FFCP PHASE1:Hg19::chr7:100239132..100239196,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7036 | |EntrezGene=7036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11762 | |HGNC=11762 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UP52,E7ET36 | |UniProt=Q9UP52,E7ET36 | ||
|association_with_transcript=0bp_to_ENST00000223051,ENST00000431692,ENST00000465294,NM_003227_5end | |association_with_transcript=0bp_to_ENST00000223051,ENST00000431692,ENST00000465294,NM_003227_5end | ||
|cluster_id=chr7:100239132..100239196,- | |||
|coexpression_cluster_id=C2605 | |||
|description=CAGE_peak_3_at_TFR2_5end | |description=CAGE_peak_3_at_TFR2_5end | ||
|id=chr7:100239132..100239196,- | |id=chr7:100239132..100239196,- | ||
|ontology_enrichment_celltype=CL:0000181!6.93e-14!12;CL:0000417!6.93e-14!12;CL:0000668!6.93e-14!12;CL:0000414!6.93e-14!12;CL:0000412!6.93e-14!12;CL:0000182!6.93e-14!12;CL:0000764!4.65e-09!2;CL:0000765!4.65e-09!2;CL:0000050!4.65e-09!2;CL:0000038!4.65e-09!2;CL:0000558!4.65e-09!2;CL:0000547!4.65e-09!2;CL:0000549!4.65e-09!2;CL:0000550!4.65e-09!2;CL:0000552!4.65e-09!2 | |ontology_enrichment_celltype=CL:0000181!6.93e-14!12;CL:0000417!6.93e-14!12;CL:0000668!6.93e-14!12;CL:0000414!6.93e-14!12;CL:0000412!6.93e-14!12;CL:0000182!6.93e-14!12;CL:0000764!4.65e-09!2;CL:0000765!4.65e-09!2;CL:0000050!4.65e-09!2;CL:0000038!4.65e-09!2;CL:0000558!4.65e-09!2;CL:0000547!4.65e-09!2;CL:0000549!4.65e-09!2;CL:0000550!4.65e-09!2;CL:0000552!4.65e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;4.85e-14;2!CL:0000558;4.85e-14;2!CL:0002032;3.84e-07;1!CL:0000037;3.84e-07;1!CL:0001024;3.84e-07;1!CL:0000557;3.84e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.85e-14,2;CL:0000765,4.85e-14,2;CL:0000050,4.85e-14,2;CL:0000038,4.85e-14,2;CL:0000558,4.85e-14,2;CL:0000547,4.85e-14,2;CL:0000549,4.85e-14,2;CL:0000550,4.85e-14,2;CL:0000552,4.85e-14,2;CL:0000763,1.04e-09,108;CL:0000049,1.04e-09,108;CL:0001024,4.61e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.84e-07;1 | |||
|ontology_enrichment_disease=DOID:8692!8.51e-18!31;DOID:1036!5.72e-17!8;DOID:1240!1.64e-13!39;DOID:2531!1.25e-09!51;DOID:0060083!1.25e-09!51 | |ontology_enrichment_disease=DOID:8692!8.51e-18!31;DOID:1036!5.72e-17!8;DOID:1240!1.64e-13!39;DOID:2531!1.25e-09!51;DOID:0060083!1.25e-09!51 | ||
|ontology_enrichment_disease_v019=DOID:1036;9.67e-28;8!DOID:8692;4.44e-26;31!DOID:1240;1.57e-16;39!DOID:2531;5.61e-11;51!DOID:0060083;5.61e-11;51!DOID:8552;1.89e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.04e-27,8;DOID:8692,1.94e-26,31;DOID:1240,1.54e-20,39;DOID:2531,3.71e-15,51;DOID:0060083,3.71e-15,51;DOID:8552,1.83e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005057!1.10e-14!26;UBERON:0002107!4.10e-14!19;UBERON:0006925!4.10e-14!19;UBERON:0008836!4.10e-14!19;UBERON:0008835!5.93e-12!22;UBERON:0003894!5.93e-12!22;UBERON:0009854!2.33e-11!23;UBERON:0000178!8.02e-11!15;UBERON:0000179!8.02e-11!15;UBERON:0000463!8.02e-11!15;UBERON:0007499!2.58e-10!25;UBERON:0009497!2.58e-10!25;UBERON:0000015!2.58e-10!25;UBERON:0002423!2.58e-10!25;UBERON:0006235!2.58e-10!25;UBERON:0004161!2.58e-10!25;UBERON:0009856!7.48e-10!26;UBERON:0002368!1.92e-08!35;UBERON:0002365!5.39e-08!31;UBERON:0002330!5.39e-08!31 | |ontology_enrichment_uberon=UBERON:0005057!1.10e-14!26;UBERON:0002107!4.10e-14!19;UBERON:0006925!4.10e-14!19;UBERON:0008836!4.10e-14!19;UBERON:0008835!5.93e-12!22;UBERON:0003894!5.93e-12!22;UBERON:0009854!2.33e-11!23;UBERON:0000178!8.02e-11!15;UBERON:0000179!8.02e-11!15;UBERON:0000463!8.02e-11!15;UBERON:0007499!2.58e-10!25;UBERON:0009497!2.58e-10!25;UBERON:0000015!2.58e-10!25;UBERON:0002423!2.58e-10!25;UBERON:0006235!2.58e-10!25;UBERON:0004161!2.58e-10!25;UBERON:0009856!7.48e-10!26;UBERON:0002368!1.92e-08!35;UBERON:0002365!5.39e-08!31;UBERON:0002330!5.39e-08!31 | ||
|ontology_enrichment_uberon_v019=UBERON:0002390;7.44e-11;32!UBERON:0000178;1.23e-09;15!UBERON:0000179;1.23e-09;15!UBERON:0000463;1.23e-09;15!UBERON:0002107;3.15e-08;19!UBERON:0006925;3.15e-08;19!UBERON:0002084;3.84e-07;1!UBERON:0002082;3.84e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.18e-09,15;UBERON:0000179,1.18e-09,15;UBERON:0000463,1.18e-09,15;UBERON:0002107,3.13e-08,19;UBERON:0006925,3.13e-08,19;UBERON:0008836,3.13e-08,19;UBERON:0002084,3.84e-07,1;UBERON:0002082,3.84e-07,1;UBERON:0010226,3.84e-07,1;UBERON:0008835,4.54e-07,22;UBERON:0003894,4.54e-07,22;UBERON:0009854,9.49e-07,23 | |||
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| ||
|short_description=p3@TFR2 | |short_description=p3@TFR2 | ||
}} | }} |
Latest revision as of 07:59, 20 September 2015
Short description: | p3@TFR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TFR2_5end |
Coexpression cluster: | C2605_Reticulocytes_liver_Hepatocyte_retina_left_heart_gastrointestinal |
Association with transcript: | 0bp_to_ENST00000223051, ENST00000431692, ENST00000465294, NM_003227_5end |
EntrezGene: | TFR2 |
HGNC: | 11762 |
UniProt: | Q9UP52E7ET36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.85e-14 | 2 |
erythroblast | 4.85e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 4.85e-14 | 2 |
erythroid progenitor cell | 4.85e-14 | 2 |
reticulocyte | 4.85e-14 | 2 |
proerythroblast | 4.85e-14 | 2 |
basophilic erythroblast | 4.85e-14 | 2 |
polychromatophilic erythroblast | 4.85e-14 | 2 |
orthochromatic erythroblast | 4.85e-14 | 2 |
myeloid cell | 1.04e-09 | 108 |
common myeloid progenitor | 1.04e-09 | 108 |
CD34-positive, CD38-negative hematopoietic stem cell | 4.61e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 1.18e-09 | 15 |
haemolymphatic fluid | 1.18e-09 | 15 |
organism substance | 1.18e-09 | 15 |
liver | 3.13e-08 | 19 |
digestive gland | 3.13e-08 | 19 |
liver bud | 3.13e-08 | 19 |
heart left ventricle | 3.84e-07 | 1 |
cardiac ventricle | 3.84e-07 | 1 |
future cardiac ventricle | 3.84e-07 | 1 |
hepatic diverticulum | 4.54e-07 | 22 |
liver primordium | 4.54e-07 | 22 |
digestive tract diverticulum | 9.49e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.04e-27 | 8 |
myeloid leukemia | 1.94e-26 | 31 |
leukemia | 1.54e-20 | 39 |
hematologic cancer | 3.71e-15 | 51 |
immune system cancer | 3.71e-15 | 51 |
chronic myeloid leukemia | 1.83e-07 | 1 |