FFCP PHASE1:Hg19::chr8:101725008..101725030,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26986 | |EntrezGene=26986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8554 | |HGNC=8554 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000517403_5end | |association_with_transcript=-19bp_to_ENST00000517403_5end | ||
|cluster_id=chr8:101725008..101725030,- | |||
|coexpression_cluster_id=C306 | |||
|description=CAGE_peak_16_at_PABPC1_5end | |description=CAGE_peak_16_at_PABPC1_5end | ||
|id=chr8:101725008..101725030,- | |id=chr8:101725008..101725030,- | ||
|ontology_enrichment_celltype=CL:0000037!7.07e-22!172;CL:0000566!7.07e-22!172;CL:0000738!1.33e-19!140;CL:0002032!2.15e-19!165;CL:0000837!2.15e-19!165;CL:0000988!2.97e-18!182;CL:0002087!6.14e-17!119;CL:0002031!1.22e-14!124;CL:0000763!1.75e-12!112;CL:0000049!1.75e-12!112;CL:0000766!1.84e-11!76;CL:0002057!1.77e-10!42;CL:0000860!2.82e-10!45;CL:0002194!3.00e-09!63;CL:0000576!3.00e-09!63;CL:0000040!3.00e-09!63;CL:0000559!3.00e-09!63;CL:0000839!4.61e-09!70;CL:0002009!7.20e-09!65;CL:0000557!9.80e-09!71;CL:0000063!4.56e-08!578;CL:0000542!4.56e-07!53;CL:0000051!4.56e-07!53 | |ontology_enrichment_celltype=CL:0000037!7.07e-22!172;CL:0000566!7.07e-22!172;CL:0000738!1.33e-19!140;CL:0002032!2.15e-19!165;CL:0000837!2.15e-19!165;CL:0000988!2.97e-18!182;CL:0002087!6.14e-17!119;CL:0002031!1.22e-14!124;CL:0000763!1.75e-12!112;CL:0000049!1.75e-12!112;CL:0000766!1.84e-11!76;CL:0002057!1.77e-10!42;CL:0000860!2.82e-10!45;CL:0002194!3.00e-09!63;CL:0000576!3.00e-09!63;CL:0000040!3.00e-09!63;CL:0000559!3.00e-09!63;CL:0000839!4.61e-09!70;CL:0002009!7.20e-09!65;CL:0000557!9.80e-09!71;CL:0000063!4.56e-08!578;CL:0000542!4.56e-07!53;CL:0000051!4.56e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.74e-09;33!CL:0002057;5.74e-09;33!CL:0000576;1.48e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.48e-19,168;CL:0000738,2.21e-17,136;CL:0000988,9.25e-17,177;CL:0002032,1.44e-16,161;CL:0000837,1.44e-16,161;CL:0002087,2.87e-16,115;CL:0002031,2.92e-12,120;CL:0000860,6.39e-12,42;CL:0002057,6.39e-12,42;CL:0000473,3.72e-10,48;CL:0000234,3.72e-10,48;CL:0000763,1.13e-09,108;CL:0000049,1.13e-09,108;CL:0000766,2.45e-09,72;CL:0002194,8.04e-08,59;CL:0000576,8.04e-08,59;CL:0000040,8.04e-08,59;CL:0000559,8.04e-08,59;CL:0000542,2.18e-07,53;CL:0000051,2.18e-07,53;CL:0002009,2.67e-07,61;CL:0000839,7.50e-07,66;CL:0000838,7.72e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;3.52e-09;42 | |||
|ontology_enrichment_disease=DOID:162!7.91e-23!235;DOID:14566!1.24e-22!239;DOID:0050687!5.22e-16!143;DOID:305!1.23e-11!106;DOID:0050686!1.63e-10!137;DOID:2531!3.18e-08!51;DOID:0060083!3.18e-08!51 | |ontology_enrichment_disease=DOID:162!7.91e-23!235;DOID:14566!1.24e-22!239;DOID:0050687!5.22e-16!143;DOID:305!1.23e-11!106;DOID:0050686!1.63e-10!137;DOID:2531!3.18e-08!51;DOID:0060083!3.18e-08!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.91e-13,235;DOID:14566,8.03e-13,239;DOID:0050687,7.71e-09,143;DOID:0050686,4.39e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.35e-07!80;UBERON:0001474!5.77e-07!86 | |ontology_enrichment_uberon=UBERON:0002371!5.35e-07!80;UBERON:0001474!5.77e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p16@PABPC1 | |short_description=p16@PABPC1 | ||
}} | }} |
Latest revision as of 20:08, 24 September 2015
Short description: | p16@PABPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PABPC1_5end |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | -19bp_to_ENST00000517403_5end |
EntrezGene: | PABPC1 |
HGNC: | 8554 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.48e-19 | 168 |
leukocyte | 2.21e-17 | 136 |
hematopoietic cell | 9.25e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.44e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-16 | 161 |
nongranular leukocyte | 2.87e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 2.92e-12 | 120 |
classical monocyte | 6.39e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.39e-12 | 42 |
defensive cell | 3.72e-10 | 48 |
phagocyte | 3.72e-10 | 48 |
myeloid cell | 1.13e-09 | 108 |
common myeloid progenitor | 1.13e-09 | 108 |
myeloid leukocyte | 2.45e-09 | 72 |
monopoietic cell | 8.04e-08 | 59 |
monocyte | 8.04e-08 | 59 |
monoblast | 8.04e-08 | 59 |
promonocyte | 8.04e-08 | 59 |
lymphocyte | 2.18e-07 | 53 |
common lymphoid progenitor | 2.18e-07 | 53 |
macrophage dendritic cell progenitor | 2.67e-07 | 61 |
myeloid lineage restricted progenitor cell | 7.50e-07 | 66 |
lymphoid lineage restricted progenitor cell | 7.72e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.91e-13 | 235 |
disease of cellular proliferation | 8.03e-13 | 239 |
cell type cancer | 7.71e-09 | 143 |
organ system cancer | 4.39e-07 | 137 |