FFCP PHASE1:Hg19::chr16:70838983..70838988,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:70838983..70838988,-
|short_description=p@chr16:70838983..70838988,-
|description=CAGE_peak_at_chr16:70838983..70838988,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:70838983..70838988,- | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr16:70838983..70838988,- | |||
|id=chr16:70838983..70838988,- | |||
|ontology_enrichment_celltype=CL:0002368!2.97e-11!13;CL:0002076!3.38e-11!43;CL:0002202!1.04e-09!9;CL:0002632!1.04e-09!9;CL:0000548!6.43e-08!679;CL:0000004!6.43e-08!679;CL:0000255!6.43e-08!679;CL:0000223!7.79e-08!59;CL:0000012!1.22e-07!682;CL:0000066!2.03e-07!254;CL:0000082!6.56e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.80e-21;13!CL:0002202;6.15e-18;9!CL:0002632;6.15e-18;9!CL:0000307;8.60e-15;3!CL:0002328;3.54e-14;3!CL:0002076;1.79e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.09e-21,13;CL:0002202,3.21e-18,9;CL:0002632,3.21e-18,9;CL:0000068,7.89e-15,3;CL:0000069,7.89e-15,3;CL:0000307,7.89e-15,3;CL:0000377,7.89e-15,3;CL:0002328,1.44e-14,3;CL:0002076,5.32e-13,42;CL:0000223,9.69e-09,58 | |||
|ontology_enrichment_development_v019=CL:0000377;8.60e-15;3 | |||
|ontology_enrichment_disease=DOID:14566!2.22e-26!239;DOID:162!3.51e-26!235;DOID:0050686!5.86e-20!137;DOID:0050687!1.39e-10!143;DOID:305!4.43e-09!106;DOID:0060058!1.75e-08!10;DOID:2531!2.72e-08!51;DOID:0060083!2.72e-08!51;DOID:193!6.17e-08!29;DOID:120!9.40e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.60e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.90e-09,8;DOID:162,5.53e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004802!6.56e-07!19;UBERON:0000115!6.56e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.54e-14;3!UBERON:0002031;3.54e-14;3!UBERON:0007196;1.64e-10;15!UBERON:0001558;1.64e-10;15!UBERON:0000485;1.97e-10;7!UBERON:0002185;1.08e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.44e-14,3;UBERON:0002031,1.44e-14,3;UBERON:0007196,1.13e-10,15;UBERON:0001558,1.13e-10,15;UBERON:0002185,6.36e-09,5;UBERON:0000485,2.60e-08,9 | |||
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| ||
|short_description=p@chr16:70838983..70838988,- | |||
}} | }} |
Latest revision as of 12:02, 25 July 2015
Short description: | p@chr16:70838983..70838988, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:70838983..70838988, - |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.09e-21 | 13 |
epithelial cell of tracheobronchial tree | 3.21e-18 | 9 |
epithelial cell of lower respiratory tract | 3.21e-18 | 9 |
duct epithelial cell | 7.89e-15 | 3 |
branched duct epithelial cell | 7.89e-15 | 3 |
tracheal epithelial cell | 7.89e-15 | 3 |
tracheoblast | 7.89e-15 | 3 |
bronchial epithelial cell | 1.44e-14 | 3 |
endo-epithelial cell | 5.32e-13 | 42 |
endodermal cell | 9.69e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.44e-14 | 3 |
epithelium of bronchus | 1.44e-14 | 3 |
tracheobronchial tree | 1.13e-10 | 15 |
lower respiratory tract | 1.13e-10 | 15 |
bronchus | 6.36e-09 | 5 |
simple columnar epithelium | 2.60e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.90e-09 | 8 |
cancer | 5.53e-07 | 235 |