FFCP PHASE1:Hg19::chr10:6443408..6443412,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:6443408..6443412,- | |||
|description=CAGE_peak_at_chr10:6443408..6443412,- | |description=CAGE_peak_at_chr10:6443408..6443412,- | ||
|id=chr10:6443408..6443412,- | |id=chr10:6443408..6443412,- | ||
|ontology_enrichment_celltype=CL:0000066!1.71e-09!254;CL:0002327!5.55e-08!4 | |ontology_enrichment_celltype=CL:0000066!1.71e-09!254;CL:0002327!5.55e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000054;1.38e-09;2!CL:0002363;1.38e-09;2!CL:0000137;1.38e-09;2!CL:0000092;1.38e-09;2!CL:0000307;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.57e-09,2;CL:0000137,1.57e-09,2;CL:0000092,1.57e-09,2;CL:0002363,2.02e-09,2;CL:0000008,2.02e-09,2;CL:0000068,9.64e-07,3;CL:0000069,9.64e-07,3;CL:0000307,9.64e-07,3;CL:0000377,9.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000008;1.38e-09;2!CL:0000377;8.38e-07;3!UBERON:0009847;8.38e-07;3!UBERON:0003353;8.38e-07;3 | |||
|ontology_enrichment_disease=DOID:14566!8.14e-15!239;DOID:162!3.30e-14!235;DOID:305!2.70e-12!106;DOID:1749!6.15e-12!14;DOID:0050687!2.91e-11!143;DOID:2394!3.00e-08!14 | |ontology_enrichment_disease=DOID:14566!8.14e-15!239;DOID:162!3.30e-14!235;DOID:305!2.70e-12!106;DOID:1749!6.15e-12!14;DOID:0050687!2.91e-11!143;DOID:2394!3.00e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:0060085;8.01e-18;1!DOID:3165;8.01e-18;1!DOID:0060121;8.01e-18;1!DOID:2438;8.01e-18;1!DOID:4418;8.01e-18;1!DOID:1749;2.49e-11;14!DOID:154;8.32e-10;2!DOID:4236;8.32e-10;2!DOID:200;1.38e-09;2!DOID:4305;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.03e-17,1;DOID:3165,1.03e-17,1;DOID:0060121,1.03e-17,1;DOID:2438,1.03e-17,1;DOID:4418,1.03e-17,1;DOID:1749,2.28e-11,14;DOID:154,7.98e-10,2;DOID:4236,7.98e-10,2;DOID:200,1.57e-09,2;DOID:4305,1.57e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.15e-11!12;UBERON:0001911!5.55e-08!4;UBERON:0005333!5.55e-08!4;UBERON:0008425!5.55e-08!4;UBERON:0005311!5.55e-08!4;UBERON:0003729!2.23e-07!5;UBERON:0000992!5.02e-07!13 | |ontology_enrichment_uberon=UBERON:0000344!2.15e-11!12;UBERON:0001911!5.55e-08!4;UBERON:0005333!5.55e-08!4;UBERON:0008425!5.55e-08!4;UBERON:0005311!5.55e-08!4;UBERON:0003729!2.23e-07!5;UBERON:0000992!5.02e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0003566;1.38e-09;2!UBERON:0001777;1.38e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,2.02e-09,2;UBERON:0001777,2.02e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0,0.257640540045629,0,0.675105328965065,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.985143749731331,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.192444225451024,0,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.437299999980979,0,2.16207551742449,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0.19351266257817,0,0.0821154570532092,0,0,0,0.548167698587004,1.19228767021794,0,0,0,0,0.19980960958213,0.432271251462318,0.114536596165916,0.171594997861965,0.288109595976299,0,0.235694034616795,0.951329442515298,1.35983700206033,0.305994652908965,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0.211200673038813,0.179287339332845,0,0,0,0.5085370753095,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.276697269872462,0.499921631848426,0.606596470166591,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0.310874401165561,0,0.159296767163702,0,0.465788870628778,0,0.265841714557995,0,0.300515217994437,0.380805212168795,1.62748293281865,0.363697318405119,0.322231671127465,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0.337884881306145,1.53744911152768,0.345430341731199,0,0,0,0,0,2.29326894192489,0.491545817507439,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0.0981477185010256,0.353909170043221,0.917142992608395,0.115525666150338,0,0,0,0,0,0,0,0.49131575253029,0.147856086217045,0,0,0,0,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,1.06374456795571,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.380095503034311,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0.0673520530145875,0,0,0.244209805832924,0,0,0.538951212639521,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0,0.257640540045629,0,0.675105328965065,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.985143749731331,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.192444225451024,0,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.437299999980979,0,2.16207551742449,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0.19351266257817,0,0.0821154570532092,0,0,0,0.548167698587004,1.19228767021794,0,0,0,0,0.19980960958213,0.432271251462318,0.114536596165916,0.171594997861965,0.288109595976299,0,0.235694034616795,0.951329442515298,1.35983700206033,0.305994652908965,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0.211200673038813,0.179287339332845,0,0,0,0.5085370753095,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.276697269872462,0.499921631848426,0.606596470166591,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0.310874401165561,0,0.159296767163702,0,0.465788870628778,0,0.265841714557995,0,0.300515217994437,0.380805212168795,1.62748293281865,0.363697318405119,0.322231671127465,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0.337884881306145,1.53744911152768,0.345430341731199,0,0,0,0,0,2.29326894192489,0.491545817507439,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0.0981477185010256,0.353909170043221,0.917142992608395,0.115525666150338,0,0,0,0,0,0,0,0.49131575253029,0.147856086217045,0,0,0,0,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,1.06374456795571,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.380095503034311,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0.0673520530145875,0,0,0.244209805832924,0,0,0.538951212639521,0,0,0,0,0,0 | ||
|short_description=p@chr10:6443408..6443412,- | |short_description=p@chr10:6443408..6443412,- | ||
}} | }} |
Latest revision as of 14:42, 23 July 2015
Short description: | p@chr10:6443408..6443412, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:6443408..6443412, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.57e-09 | 2 |
osteocyte | 1.57e-09 | 2 |
osteoclast | 1.57e-09 | 2 |
keratocyte | 2.02e-09 | 2 |
migratory cranial neural crest cell | 2.02e-09 | 2 |
duct epithelial cell | 9.64e-07 | 3 |
branched duct epithelial cell | 9.64e-07 | 3 |
tracheal epithelial cell | 9.64e-07 | 3 |
tracheoblast | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 2.02e-09 | 2 |
substantia propria of cornea | 2.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.03e-17 | 1 |
skin benign neoplasm | 1.03e-17 | 1 |
integumentary system benign neoplasm | 1.03e-17 | 1 |
dermis tumor | 1.03e-17 | 1 |
cutaneous fibrous histiocytoma | 1.03e-17 | 1 |
squamous cell carcinoma | 2.28e-11 | 14 |
mixed cell type cancer | 7.98e-10 | 2 |
carcinosarcoma | 7.98e-10 | 2 |
giant cell tumor | 1.57e-09 | 2 |
bone giant cell tumor | 1.57e-09 | 2 |