FFCP PHASE1:Hg19::chr6:48078876..48078948,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=442213 | |EntrezGene=442213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21345 | |HGNC=21345 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc011dwn.1_5end | |association_with_transcript=0bp_to_uc011dwn.1_5end | ||
|cluster_id=chr6:48078876..48078948,- | |||
|description=CAGE_peak_1_at_C6orf138_5end | |description=CAGE_peak_1_at_C6orf138_5end | ||
|id=chr6:48078876..48078948,- | |id=chr6:48078876..48078948,- | ||
|ontology_enrichment_celltype=CL:0002321!5.04e-24!248;CL:0000220!1.82e-23!246;CL:0002139!3.00e-13!24;CL:0000222!3.27e-13!119;CL:0000066!8.01e-12!254;CL:0000055!9.22e-12!180;CL:0000213!3.47e-10!57;CL:0000215!3.47e-10!57;CL:0000221!1.28e-09!71;CL:0000071!1.49e-09!18;CL:0002546!1.49e-09!18;CL:0000115!2.89e-09!35;CL:0000076!9.31e-09!62;CL:0000133!4.57e-08!59;CL:0002078!5.30e-08!44 | |ontology_enrichment_celltype=CL:0002321!5.04e-24!248;CL:0000220!1.82e-23!246;CL:0002139!3.00e-13!24;CL:0000222!3.27e-13!119;CL:0000066!8.01e-12!254;CL:0000055!9.22e-12!180;CL:0000213!3.47e-10!57;CL:0000215!3.47e-10!57;CL:0000221!1.28e-09!71;CL:0000071!1.49e-09!18;CL:0002546!1.49e-09!18;CL:0000115!2.89e-09!35;CL:0000076!9.31e-09!62;CL:0000133!4.57e-08!59;CL:0002078!5.30e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.24e-14;24!CL:0000071;5.80e-10;18!CL:0000115;1.08e-08;36!CL:0000213;7.48e-07;58!CL:0000215;7.48e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.66e-23,250;CL:0002139,7.35e-14,24;CL:0000222,1.64e-12,121;CL:0000066,1.21e-11,253;CL:0000213,6.93e-11,58;CL:0000215,6.93e-11,58;CL:0000115,4.40e-10,36;CL:0000071,5.69e-10,18;CL:0002546,5.69e-10,18;CL:0000221,1.61e-09,72;CL:0000076,6.03e-09,63;CL:0002078,9.24e-08,45;CL:0000133,9.52e-08,59 | |||
|ontology_enrichment_development_v019=CL:0002546;5.80e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.59e-17!79;UBERON:0007798!9.59e-17!79;UBERON:0000055!1.41e-14!69;UBERON:0000475!4.71e-12!365;UBERON:0000483!4.80e-12!309;UBERON:0000119!1.25e-11!312;UBERON:0001981!1.54e-11!60;UBERON:0007500!1.54e-11!60;UBERON:0004537!1.54e-11!60;UBERON:0006965!1.54e-11!60;UBERON:0004872!5.58e-11!84;UBERON:0001009!1.50e-10!113;UBERON:0004535!1.64e-10!110;UBERON:0004111!2.07e-10!241;UBERON:0000468!1.37e-09!659;UBERON:0001986!1.49e-09!18;UBERON:0004638!1.49e-09!18;UBERON:0004852!1.49e-09!18;UBERON:0000480!3.74e-09!626;UBERON:0000467!3.82e-09!625;UBERON:0000487!5.53e-09!22;UBERON:0003914!7.94e-09!118;UBERON:0000477!1.04e-08!286;UBERON:0006914!5.47e-08!25;UBERON:0004121!1.72e-07!169;UBERON:0000025!2.61e-07!194;UBERON:0000947!3.01e-07!21;UBERON:0010191!3.01e-07!21 | |ontology_enrichment_uberon=UBERON:0002049!9.59e-17!79;UBERON:0007798!9.59e-17!79;UBERON:0000055!1.41e-14!69;UBERON:0000475!4.71e-12!365;UBERON:0000483!4.80e-12!309;UBERON:0000119!1.25e-11!312;UBERON:0001981!1.54e-11!60;UBERON:0007500!1.54e-11!60;UBERON:0004537!1.54e-11!60;UBERON:0006965!1.54e-11!60;UBERON:0004872!5.58e-11!84;UBERON:0001009!1.50e-10!113;UBERON:0004535!1.64e-10!110;UBERON:0004111!2.07e-10!241;UBERON:0000468!1.37e-09!659;UBERON:0001986!1.49e-09!18;UBERON:0004638!1.49e-09!18;UBERON:0004852!1.49e-09!18;UBERON:0000480!3.74e-09!626;UBERON:0000467!3.82e-09!625;UBERON:0000487!5.53e-09!22;UBERON:0003914!7.94e-09!118;UBERON:0000477!1.04e-08!286;UBERON:0006914!5.47e-08!25;UBERON:0004121!1.72e-07!169;UBERON:0000025!2.61e-07!194;UBERON:0000947!3.01e-07!21;UBERON:0010191!3.01e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.80e-10;18!UBERON:0001986;5.80e-10;18!UBERON:0004852;5.80e-10;18!UBERON:0000487;2.76e-09;22!UBERON:0006914;7.83e-08;25!UBERON:0000947;1.39e-07;21!UBERON:0010191;1.39e-07