FFCP PHASE1:Hg19::chr6:52441791..52441804,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9697 | |EntrezGene=9697 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16855 | |HGNC=16855 | ||
|TSSclassifier=strong | |||
|UniProt=Q15035 | |UniProt=Q15035 | ||
|association_with_transcript=57bp_to_NM_012288,uc003paq.2_5end | |association_with_transcript=57bp_to_NM_012288,uc003paq.2_5end | ||
|cluster_id=chr6:52441791..52441804,- | |||
|coexpression_cluster_id=C4613 | |||
|description=CAGE_peak_3_at_TRAM2_5end | |description=CAGE_peak_3_at_TRAM2_5end | ||
|id=chr6:52441791..52441804,- | |id=chr6:52441791..52441804,- | ||
|ontology_enrichment_celltype=CL:0000055!4.74e-40!180;CL:0000057!3.53e-27!75;CL:0000222!1.11e-17!119;CL:0000680!6.19e-14!57;CL:0000056!6.19e-14!57;CL:0000355!6.19e-14!57;CL:0000183!7.41e-14!59;CL:0002620!2.03e-13!23;CL:0000187!1.74e-12!54;CL:0000144!1.77e-12!625;CL:0002371!2.45e-12!591;CL:0000192!5.17e-10!42;CL:0000514!5.17e-10!42;CL:0000220!5.93e-10!246;CL:0002321!1.28e-09!248;CL:0000393!2.63e-09!60;CL:0000211!2.63e-09!60;CL:0000048!4.26e-09!430;CL:0000548!4.72e-09!679;CL:0000004!4.72e-09!679;CL:0000255!4.72e-09!679;CL:0000012!1.17e-08!682;CL:0000723!4.25e-08!436;CL:0000359!2.72e-07!32;CL:0000034!3.94e-07!444 | |ontology_enrichment_celltype=CL:0000055!4.74e-40!180;CL:0000057!3.53e-27!75;CL:0000222!1.11e-17!119;CL:0000680!6.19e-14!57;CL:0000056!6.19e-14!57;CL:0000355!6.19e-14!57;CL:0000183!7.41e-14!59;CL:0002620!2.03e-13!23;CL:0000187!1.74e-12!54;CL:0000144!1.77e-12!625;CL:0002371!2.45e-12!591;CL:0000192!5.17e-10!42;CL:0000514!5.17e-10!42;CL:0000220!5.93e-10!246;CL:0002321!1.28e-09!248;CL:0000393!2.63e-09!60;CL:0000211!2.63e-09!60;CL:0000048!4.26e-09!430;CL:0000548!4.72e-09!679;CL:0000004!4.72e-09!679;CL:0000255!4.72e-09!679;CL:0000012!1.17e-08!682;CL:0000723!4.25e-08!436;CL:0000359!2.72e-07!32;CL:0000034!3.94e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.16e-17;23!CL:0000057;1.26e-14;73!CL:0002320;3.20e-10;188!CL:0000134;4.84e-09;55!CL:0000192;5.02e-09;43!CL:0000187;8.41e-09;55!CL:0000723;3.87e-08;61!CL:0000048;6.37e-08;58!CL:0000359;4.63e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.92e-36,76;CL:0000222,2.04e-19,121;CL:0000048,4.27e-19,427;CL:0000723,5.69e-18,433;CL:0002620,3.47e-17,23;CL:0000034,1.54e-16,441;CL:0000680,1.68e-15,58;CL:0000056,1.68e-15,58;CL:0000355,1.68e-15,58;CL:0000187,1.08e-13,55;CL:0000192,6.23e-11,43;CL:0000514,6.23e-11,43;CL:0000393,6.84e-11,61;CL:0000211,6.84e-11,61;CL:0002320,1.71e-09,361;CL:0002321,1.10e-08,250;CL:0000359,1.92e-07,32;CL:0000219,1.94e-07,386;CL:0000134,2.51e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;5.02e-09;43!CL:0000355;8.23e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.60e-19!83;UBERON:0002329!8.60e-19!83;UBERON:0003077!8.60e-19!83;UBERON:0003059!8.60e-19!83;UBERON:0007282!8.60e-19!83;UBERON:0009618!8.60e-19!83;UBERON:0007285!8.60e-19!83;UBERON:0004290!4.51e-17!70;UBERON:0002049!9.88e-17!79;UBERON:0007798!9.88e-17!79;UBERON:0005256!5.52e-15!143;UBERON:0000486!1.29e-14!82;UBERON:0000490!1.29e-13!138;UBERON:0000055!2.00e-13!69;UBERON:0001134!4.33e-13!61;UBERON:0002036!4.33e-13!61;UBERON:0003082!4.33e-13!61;UBERON:0004872!4.81e-13!84;UBERON:0004535!5.01e-13!110;UBERON:0002385!9.15e-13!63;UBERON:0001015!9.15e-13!63;UBERON:0000383!9.15e-13!63;UBERON:0001009!1.83e-12!113;UBERON:0001981!8.34e-11!60;UBERON:0007500!8.34e-11!60;UBERON:0004537!8.34e-11!60;UBERON:0006965!8.34e-11!60;UBERON:0003914!2.82e-10!118;UBERON:0002100!3.12e-10!216;UBERON:0000475!2.58e-09!365;UBERON:0003102!1.02e-08!95;UBERON:0001637!2.41e-08!42;UBERON:0003509!2.41e-08!42;UBERON:0004572!2.41e-08!42;UBERON:0002199!3.35e-08!45;UBERON:0002416!3.35e-08!45;UBERON:0002097!1.11e-07!40;UBERON:0000481!4.45e-07!347;UBERON:0004573!4.86e-07!33;UBERON:0004571!4.86e-07!33;UBERON:0003104!6.13e-07!238;UBERON:0009142!6.13e-07!238;UBERON:0000477!6.71e-07!286;UBERON:0000119!9.53e-07!312 | |ontology_enrichment_uberon=UBERON:0000914!8.60e-19!83;UBERON:0002329!8.60e-19!83;UBERON:0003077!8.60e-19!83;UBERON:0003059!8.60e-19!83;UBERON:0007282!8.60e-19!83;UBERON:0009618!8.60e-19!83;UBERON:0007285!8.60e-19!83;UBERON:0004290!4.51e-17!70;UBERON:0002049!9.88e-17!79;UBERON:0007798!9.88e-17!79;UBERON:0005256!5.52e-15!143;UBERON:0000486!1.29e-14!82;UBERON:0000490!1.29e-13!138;UBERON:0000055!2.00e-13!69;UBERON:0001134!4.33e-13!61;UBERON:0002036!4.33e-13!61;UBERON:0003082!4.33e-13!61;UBERON:0004872!4.81e-13!84;UBERON:0004535!5.01e-13!110;UBERON:0002385!9.15e-13!63;UBERON:0001015!9.15e-13!63;UBERON:0000383!9.15e-13!63;UBERON:0001009!1.83e-12!113;UBERON:0001981!8.34e-11!60;UBERON:0007500!8.34e-11!60;UBERON:0004537!8.34e-11!60;UBERON:0006965!8.34e-11!60;UBERON:0003914!2.82e-10!118;UBERON:0002100!3.12e-10!216;UBERON:0000475!2.58e-09!365;UBERON:0003102!1.02e-08!95;UBERON:0001637!2.41e-08!42;UBERON:0003509!2.41e-08!42;UBERON:0004572!2.41e-08!42;UBERON:0002199!3.35e-08!45;UBERON:0002416!3.35e-08!45;UBERON:0002097!1.11e-07!40;UBERON:0000481!4.45e-07!347;UBERON:0004573!4.86e-07!33;UBERON:0004571!4.86e-07!33;UBERON:0003104!6.13e-07!238;UBERON:0009142!6.13e-07!238;UBERON:0000477!6.71e-07!286;UBERON:0000119!9.53e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;3.67e-10;198!UBERON:0002097;3.98e-09;41!UBERON:0002199;2.87e-08;46!UBERON:0002416;2.87e-08;46!UBERON:0002204;6.32e-08;70!UBERON:0003102;2.25e-07;50!UBERON:0002067;3.29e-07;9!UBERON:0001637;4.69e-07;42!UBERON:0003509;4.69e-07;42!UBERON:0004572;4.69e-07;42!UBERON:0002049;5.23e-07;75!UBERON:0007798;5.23e-07;75!UBERON:0004573;6.10e-07;33!UBERON:0004571;6.10e-07;33 | |||
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|phase1_expression=4.36028110249336,5.35251309727458,5.49722175974288,1.0007329835313,3.12872766099101,10.4680622892044,0,6.94891860769514,1.30592814099919,0.982935746006035,0,0.873765488520689,0.791300934685361,5.44571953024205,12.2617029019329,0.672325146451775,1.20538905604795,2.92124036154949,1.46379839637152,2.21617904538218,7.34402488479311,1.88072832886853,0.286235987131057,0.684372125364421,2.00868223351684,0,0.0821005894499457,0,0.393364276848904,0,0.309632246632152,0.919421224478927,0.90361775633475,0,0.0774672005803016,0.142169232487422,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0.290796477559129,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0.422510572623884,0,0,0.22465726229299,0.150176892841506,0,0,0.19891667719909,0.182664153764634,1.75996244461323,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.526768169550154,0,0,0.411202997999018,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0.25618263945135,0,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0.150575119077773,0.383959833463255,0,0,0.821127996921047,0.403213486449465,0,0,2.43806866313962,0.670700859703636,2.04580098949649,8.31310050484502,8.02140657017423,4.92478164466801,0,2.43317435151318,1.70162670895322,1.55210578223795,3.24988707064566,0.392937226493138,0.728590576585084,0,0,0.174129737299267,0,0,0,0,2.98143611050058,1.72046919021225,3.47140501607594,1.69592382577203,1.67799774483962,0.550236083880135,4.38889429727302,4.90991842421725,4.62496141492723,5.69025041699939,3.62546385398232,0.760272105718513,2.19655851793353,2.20597848207521,0,1.69669483739752,1.79623498100936,0.675668882899933,3.06633274931766,2.84779697870439,1.28241220751285,0,0,0.436094052142534,5.96366342034382,3.92554586160197,4.76673050927588,10.3261183469573,4.965357350777,2.24271040056923,2.1349799145941,4.9333509683432,7.46906484959439,2.55950276932407,1.63461903113459,6.05429710579726,3.45705554687999,2.10889288650417,5.93104145977609,3.4228309292667,6.42629326372745,5.04968344168189,8.41739310714284,9.5506548557529,6.94124182266637,2.82518929817066,3.30642499762449,7.12801714369232,1.97813543422845,11.8320977051943,5.74894513452991,1.17835279767846,3.62843707628696,9.42017