FFCP PHASE1:Hg19::chr7:124569941..124569993,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000435452,ENST00000449642,ENST00000453342,uc003vlp.2,uc003vlq.1,uc010lkx.1_5end | |association_with_transcript=0bp_to_ENST00000435452,ENST00000449642,ENST00000453342,uc003vlp.2,uc003vlq.1,uc010lkx.1_5end | ||
|cluster_id=chr7:124569941..124569993,+ | |||
|coexpression_cluster_id=C4104 | |||
|description=CAGE_peak_1_at_ENST00000435452_5end,CAGE_peak_1_at_ENST00000449642_5end,CAGE_peak_1_at_ENST00000453342_5end,CAGE_peak_1_at_uc003vlp.2_5end,CAGE_peak_1_at_uc003vlq.1_5end,CAGE_peak_1_at_uc010lkx.1_5end | |description=CAGE_peak_1_at_ENST00000435452_5end,CAGE_peak_1_at_ENST00000449642_5end,CAGE_peak_1_at_ENST00000453342_5end,CAGE_peak_1_at_uc003vlp.2_5end,CAGE_peak_1_at_uc003vlq.1_5end,CAGE_peak_1_at_uc010lkx.1_5end | ||
|id=chr7:124569941..124569993,+ | |id=chr7:124569941..124569993,+ | ||
|ontology_enrichment_celltype=CL:0000838!5.30e-08!52;CL:0000542!1.10e-07!53;CL:0000051!1.10e-07!53 | |ontology_enrichment_celltype=CL:0000838!5.30e-08!52;CL:0000542!1.10e-07!53;CL:0000051!1.10e-07!53 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.88e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.93e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.20e-35!94;UBERON:0001016!2.20e-35!94;UBERON:0005743!2.51e-34!86;UBERON:0001017!2.24e-33!82;UBERON:0001049!4.52e-33!57;UBERON:0005068!4.52e-33!57;UBERON:0006241!4.52e-33!57;UBERON:0007135!4.52e-33!57;UBERON:0002346!2.61e-31!90;UBERON:0003075!7.66e-30!86;UBERON:0007284!7.66e-30!86;UBERON:0002616!1.45e-29!59;UBERON:0000955!5.91e-29!69;UBERON:0006238!5.91e-29!69;UBERON:0002780!4.34e-26!41;UBERON:0001890!4.34e-26!41;UBERON:0006240!4.34e-26!41;UBERON:0003080!7.05e-26!42;UBERON:0007023!8.79e-26!115;UBERON:0003056!1.11e-24!61;UBERON:0002020!1.60e-21!34;UBERON:0003528!1.60e-21!34;UBERON:0001893!2.36e-21!34;UBERON:0002791!8.11e-21!33;UBERON:0000153!1.24e-20!129;UBERON:0007811!1.24e-20!129;UBERON:0001869!4.66e-20!32;UBERON:0000924!2.66e-19!173;UBERON:0006601!2.66e-19!173;UBERON:0000033!7.20e-19!123;UBERON:0004121!4.47e-18!169;UBERON:0000956!1.34e-15!25;UBERON:0000203!1.34e-15!25;UBERON:0002619!2.72e-14!22;UBERON:0001950!4.89e-13!20;UBERON:0003076!2.57e-08!15;UBERON:0003057!2.57e-08!15;UBERON:0000064!1.57e-07!219;UBERON:0002308!2.06e-07!9;UBERON:0000125!2.06e-07!9;UBERON:0002420!2.89e-07!9;UBERON:0007245!2.89e-07!9;UBERON:0010009!2.89e-07!9;UBERON:0010011!2.89e-07!9;UBERON:0000454!2.89e-07!9;UBERON:0004732!4.71e-07!13 | |ontology_enrichment_uberon=UBERON:0000073!2.20e-35!94;UBERON:0001016!2.20e-35!94;UBERON:0005743!2.51e-34!86;UBERON:0001017!2.24e-33!82;UBERON:0001049!4.52e-33!57;UBERON:0005068!4.52e-33!57;UBERON:0006241!4.52e-33!57;UBERON:0007135!4.52e-33!57;UBERON:0002346!2.61e-31!90;UBERON:0003075!7.66e-30!86;UBERON:0007284!7.66e-30!86;UBERON:0002616!1.45e-29!59;UBERON:0000955!5.91e-29!69;UBERON:0006238!5.91e-29!69;UBERON:0002780!4.34e-26!41;UBERON:0001890!4.34e-26!41;UBERON:0006240!4.34e-26!41;UBERON:0003080!7.05e-26!42;UBERON:0007023!8.79e-26!115;UBERON:0003056!1.11e-24!61;UBERON:0002020!1.60e-21!34;UBERON:0003528!1.60e-21!34;UBERON:0001893!2.36e-21!34;UBERON:0002791!8.11e-21!33;UBERON:0000153!1.24e-20!129;UBERON:0007811!1.24e-20!129;UBERON:0001869!4.66e-20!32;UBERON:0000924!2.66e-19!173;UBERON:0006601!2.66e-19!173;UBERON:0000033!7.20e-19!123;UBERON:0004121!4.47e-18!169;UBERON:0000956!1.34e-15!25;UBERON:0000203!1.34e-15!25;UBERON:0002619!2.72e-14!22;UBERON:0001950!4.89e-13!20;UBERON:0003076!2.57e-08!15;UBERON:0003057!2.57e-08!15;UBERON:0000064!1.57e-07!219;UBERON:0002308!2.06e-07!9;UBERON:0000125!2.06e-07!9;UBERON:0002420!2.89e-07!9;UBERON:0007245!2.89e-07!9;UBERON:0010009!2.89e-07!9;UBERON:0010011!2.89e-07!9;UBERON:0000454!2.89e-07!9;UBERON:0004732!4.71e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.11e-28;41!UBERON:0001890;2.11e-28;41!UBERON:0003528;1.07e-27;34!UBERON:0002020;1.07e-27;34!UBERON:0001893;2.02e-27;34!UBERON:0002791;2.05e-27;32!UBERON:0001869;3.43e-27;32!UBERON:0000073;1.07e-26;53!UBERON:0002616;1.07e-26;53!UBERON:0000956;4.77e-23;25!UBERON:0000203;4.77e-23;25!UBERON:0002619;3.48e-21;22!UBERON:0001017;4.77e-20;75!UBERON:0001950;2.81e-19;20!UBERON:0000955;3.90e-19;68!UBERON:0001016;9.46e-17;83!UBERON:0000125;1.20e-10;9!UBERON:0002308;1.20e-10;9!UBERON:0002420;2.22e-10;9!UBERON:0007245;2.22e-10;9!UBERON:0010009;2.22e-10;9!UBERON:0010011;2.22e-10;9!UBERON:0000454;2.22e-10;9!UBERON:0007023;4.20e-09;114!UBERON:0004732;6.56e-09;13!UBERON:0001894;9.18e-09;7!UBERON:0009663;1.29e-08;7!UBERON:0004733;5.68e-08;12!UBERON:0002028;5.68e-08;12!UBERON:0002298;1.53e-07;6!UBERON:0001871;5.84e-07;6 | |||
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| ||
|short_description=p1@ENST00000435452,p1@ENST00000449642,p1@ENST00000453342,p1@uc003vlp.2,p1@uc003vlq.1,p1@uc010lkx.1 | |short_description=p1@ENST00000435452,p1@ENST00000449642,p1@ENST00000453342,p1@uc003vlp.2,p1@uc003vlq.1,p1@uc010lkx.1 | ||
}} | }} |
Latest revision as of 05:39, 31 July 2015
Short description: | p1@ENST00000435452, p1@ENST00000449642, p1@ENST00000453342, p1@uc003vlp.2, p1@uc003vlq.1, p1@uc010lkx.1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000435452_5end, CAGE_peak_1_at_ENST00000449642_5end, CAGE_peak_1_at_ENST00000453342_5end, CAGE_peak_1_at_uc003vlp.2_5end, CAGE_peak_1_at_uc003vlq.1_5end, CAGE_peak_1_at_uc010lkx.1_5end |
Coexpression cluster: | C4104_pineal_parietal_pituitary_testis_caudate_spinal_thalamus |
Association with transcript: | 0bp_to_ENST00000435452, ENST00000449642, ENST00000453342, uc003vlp.2, uc003vlq.1, uc010lkx.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.88e-07 | 52 |