FFCP PHASE1:Hg19::chr7:45952418..45952432,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt=Q71RC0 | |UniProt=Q71RC0 | ||
|association_with_transcript=194bp_to_AF370418_5end | |association_with_transcript=194bp_to_AF370418_5end | ||
|cluster_id=chr7:45952418..45952432,- | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_11_at_IGFBP3_5end | |description=CAGE_peak_11_at_IGFBP3_5end | ||
|id=chr7:45952418..45952432,- | |id=chr7:45952418..45952432,- | ||
|ontology_enrichment_celltype=CL:0000057!5.10e-10!75;CL:0002620!2.46e-09!23;CL:0000055!3.92e-09!180;CL:0000153!5.87e-07!9;CL:0000447!5.87e-07!9 | |ontology_enrichment_celltype=CL:0000057!5.10e-10!75;CL:0002620!2.46e-09!23;CL:0000055!3.92e-09!180;CL:0000153!5.87e-07!9;CL:0000447!5.87e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.16e-18;23!CL:0000153;1.51e-11;9!CL:0000447;1.51e-11;9!CL:0000327;6.06e-11;15!CL:0000499;8.77e-10;28!CL:0002579;9.46e-09;3!CL:0000135;1.04e-08;3!CL:0000388;1.04e-08;3!CL:0000138;1.69e-08;6!CL:0000136;6.58e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.32e-18,23;CL:0000057,3.88e-14,76;CL:0000153,1.59e-11,9;CL:0000447,1.59e-11,9;CL:0000327,5.13e-11,15;CL:0000499,8.01e-10,28;CL:0000135,1.11e-08,3;CL:0000388,1.11e-08,3;CL:0002579,1.21e-08,3;CL:0000058,1.68e-08,6;CL:0000138,1.68e-08,6;CL:0000048,1.92e-07,427;CL:0000723,3.69e-07,433;CL:0000034,8.55e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.09e-07!5;DOID:450!3.09e-07!5;DOID:66!3.09e-07!5;DOID:423!3.09e-07!5;DOID:0080000!3.09e-07!5;DOID:11722!3.09e-07!5 | |ontology_enrichment_disease=DOID:17!3.09e-07!5;DOID:450!3.09e-07!5;DOID:66!3.09e-07!5;DOID:423!3.09e-07!5;DOID:0080000!3.09e-07!5;DOID:11722!3.09e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.21e-14;5!DOID:450;2.21e-14;5!DOID:66;2.21e-14;5!DOID:423;2.21e-14;5!DOID:0080000;2.21e-14;5!DOID:11722;2.21e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.32e-14,5;DOID:450,2.32e-14,5;DOID:66,2.32e-14,5;DOID:423,2.32e-14,5;DOID:0080000,2.32e-14,5;DOID:11722,2.32e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0000478!5.84e-08!24;UBERON:0003688!1.75e-07!6;UBERON:0002358!1.75e-07!6;UBERON:0003684!1.75e-07!6;UBERON:0001178!1.75e-07!6 | |ontology_enrichment_uberon=UBERON:0000478!5.84e-08!24;UBERON:0003688!1.75e-07!6;UBERON:0002358!1.75e-07!6;UBERON:0003684!1.75e-07!6;UBERON:0001178!1.75e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.99e-14;9!UBERON:0000042;2.99e-14;9!UBERON:0003688;2.43e-11;6!UBERON:0002358;2.43e-11;6!UBERON:0003684;2.43e-11;6!UBERON:0001178;2.43e-11;6!UBERON:0007846;1.04e-08;3!UBERON:0000043;1.04e-08;3!UBERON:0007845;1.04e-08;3!UBERON:0002097;2.16e-08;41!UBERON:0002199;1.45e-07;46!UBERON:0002416;1.45e-07;46!UBERON:0005631;8.45e-07;10!UBERON:0000158;8.45e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.00e-11,6;UBERON:0002358,3.00e-11,6;UBERON:0003684,3.00e-11,6;UBERON:0001178,3.00e-11,6;UBERON:0004457,2.55e-10,12;UBERON:0000042,2.55e-10,12;UBERON:0002097,2.64e-10,41;UBERON:0002199,2.96e-10,46;UBERON:0002416,2.96e-10,46;UBERON:0007846,1.11e-08,3;UBERON:0000043,1.11e-08,3;UBERON:0007845,1.11e-08,3 | |||
|phase1_expression=2.36181893051724,1.49870366723688,2.39622486963151,4.00293193412522,0.446961094427288,2.61701557230111,2.53299878168311,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,50.6014813338393,21.0561922467074,18.8300474649071,0.795285947051099,9.73269740605272,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0,1.14734648299525,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0,5.74046834204358,2.13557388818567,6.78182083710598,8.70264178644767,2.47326070172253,3.09168648054755,8.18914167858995,1.18143432568886,1.75386609290158,9.08761587278812,6.16734320903406,0.161646056818812,13.1353549231147,6.2466300901137,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330881918197182,0.217879444092406,0,0,0,0,0,0,0,1.47008711385542,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,1.20575750823834,0.871533458600294,0,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,2.17171960001369,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.713715955188647,0.473107245101804,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0.604780586659361,0.992