FFCP PHASE1:Hg19::chr7:44113612..44113641,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27434 | |EntrezGene=27434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9185 | |HGNC=9185 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=75bp_to_ENST00000467607_5end | |association_with_transcript=75bp_to_ENST00000467607_5end | ||
|cluster_id=chr7:44113612..44113641,- | |||
|coexpression_cluster_id=C2897 | |||
|description=CAGE_peak_3_at_POLM_5end | |description=CAGE_peak_3_at_POLM_5end | ||
|id=chr7:44113612..44113641,- | |id=chr7:44113612..44113641,- | ||
|ontology_enrichment_celltype=CL:0000066!1.15e-14!254;CL:0000071!8.57e-11!18;CL:0002546!8.57e-11!18;CL:0002139!1.01e-10!24;CL:0000115!2.52e-08!35;CL:0002078!4.45e-07!44;CL:0002368!8.25e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.15e-14!254;CL:0000071!8.57e-11!18;CL:0002546!8.57e-11!18;CL:0002139!1.01e-10!24;CL:0000115!2.52e-08!35;CL:0002078!4.45e-07!44;CL:0002368!8.25e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000071;8.71e-17;18!CL:0002139;1.11e-13;24!CL:1000413;2.77e-13;9!CL:0002368;9.04e-13;13!CL:0002202;3.02e-12;9!CL:0002632;3.02e-12;9!CL:0000115;1.75e-11;36!CL:0002078;2.59e-10;45!CL:0000244;1.54e-09;4!CL:0000731;1.54e-09;4!CL:0002076;2.81e-09;42!CL:0002544;2.36e-08;6!CL:0000307;6.38e-08;3!CL:0002328;8.64e-08;3!CL:0002621;1.47e-07;3!CL:0002144;1.83e-07;3!CL:1000497;4.65e-07;17!CL:0002518;4.65e-07;17!CL:0000213;6.45e-07;58!CL:0000215;6.45e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.05e-26,253;CL:0000071,8.29e-17,18;CL:0002546,8.29e-17,18;CL:0000115,7.48e-14,36;CL:0002139,1.28e-13,24;CL:0002078,2.68e-13,45;CL:1000413,2.79e-13,9;CL:0002368,8.83e-13,13;CL:0002076,2.23e-12,42;CL:0002202,3.22e-12,9;CL:0002632,3.22e-12,9;CL:0002321,5.41e-12,250;CL:0000223,1.12e-09,58;CL:0000244,1.31e-09,4;CL:0000731,1.31e-09,4;CL:0000076,3.84e-09,63;CL:0000213,5.37e-09,58;CL:0000215,5.37e-09,58;CL:0002544,2.60e-08,6;CL:0000068,6.18e-08,3;CL:0000069,6.18e-08,3;CL:0000307,6.18e-08,3;CL:0000377,6.18e-08,3;CL:0002328,9.69e-08,3;CL:0002621,1.16e-07,3;CL:0002144,1.76e-07,3;CL:1000497,5.28e-07,17;CL:0002518,5.28e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;8.71e-17;18!CL:0000377;6.38e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!8.57e-11!18;UBERON:0004638!8.57e-11!18;UBERON:0004852!8.57e-11!18;UBERON:0000487!6.16e-09!22;UBERON:0000058!5.05e-07!26;UBERON:0006914!5.27e-07!25 | |ontology_enrichment_uberon=UBERON:0001986!8.57e-11!18;UBERON:0004638!8.57e-11!18;UBERON:0004852!8.57e-11!18;UBERON:0000487!6.16e-09!22;UBERON:0000058!5.05e-07!26;UBERON:0006914!5.27e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.71e-17;18!UBERON:0001986;8.71e-17;18!UBERON:0004852;8.71e-17;18!UBERON:0000490;6.44e-16;33!UBERON:0000487;1.37e-15;22!UBERON:0006914;2.75e-13;25!UBERON:0003915;2.77e-13;9!UBERON:0004700;2.77e-13;9!UBERON:0001917;2.77e-13;9!UBERON:0000365;9.63e-12;5!UBERON:0000486;3.54e-11;12!UBERON:0005910;1.07e-09;6!UBERON:0006554;1.12e-09;30!UBERON:0001008;1.12e-09;30!UBERON:0005911;8.96e-09;36!UBERON:0004815;8.64e-08;3!UBERON:0002031;8.64e-08;3!UBERON:0001949;1.47e-07;3!UBERON:0010523;1.83e-07;3!UBERON:0001915;1.83e-07;3!UBERON:0001982;1.83e-07;3!UBERON:0007196;8.01e-07;15!UBERON:0001558;8.01e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.29e-17,18;UBERON:0001986,8.29e-17,18;UBERON:0004852,8.29e-17,18;UBERON:0000487,1.31e-15,22;UBERON:0006914,2.65e-13,25;UBERON:0003915,2.79e-13,9;UBERON:0004700,2.79e-13,9;UBERON:0001917,2.79e-13,9;UBERON:0000365,8.38e-12,5;UBERON:0005910,9.57e-10,6;UBERON:0004815,9.69e-08,3;UBERON:0002031,9.69e-08,3;UBERON:0001949,1.16e-07,3;UBERON:0010523,1.76e-07,3;UBERON:0001915,1.76e-07,3;UBERON:0001982,1.76e-07,3;UBERON:0006554,5.51e-07,47;UBERON:0007196,8.30e-07,15;UBERON:0001558,8.30e-07,15;UBERON:0001008,9.11e-07,48 