;21!UBERON:0002049;3.11e-07;75!UBERON:0007798;3.11e-07;75!UBERON:0000055;3.90e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.22e-16,78;UBERON:0007798,2.22e-16,78;UBERON:0000055,4.94e-14,68;UBERON:0007500,6.54e-11,59;UBERON:0001981,6.54e-11,59;UBERON:0004537,6.54e-11,59;UBERON:0006965,6.54e-11,59;UBERON:0001009,1.63e-10,112;UBERON:0004535,1.79e-10,109;UBERON:0004638,5.69e-10,18;UBERON:0001986,5.69e-10,18;UBERON:0004852,5.69e-10,18;UBERON:0004872,1.20e-09,83;UBERON:0000487,2.26e-09,22;UBERON:0000483,3.45e-09,306;UBERON:0000119,9.52e-09,309;UBERON:0006914,5.47e-08,25;UBERON:0003914,6.18e-08,117;UBERON:0004111,7.04e-08,240;UBERON:0000947,1.51e-07,21;UBERON:0010191,1.51e-07,21 | |||
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|phase1_expression=15.6243406172679,5.99481466894753,8.73917305395021,3.00219895059391,10.7270662662549,7.85104671690332,0,8.2123583545488,2.35067065379855,1.47440361900905,0.697801167972428,3.71350332621293,3.9565046734268,4.20805600064159,1.98838425436749,38.3225333477512,47.6128677138942,46.0095356944045,33.667363116545,4.92484232307152,3.4680117511523,1.88072832886853,21.1814630476982,11.2237028559765,7.03038781730896,0.916960868975415,1.64201178899891,1.65292640758726,0,0,0.309632246632152,2.75826367343678,2.409647350226,4.43704812200145,1.47187681102573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.40648818027883,0.722878304769133,0.50133791063589,1.01392563272577,0.795285947051099,0.486634870302636,19.568707152962,17.9600811944677,17.6547919243183,2.75056058545197,4.37154345951051,6.3033355273353,0,0,0.664789802594326,0,0,0,8.54678351676832,17.2046919021225,20.8284300964557,11.3061588384802,21.3944712467052,17.8826727261044,6.47884396264113,97.9399517251756,130.210452143336,140.582657361161,35.0461505884958,23.5684352772739,38.0736809775144,14.3388601334889,34.0259618110339,35.5412918570637,17.7378204374674,12.8377087750987,15.3316637465883,20.8838445104988,19.9689900884144,0,0,6.54141078213801,3.97577561356255,3.79891534993739,31.6457942143593,13.7681577959431,1.41867352879343,4.48542080113846,2.1349799145941,5.92002116201184,6.84664277879486,5.11900553864815,0.326923806226917,6.50836938873205,5.18558332031999,1.87457145467037,2.80944069147288,9.69802096625564,2.24173020827702,1.996386476944,0.485618833104395,0.280901613404497,5.9204709663919,1.84251475967652,4.23635702820638,7.12801714369232,1.23633464639278,3.64064544775211,5.03032699271367,1.5150250255866,1.00094815897571,7.48073111807294,1.31693286264251,3.0648779579902,1.20190447125277,2.94923676216055,8.79009214875424,12.5998859402955,2.11931901159562,2.10063767259082,3.91599611106068,14.1702297025096,13.5865305122061,3.88185564154912,2.04617710838517,3.02920529092937,5.70709371582256,7.43571861366535,17.3954700333141,7.55640736707302,1.18692414617341,5.9910864480622,6.81865301477087,9.46455164783713,13.2951339681259,5.96383957446684,7.43641234364918,21.4578383881817,5.80337957013945,0.36497735907583,6.25798129319264,14.7945415784364,2.76269842704961,3.25057549622385,5.77503585335668,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.269662616320329,0.196221465125346,0,19.9301972748655,7.01208869017229,1.6462960453256,0,0,0,0.590789906681404,0,0,13.0391535826879,6.03626569747441,8.99214026060957,2.01057944823262,25.5544108637542,2.6064664424826,2.07986957055916,10.1031939417691,15.7665350766104,31.7003474436718,33.4930158805691,25.001217679137,25.113548094967,0,0,0,0,0,1.87467667973554,8.39910640994298,9.92425680696705,12.7173102238045,17.4380363108377,2.30029607499127,4.92663237895944,2.72950145441001,0,0,0.12624243342638,0.698476837213859,9.54971063895694,7.03304683260282,3.4214