431231275107,0.767309866440312,1.96462066103151,2.05022638809122,5.62877973973374,1.28683136914886,0,0,0.710246901252508,0.246381468041427,0,0.464841513839837,0,0,0.0920809889358963,0.574072240823034,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,1.85938219718914,4.40737285562896,0,0,0,0.869932992075073,1.8532421910392,1.14499909393593,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0.606547444719948,1.58510321173008,0,0,0.974853958525138,0,0,0,2.26016233240486,0.551365343546124,2.65375590096488,7.0152141640602,0,0,0,0,0,0,0,0.7133421029625,0,5.2776908824416,2.30506425071931,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,2.14870036263921,2.37571744666111,3.99308912729002,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,14.3078210324431,0.0898683511473268,0,0,0.295930216910801,0,2.22273980289274,0,0,0,0,0,0,0,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0.113942055847001,0,0,0,3.50901275705111,0.457987967009312,4.26427820814908,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0.195984794828755,0,0,1.0319161948297,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,2.79733453414982,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0.407992870545287,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,1.80149941771202,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,1.25501137532991,0,0,0,0.5085370753095,1.62899880526114,1.72844298240254,0.326587360109409,0,0,0.170388021785422,0.226624183040251,0.146552233678082,0,0,0.13223260174269,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,1.16856654923612,0,0.378806010550178,1.25783950876288,8.89811221596536,0,2.11723293268535,0.466311601748341,0.147855149989634,0,0,0,0,0.265841714557995,0.521745061811734,0.300515217994437,2.66563648518157,0,0,0,0.928067519756987,0,0.800055529326307,0.343395705182793,0.336749488765919,1.26184898228651,0,0,0,1.58694147858591,0,0,1.4327107286519,2.47041157728778,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0,0,0.637724760305049,0,0,1.27201740261367,0,0,0,0.918736432059601,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,1.66091155931474,0,0,0,0,0.620916591138472,0,0.171488009437418,0,0,0,0.111231401892069,0,0,0,0,6.0459725541214,20.0655708912561,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.8453114551668,3.22861517906852,0,0,0,0.892769693028288,0,0,0,0.458729283404541,0,0,0,0,0,1.11598505450025,2.77305377178851,4.75889218336168,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.213233981900981,0.476128862927481,0,0,0.112131862580613,0.0636471582781649,0,0,0.342233301085281,0,0,0,0,0.106727345877715,0,0.628776414746108,0,0.488965776731466,0.406896178315738,0,0,0 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| ||
|short_description=p11@IGFBP3 | |short_description=p11@IGFBP3 | ||
}} | }} |
Latest revision as of 19:17, 18 September 2015
Short description: | p11@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | 194bp_to_AF370418_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | Q71RC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.32e-18 | 23 |
fibroblast | 3.88e-14 | 76 |
GAG secreting cell | 1.59e-11 | 9 |
carbohydrate secreting cell | 1.59e-11 | 9 |
extracellular matrix secreting cell | 5.13e-11 | 15 |
stromal cell | 8.01e-10 | 28 |
fibrocyte | 1.11e-08 | 3 |
tendon cell | 1.11e-08 | 3 |
omentum preadipocyte | 1.21e-08 | 3 |
chondroblast | 1.68e-08 | 6 |
chondrocyte | 1.68e-08 | 6 |
multi fate stem cell | 1.92e-07 | 427 |
somatic stem cell | 3.69e-07 | 433 |
stem cell | 8.55e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.00e-11 | 6 |
peritoneum | 3.00e-11 | 6 |
abdominal cavity | 3.00e-11 | 6 |
visceral peritoneum | 3.00e-11 | 6 |
cavity lining | 2.55e-10 | 12 |
serous membrane | 2.55e-10 | 12 |
skin of body | 2.64e-10 | 41 |
integument | 2.96e-10 | 46 |
integumental system | 2.96e-10 | 46 |
dense regular connective tissue | 1.11e-08 | 3 |
tendon | 1.11e-08 | 3 |
regular connective tissue | 1.11e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.32e-14 | 5 |
myotonic disease | 2.32e-14 | 5 |
muscle tissue disease | 2.32e-14 | 5 |
myopathy | 2.32e-14 | 5 |
muscular disease | 2.32e-14 | 5 |
myotonic dystrophy | 2.32e-14 | 5 |