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,2.09340350391728,0,0.263766978228454,0,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0.464448369948228,9.19421224478927,6.6265302131215,4.06729411183466,0.0774672005803016,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0.44931452458598,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0,0,0,0,1.94826728407911,0.222820913770347,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0.50133791063589,0.144846518960824,1.5905718941022,0.973269740605272,0,1.10864698731282,0.263504357079378,0.261958150995425,1.09288586487763,0.741568885568859,0,0.174129737299267,0.797747763113191,0,0,0,1.59009925893364,5.16140757063675,3.47140501607594,1.69592382577203,2.51699661725944,2.47606237746061,1.67195973229448,0.258416759169329,0.71153252537342,0,3.62546385398232,12.9246257972147,2.68468263302986,1.10298924103761,0,0.535798369704479,0.44905874525234,0.450445921933289,3.06633274931766,2.84779697870439,0.366403487860815,25.038279312852,3.87780264148325,0,0,0.12663051166458,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,2.85815839756851,0.245668634623536,0.929932030581889,0,0,1.82032272387605,0.718618141816238,0,0.125118519871964,4.71008996323111,0,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0,0,0,0.772921620136887,0.930584281657949,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0.169560592310488,29.7621713871477,9.81886034127005,1.72082757233402,0.243947412259191,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0.653638332277218,0,0.404493924480493,0.392442930250692,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0,0,1.02940686179115,0,1.1240175325762,0,0.277765335475589,0,4.15973914111831,0,0.115930404975077,0.469634776943287,1.01056513432752,0,0.570762456703795,0,0,0,1.17002132569619,0.148631162288728,11.2480600784132,1.34385702559088,0.283550194484773,0,0,0,0.985326475791887,0.44024217006613,0.207328115540772,0.288239906833923,0.37872730027914,0.063497894292169,0,1.17217447210047,1.71072446022705,0,0,0,0.560655421726804,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0.771622122786426,0,0.799266537048298,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.579125226670317,1.2328579353023,1.43248770591916,0,0.197030760201927,0,0.641715181398742,0,0,0,0,0,8.23907726341901,2.99161459204025,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,2.27407504055985,0,0,0.553107505625109,0.0868836144680828,0.195801157462741,0,0,0.862856803274467,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0.116210378459959,0.120859449591622,3.60911646545913,0.184161977871793,0,0,0,5.41439535488894,0.770153371044148,1.56869953835371,0,0,2.27466768141793,2.2112181685947,0.431831832204279,0,0.270946437543853,0.501689773854853,9.43042210266642,13.2972161428596,0.223874754722178,0,0,0,0,0,0,0,0,6.89118645595407,0,0,0.193341436584244,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.340906509664404,0,0.495854746082934,1.92190067365106,2.04180339991335,0.2023155617111,0,0,0,0.924100740528266,0,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0.487426979262569,2.11300293513511,