FFCP PHASE1:Hg19::chr7:91875181..91875260,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=889 | |EntrezGene=889 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1573 | |HGNC=1573 | ||
|TSSclassifier=strong | |||
|UniProt=A6NNU0,O00522,C9J3W7,C9JI47,C9JD43,C9JSG7,C9JBN7,C9JF32,C9JEW7,C9JJM9,C9J718,C9JD81,A4D1F7 | |UniProt=A6NNU0,O00522,C9J3W7,C9JI47,C9JD43,C9JSG7,C9JBN7,C9JF32,C9JEW7,C9JJM9,C9J718,C9JD81,A4D1F7 | ||
|association_with_transcript=0bp_to_ENST00000394503,ENST00000394505,ENST00000413688,ENST00000422347,ENST00000425073,ENST00000425919,ENST00000430102,ENST00000433016,ENST00000440209,ENST00000452773,ENST00000454017,ENST00000458493,ENST00000466166,ENST00000489087,NM_001013406,NM_004912,NM_194454,uc003ulr.1,uc003uls.1,uc003ult.1_5end | |association_with_transcript=0bp_to_ENST00000394503,ENST00000394505,ENST00000413688,ENST00000422347,ENST00000425073,ENST00000425919,ENST00000430102,ENST00000433016,ENST00000440209,ENST00000452773,ENST00000454017,ENST00000458493,ENST00000466166,ENST00000489087,NM_001013406,NM_004912,NM_194454,uc003ulr.1,uc003uls.1,uc003ult.1_5end | ||
|cluster_id=chr7:91875181..91875260,- | |||
|description=CAGE_peak_1_at_KRIT1_5end | |description=CAGE_peak_1_at_KRIT1_5end | ||
|id=chr7:91875181..91875260,- | |id=chr7:91875181..91875260,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.07e-08;82 | |||
|ontology_enrichment_disease=DOID:162!9.67e-07!235 | |ontology_enrichment_disease=DOID:162!9.67e-07!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.76e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.70e-35!115;UBERON:0001049!4.06e-17!57;UBERON:0005068!4.06e-17!57;UBERON:0006241!4.06e-17!57;UBERON:0007135!4.06e-17!57;UBERON:0003080!1.40e-15!42;UBERON:0002780!2.12e-15!41;UBERON:0001890!2.12e-15!41;UBERON:0006240!2.12e-15!41;UBERON:0000955!3.95e-14!69;UBERON:0006238!3.95e-14!69;UBERON:0000073!4.84e-14!94;UBERON:0001016!4.84e-14!94;UBERON:0001017!8.20e-14!82;UBERON:0002616!1.47e-13!59;UBERON:0005743!4.04e-13!86;UBERON:0002020!2.58e-12!34;UBERON:0003528!2.58e-12!34;UBERON:0001893!6.95e-12!34;UBERON:0002791!1.47e-11!33;UBERON:0001869!4.05e-11!32;UBERON:0002346!4.37e-11!90;UBERON:0003075!1.37e-10!86;UBERON:0007284!1.37e-10!86;UBERON:0000153!1.46e-08!129;UBERON:0007811!1.46e-08!129;UBERON:0002619!1.53e-08!22;UBERON:0000956!4.06e-08!25;UBERON:0000203!4.06e-08!25;UBERON:0001950!5.93e-08!20;UBERON:0003056!1.45e-07!61;UBERON:0000924!2.76e-07!173;UBERON:0006601!2.76e-07!173;UBERON:0000033!3.26e-07!123;UBERON:0004121!7.14e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!6.70e-35!115;UBERON:0001049!4.06e-17!57;UBERON:0005068!4.06e-17!57;UBERON:0006241!4.06e-17!57;UBERON:0007135!4.06e-17!57;UBERON:0003080!1.40e-15!42;UBERON:0002780!2.12e-15!41;UBERON:0001890!2.12e-15!41;UBERON:0006240!2.12e-15!41;UBERON:0000955!3.95e-14!69;UBERON:0006238!3.95e-14!69;UBERON:0000073!4.84e-14!94;UBERON:0001016!4.84e-14!94;UBERON:0001017!8.20e-14!82;UBERON:0002616!1.47e-13!59;UBERON:0005743!4.04e-13!86;UBERON:0002020!2.58e-12!34;UBERON:0003528!2.58e-12!34;UBERON:0001893!6.95e-12!34;UBERON:0002791!1.47e-11!33;UBERON:0001869!4.05e-11!32;UBERON:0002346!4.37e-11!90;UBERON:0003075!1.37e-10!86;UBERON:0007284!1.37e-10!86;UBERON:0000153!1.46e-08!129;UBERON:0007811!1.46e-08!129;UBERON:0002619!1.53e-08!22;UBERON:0000956!4.06e-08!25;UBERON:0000203!4.06e-08!25;UBERON:0