489204541,4.62723717164956,16.5188681814155,71.170781725014,0.784917590417525,0,1.0267360014933,10.2124655448644,14.3062578340753,0.845302752556,3.45719551560332,1.04007436911366,1.54324424557285,1.41849132023278,0.799266537048298,2.00169191121407,3.25572963234866,4.93944202068461,1.62868092146868,2.48774364119782,3.16780749173372,37.6799221324483,39.2190056370132,29.0921404339786,0,0,0,0.718874566474748,0,27.1010119577365,6.22559618670591,3.6985738059069,26.6800835227444,0,0,0,0,48.277978602268,5.20559415430487,0.773288812777695,2.68026024534958,3.18969375826582,0,0,0,1.10422342547226,1.00034104211935,5.15403545029498,1.45579603071565,3.21172179834891,6.30809660135739,4.68565659970853,13.2416283880196,4.5481500811197,2.0694614258501,0.664225598535437,1.65932251687533,29.2797780757439,0.587403472388222,0,0,0,0,2.12189300012382,34.9514422972044,11.7932214398575,15.3826840847642,8.44040853084343,5.61320188866147,7.04765320906355,8.18731598506726,6.75586468803151,4.45254199334973,0.462629081407967,2.84098760501003,3.20295908453856,5.19254429183621,1.16210378459959,0,7.81975234182811,8.74769394891015,0.459257792658427,1.63882051206045,0.786746489756545,4.51199612907412,8.62571775569445,2.35304930753057,2.92278449306521,17.5215703962174,2.27466768141793,10.3757160218675,7.34114114747274,6.16909010761157,2.70946437543853,1.50506932156456,0.764628819135115,0.831076008928724,2.46262230194396,0,0,10.0015548795392,5.576248976895,6.18218949862176,7.62503486193145,0,0.330037999682352,2.87132768998086,4.55042172225565,1.6068392984416,2.32009723901093,2.31072925671967,1.84204409671355,0.413509717453592,12.6755888944563,3.91545073568417,1.96021243057032,1.60257664164127,12.5616535674343,4.99694175149276,76.0571766467721,9.00304249614394,6.507837690162,19.5183655034997,5.5762981612848,2.46426864140871,2.12922412126809,4.34966496037536,5.74505079222152,9.8756171851974,6.32669227911434,8.858623892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| ||
|short_description=p1@C6orf138 | |short_description=p1@C6orf138 | ||
}} | }} |
Latest revision as of 04:20, 19 September 2015
Short description: | p1@C6orf138 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C6orf138_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc011dwn.1_5end |
EntrezGene: | C6orf138 |
HGNC: | 21345 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.66e-23 | 250 |
endothelial cell of vascular tree | 7.35e-14 | 24 |
mesodermal cell | 1.64e-12 | 121 |
epithelial cell | 1.21e-11 | 253 |
lining cell | 6.93e-11 | 58 |
barrier cell | 6.93e-11 | 58 |
endothelial cell | 4.40e-10 | 36 |
blood vessel endothelial cell | 5.69e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.69e-10 | 18 |
ectodermal cell | 1.61e-09 | 72 |
squamous epithelial cell | 6.03e-09 | 63 |
meso-epithelial cell | 9.24e-08 | 45 |
neurectodermal cell | 9.52e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.22e-16 | 78 |
vascular system | 2.22e-16 | 78 |
vessel | 4.94e-14 | 68 |
epithelial tube open at both ends | 6.54e-11 | 59 |
blood vessel | 6.54e-11 | 59 |
blood vasculature | 6.54e-11 | 59 |
vascular cord | 6.54e-11 | 59 |
circulatory system | 1.63e-10 | 112 |
cardiovascular system | 1.79e-10 | 109 |
blood vessel endothelium | 5.69e-10 | 18 |
endothelium | 5.69e-10 | 18 |
cardiovascular system endothelium | 5.69e-10 | 18 |
splanchnic layer of lateral plate mesoderm | 1.20e-09 | 83 |
simple squamous epithelium | 2.26e-09 | 22 |
epithelium | 3.45e-09 | 306 |
cell layer | 9.52e-09 | 309 |
squamous epithelium | 5.47e-08 | 25 |
epithelial tube | 6.18e-08 | 117 |
anatomical conduit | 7.04e-08 | 240 |
aorta | 1.51e-07 | 21 |
aortic system | 1.51e-07 | 21 |