FFCP PHASE1:Hg19::chr16:66400553..66400565,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:66400553..66400565,+
|short_description=p3@CDH5
|description=CAGE_peak_3_at_CDH5_5end
|association_with_transcript=20bp_to_ENST00000341529_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1003 | |EntrezGene=1003 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1764 | |HGNC=1764 | ||
|TSSclassifier=strong | |||
|UniProt=P33151 | |UniProt=P33151 | ||
|association_with_transcript=20bp_to_ENST00000341529_5end | |||
|cluster_id=chr16:66400553..66400565,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_3_at_CDH5_5end | |||
|id=chr16:66400553..66400565,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.00e-25!24;CL:0000115!1.40e-22!35;CL:0000071!3.19e-19!18;CL:0002546!3.19e-19!18;CL:0002078!2.68e-15!44;CL:1000413!1.49e-10!9;CL:0000213!3.52e-09!57;CL:0000215!3.52e-09!57;CL:0005020!1.42e-07!6;CL:0002138!1.42e-07!6;CL:0005022!1.42e-07!6;CL:0002544!1.45e-07!6;CL:0002543!2.49e-07!6;CL:0000222!7.20e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.95e-33;24!CL:0000115;5.11e-27;36!CL:0000071;5.95e-25;18!CL:0002078;5.72e-15;45!CL:1000413;1.84e-13;9!CL:0000213;3.28e-10;58!CL:0000215;3.28e-10;58!CL:0002138;1.59e-09;6!CL:0002544;1.63e-09;6!CL:0002543;3.37e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.16e-33,24;CL:0000115,7.94e-32,36;CL:0000071,6.09e-25,18;CL:0002546,6.09e-25,18;CL:0002078,4.69e-23,45;CL:0000213,2.30e-15,58;CL:0000215,2.30e-15,58;CL:1000413,1.85e-13,9;CL:0005020,1.60e-09,6;CL:0002138,1.60e-09,6;CL:0005022,1.60e-09,6;CL:0002544,1.65e-09,6;CL:0002543,3.36e-09,6;CL:0000222,4.32e-09,121 | |||
|ontology_enrichment_development_v019=CL:0002546;5.95e-25;18!CL:0005022;1.59e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@CDH5 | |||
}} | }} |
Latest revision as of 08:09, 17 September 2015
Short description: | p3@CDH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDH5_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 20bp_to_ENST00000341529_5end |
EntrezGene: | CDH5 |
HGNC: | 1764 |
UniProt: | P33151 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.16e-33 | 24 |
endothelial cell | 7.94e-32 | 36 |
blood vessel endothelial cell | 6.09e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.09e-25 | 18 |
meso-epithelial cell | 4.69e-23 | 45 |
lining cell | 2.30e-15 | 58 |
barrier cell | 2.30e-15 | 58 |
endothelial cell of artery | 1.85e-13 | 9 |
lymphangioblast | 1.60e-09 | 6 |
endothelial cell of lymphatic vessel | 1.60e-09 | 6 |
vascular lymphangioblast | 1.60e-09 | 6 |
aortic endothelial cell | 1.65e-09 | 6 |
vein endothelial cell | 3.36e-09 | 6 |
mesodermal cell | 4.32e-09 | 121 |