001950!5.93e-08!20;UBERON:0003056!1.45e-07!61;UBERON:0000924!2.76e-07!173;UBERON:0006601!2.76e-07!173;UBERON:0000033!3.26e-07!123;UBERON:0004121!7.14e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.57e-11;41!UBERON:0001890;1.57e-11;41!UBERON:0003528;6.40e-11;34!UBERON:0002020;6.40e-11;34!UBERON:0001893;1.25e-10;34!UBERON:0002791;1.55e-10;32!UBERON:0001869;2.58e-10;32!UBERON:0007023;3.09e-10;114!UBERON:0000073;3.56e-10;53!UBERON:0002616;3.56e-10;53!UBERON:0002619;1.13e-08;22!UBERON:0000956;2.59e-08;25!UBERON:0000203;2.59e-08;25!UBERON:0001950;4.38e-08;20!UBERON:0000955;5.66e-07;68!UBERON:0001016;5.99e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.02e-34,114;UBERON:0001049,6.39e-17,56;UBERON:0005068,6.39e-17,56;UBERON:0006241,6.39e-17,56;UBERON:0007135,6.39e-17,56;UBERON:0000073,4.52e-16,53;UBERON:0002616,4.52e-16,53;UBERON:0002780,2.11e-15,41;UBERON:0001890,2.11e-15,41;UBERON:0003080,2.11e-15,41;UBERON:0006240,2.11e-15,41;UBERON:0001016,1.65e-14,89;UBERON:0000955,6.32e-14,68;UBERON:0006238,6.32e-14,68;UBERON:0001017,1.31e-13,81;UBERON:0003528,2.57e-12,34;UBERON:0002020,2.57e-12,34;UBERON:0001893,6.95e-12,34;UBERON:0002791,2.34e-11,32;UBERON:0001869,4.05e-11,32;UBERON:0011216,1.42e-10,223;UBERON:0002346,2.20e-10,86;UBERON:0003075,6.82e-10,82;UBERON:0007284,6.82e-10,82;UBERON:0002619,1.53e-08,22;UBERON:0000956,4.06e-08,25;UBERON:0000203,4.06e-08,25;UBERON:0001950,5.92e-08,20;UBERON:0003056,8.89e-08,61 | |||
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| ||
|short_description=p1@KRIT1 | |short_description=p1@KRIT1 | ||
}} | }} |
Latest revision as of 23:35, 19 September 2015
Short description: | p1@KRIT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRIT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000394503, ENST00000394505, ENST00000413688, ENST00000422347, ENST00000425073, ENST00000425919, ENST00000430102, ENST00000433016, ENST00000440209, ENST00000452773, ENST00000454017, ENST00000458493, ENST00000466166, ENST00000489087, NM_001013406, NM_004912, NM_194454, uc003ulr.1, uc003uls.1, uc003ult.1_5end |
EntrezGene: | KRIT1 |
HGNC: | 1573 |
UniProt: | A6NNU0O00522C9J3W7C9JI47C9JD43C9JSG7C9JBN7C9JF32C9JEW7C9JJM9C9J718C9JD81A4D1F7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.02e-34 | 114 |
neural tube | 6.39e-17 | 56 |
neural rod | 6.39e-17 | 56 |
future spinal cord | 6.39e-17 | 56 |
neural keel | 6.39e-17 | 56 |
regional part of nervous system | 4.52e-16 | 53 |
regional part of brain | 4.52e-16 | 53 |
regional part of forebrain | 2.11e-15 | 41 |
forebrain | 2.11e-15 | 41 |
anterior neural tube | 2.11e-15 | 41 |
future forebrain | 2.11e-15 | 41 |
nervous system | 1.65e-14 | 89 |
brain | 6.32e-14 | 68 |
future brain | 6.32e-14 | 68 |
central nervous system | 1.31e-13 | 81 |
brain grey matter | 2.57e-12 | 34 |
gray matter | 2.57e-12 | 34 |
telencephalon | 6.95e-12 | 34 |
regional part of telencephalon | 2.34e-11 | 32 |
cerebral hemisphere | 4.05e-11 | 32 |
organ system subdivision | 1.42e-10 | 223 |
neurectoderm | 2.20e-10 | 86 |
neural plate | 6.82e-10 | 82 |
presumptive neural plate | 6.82e-10 | 82 |
regional part of cerebral cortex | 1.53e-08 | 22 |
cerebral cortex | 4.06e-08 | 25 |
pallium | 4.06e-08 | 25 |
neocortex | 5.92e-08 | 20 |
pre-chordal neural plate | 8.89e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.76e-07 | 235 |