992646222,7.46261955497424,8.88814607817157,4.05642759047811,1.13432183160021,13.2748330409758,4.91181994282705,7.62954844174423,17.7053746689797,8.03809728059823,5.66809188100384,7.44467425326359,10.6329089311998,4.67697624773753,8.58274832429989,5.89119351310716,2.90962902273861,18.8155084033806,7.85866366175594,4.91725717700414,0.57978255948989,0.818238361772504,0.860413786167011,0,0.265059536642971,0.116193942869518,0.10366105501537,0,0,17.2094485562798,7.71889125831462,1.38134921352481,2.3218396401599,14.4375896333917,0.591534000199219,0.168584690078102,0.241011029883482,0.882351781859152,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,2.21446636387394,2.80483547606892,4.5273141246454,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0.614942192715568,1.02940686179115,0,0,0,0.555530670951178,1.3032332212413,6.23960871167747,1.44331342025273,0.579652024875384,1.87853910777315,1.44366447761074,1.38895653772983,0.761016608938393,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.335964256397719,0.283550194484773,0.179117045405697,0,0,0,0.088048434013226,0,0.288239906833923,0.12624243342638,0.190493682876507,0.381988425558278,0,1.71072446022705,1.02827492703324,0.300343057843917,0,13.3435990370979,7.84728123899904,5.79372457985505,1.80980402060889,3.57656445851882,4.22651376278,4.5209479819428,4.16029747645464,7.20180647933998,7.09245660116391,7.99266537048298,2.28764789853036,2.71310802695722,0.823240336780769,2.93162565864362,3.19852753868291,1.58390374586686,3.01439377059586,0,1.3996218765488,1.2162378064119,0.502257091432126,0,4.79249710983165,11.4861935834114,1.42636905040718,6.37037749337349,9.65738715986802,5.19276793395697,0,0.394061520403854,0.215627574859517,0.256686072559497,1.01637849688985,0,0,0.167516265334349,0,0,0,0,6.25726607767613,11.5039219843726,13.8345162086865,6.23912584592421,13.0253161821928,6.93890626149313,8.19989904948992,6.01892199455438,6.82222512167955,4.1389228517002,1.99267679560631,4.60922921354258,2.43274120510632,15.859893754482,8.23544217146054,0.206768026122887,0.215714200818617,0,0,0,0.604780586659361,3.72161711728165,5.67809301165831,4.2099014164961,4.99742682097234,3.07024349440022,6.11244900345709,4.45254199334973,4.1636617326717,2.66342587969691,3.12083192852475,0.519254429183621,4.76462551685833,0.483437798366489,1.00253235151642,0,0.918515585316854,1.45672934405374,1.18011973463482,0,0.0770153371044148,0,0,0.316654886678627,2.27466768141793,2.72149928442425,0.431831832204279,1.54227252690289,1.62567862526312,0.501689773854853,0.254876273045038,0,0,0,0,0.512900250232778,0.656029291399411,0,0.824328093181778,3.66277859273374,2.06273749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| ||
|short_description=p3@TRAM2 | |short_description=p3@TRAM2 | ||
}} | }} |
Latest revision as of 06:14, 19 September 2015
Short description: | p3@TRAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRAM2_5end |
Coexpression cluster: | C4613_pleomorphic_Fibroblast_mesodermal_Nucleus_Smooth_thyroid_hepatic |
Association with transcript: | 57bp_to_NM_012288, uc003paq.2_5end |
EntrezGene: | TRAM2 |
HGNC: | 16855 |
UniProt: | Q15035 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.92e-36 | 76 |
mesodermal cell | 2.04e-19 | 121 |
multi fate stem cell | 4.27e-19 | 427 |
somatic stem cell | 5.69e-18 | 433 |
skin fibroblast | 3.47e-17 | 23 |
stem cell | 1.54e-16 | 441 |
muscle precursor cell | 1.68e-15 | 58 |
myoblast | 1.68e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.68e-15 | 58 |
muscle cell | 1.08e-13 | 55 |
smooth muscle cell | 6.23e-11 | 43 |
smooth muscle myoblast | 6.23e-11 | 43 |
electrically responsive cell | 6.84e-11 | 61 |
electrically active cell | 6.84e-11 | 61 |
connective tissue cell | 1.71e-09 | 361 |
embryonic cell | 1.10e-08 | 250 |
vascular associated smooth muscle cell | 1.92e-07 | 32 |
motile cell | 1.94e-07 | 386 |
mesenchymal cell | 2.51e-07 | 354 |