982;5.73e-08;3!UBERON:0001280;7.26e-08;3!UBERON:0004647;7.26e-08;3!UBERON:0002405;2.38e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,2.81e-23,8;UBERON:0004536,2.81e-23,8;UBERON:0006558,2.81e-23,8;UBERON:0002465,8.92e-19,10;UBERON:0000055,2.62e-18,68;UBERON:0004638,8.24e-18,18;UBERON:0001986,8.24e-18,18;UBERON:0004852,8.24e-18,18;UBERON:0002049,6.32e-16,78;UBERON:0007798,6.32e-16,78;UBERON:0000487,1.18e-14,22;UBERON:0006914,6.05e-13,25;UBERON:0004535,2.67e-11,109;UBERON:0001281,3.35e-11,2;UBERON:0003497,3.35e-11,2;UBERON:0003909,3.35e-11,2;UBERON:0003835,3.35e-11,2;UBERON:0005800,3.70e-11,2;UBERON:0001515,3.70e-11,2;UBERON:0001009,5.50e-11,112;UBERON:0003915,1.15e-09,9;UBERON:0004700,1.15e-09,9;UBERON:0001917,1.15e-09,9;UBERON:0004872,1.86e-08,83;UBERON:0007500,1.87e-08,59;UBERON:0001981,1.87e-08,59;UBERON:0004537,1.87e-08,59;UBERON:0006965,1.87e-08,59;UBERON:0010523,5.93e-08,3;UBERON:0001915,5.93e-08,3;UBERON:0001982,5.93e-08,3;UBERON:0001280,6.78e-08,3;UBERON:0004647,6.78e-08,3;UBERON:0005171,6.78e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596287222100115,0,1.04142150482278,0,0.838998872419812,0,0.626984899610432,7.75250277507987,8.53839030448104,6.35969164252873,0.402829317109147,5.32190474002959,0.24406205754817,1.10298924103761,0,1.07159673940896,0.673588117878509,0.675668882899933,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95327968467805,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0.308033580176089,0,0,0.55597265731176,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596287222100115,0,1.04142150482278,0,0.838998872419812,0,0.626984899610432,7.75250277507987,8.53839030448104,6.35969164252873,0.402829317109147,5.32190474002959,0.24406205754817,1.10298924103761,0,1.07159673940896,0.673588117878509,0.675668882899933,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95327968467805,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0.308033580176089,0,0,0.55597265731176,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr16:82029551..82029560,+ | |||
}} | }} |
Latest revision as of 12:45, 25 July 2015
Short description: | p@chr16:82029551..82029560, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:82029551..82029560, + |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.62e-44 | 36 |
endothelial cell of vascular tree | 4.50e-40 | 24 |
meso-epithelial cell | 3.77e-35 | 45 |
lymphangioblast | 9.21e-31 | 6 |
endothelial cell of lymphatic vessel | 9.21e-31 | 6 |
vascular lymphangioblast | 9.21e-31 | 6 |
lining cell | 3.18e-27 | 58 |
barrier cell | 3.18e-27 | 58 |
blood vessel endothelial cell | 8.24e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.24e-18 | 18 |
aortic endothelial cell | 5.17e-14 | 6 |
mesodermal cell | 7.18e-13 | 121 |
endothelial cell of sinusoid | 3.35e-11 | 2 |
endothelial cell of hepatic sinusoid | 3.35e-11 | 2 |
thoracic aorta endothelial cell | 3.70e-11 | 2 |
endothelial cell of artery | 1.15e-09 | 9 |
capillary endothelial cell | 5.93e-08 | 3 |
endothelial cell of umbilical vein | 7.76e-08 | 3 |