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,7.79399113076648,4.69211592875051,19.6003772750381,0.0941438007767792,10.7626343167807,1.68471475667626,5.32116184244011,15.8509146142802,0,0,0,0,0.411362273086194,0,0,0,0.213648142254946,0,0,1.85803175125719,0.577076851905779,2.98795742063339,0,0.399158742865633,0,3.59845090630601,0,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0.66614393599564,0,0.748562161632879,0.146508179271894,0.121360521749513,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,9.88551862620595,0.537063524026827,0,0.0986434056369336,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,8.39037045966129,0.472775363535873,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0.10893846351899,0,0.615602068030377,0,0,0,0,0,0.183195186803725,0,0,0,1.66211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0.208843899010911,0.067401132980677,0,0,0.182454789215666,1.17398771359254,0,2.76209081994573,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0.52418000472609,0.34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| ||
|short_description=p3@POLM | |short_description=p3@POLM | ||
}} | }} |
Latest revision as of 16:20, 18 September 2015
Short description: | p3@POLM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_POLM_5end |
Coexpression cluster: | C2897_Gingival_Eosinophils_Tracheal_squamous_papillary_signet_Endothelial |
Association with transcript: | 75bp_to_ENST00000467607_5end |
EntrezGene: | POLM |
HGNC: | 9185 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.05e-26 | 253 |
blood vessel endothelial cell | 8.29e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.29e-17 | 18 |
endothelial cell | 7.48e-14 | 36 |
endothelial cell of vascular tree | 1.28e-13 | 24 |
meso-epithelial cell | 2.68e-13 | 45 |
endothelial cell of artery | 2.79e-13 | 9 |
respiratory epithelial cell | 8.83e-13 | 13 |
endo-epithelial cell | 2.23e-12 | 42 |
epithelial cell of tracheobronchial tree | 3.22e-12 | 9 |
epithelial cell of lower respiratory tract | 3.22e-12 | 9 |
embryonic cell | 5.41e-12 | 250 |
endodermal cell | 1.12e-09 | 58 |
transitional epithelial cell | 1.31e-09 | 4 |
urothelial cell | 1.31e-09 | 4 |
squamous epithelial cell | 3.84e-09 | 63 |
lining cell | 5.37e-09 | 58 |
barrier cell | 5.37e-09 | 58 |
aortic endothelial cell | 2.60e-08 | 6 |
duct epithelial cell | 6.18e-08 | 3 |
branched duct epithelial cell | 6.18e-08 | 3 |
tracheal epithelial cell | 6.18e-08 | 3 |
tracheoblast | 6.18e-08 | 3 |
bronchial epithelial cell | 9.69e-08 | 3 |
gingival epithelial cell | 1.16e-07 | 3 |
capillary endothelial cell | 1.76e-07 | 3 |
kidney cell | 5.28e-07 | 17 |
kidney epithelial cell | 5.28e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.29e-17 | 18 |
endothelium | 8.29e-17 | 18 |
cardiovascular system endothelium | 8.29e-17 | 18 |
simple squamous epithelium | 1.31e-15 | 22 |
squamous epithelium | 2.65e-13 | 25 |
endothelial tube | 2.79e-13 | 9 |
arterial system endothelium | 2.79e-13 | 9 |
endothelium of artery | 2.79e-13 | 9 |
urothelium | 8.38e-12 | 5 |
transitional epithelium | 9.57e-10 | 6 |
lower respiratory tract epithelium | 9.69e-08 | 3 |
epithelium of bronchus | 9.69e-08 | 3 |
gingival epithelium | 1.16e-07 | 3 |
microcirculatory vessel | 1.76e-07 | 3 |
endothelium of capillary | 1.76e-07 | 3 |
capillary | 1.76e-07 | 3 |
urinary system structure | 5.51e-07 | 47 |
tracheobronchial tree | 8.30e-07 | 15 |
lower respiratory tract | 8.30e-07 | 15 |
renal system | 9.11e-07 | 48 |