FFCP PHASE1:Hg19::chr6:41562324..41562340,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116113 | |EntrezGene=116113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20842 | |HGNC=20842 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVH2 | |UniProt=Q8IVH2 | ||
|association_with_transcript=-310bp_to_BC013030_5end | |association_with_transcript=-310bp_to_BC013030_5end | ||
|cluster_id=chr6:41562324..41562340,+ | |||
|description=CAGE_peak_16_at_FOXP4_5end | |description=CAGE_peak_16_at_FOXP4_5end | ||
|id=chr6:41562324..41562340,+ | |id=chr6:41562324..41562340,+ | ||
|ontology_enrichment_celltype=CL:0002620!7.70e-20!23;CL:0000057!3.49e-13!75;CL:0002570!8.42e-13!8;CL:0002551!7.50e-10!6;CL:0002550!6.59e-08!1;CL:0002574!2.35e-07!1 | |ontology_enrichment_celltype=CL:0002620!7.70e-20!23;CL:0000057!3.49e-13!75;CL:0002570!8.42e-13!8;CL:0002551!7.50e-10!6;CL:0002550!6.59e-08!1;CL:0002574!2.35e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002550;6.62e-41;1!CL:0002367;3.81e-21;2!CL:0002363;4.66e-21;2!CL:0002552;3.35e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002550,6.62e-41,1;CL:0002367,3.81e-21,2;CL:0002363,4.66e-21,2;CL:0000008,4.66e-21,2;CL:0002552,3.49e-09,5 | |||
|ontology_enrichment_development_v019=CL:0000008;4.66e-21;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!9.68e-12!45;UBERON:0002416!9.68e-12!45;UBERON:0003102!2.54e-11!95;UBERON:0002097!8.57e-11!40;UBERON:0001013!2.37e-07!14 | |ontology_enrichment_uberon=UBERON:0002199!9.68e-12!45;UBERON:0002416!9.68e-12!45;UBERON:0003102!2.54e-11!95;UBERON:0002097!8.57e-11!40;UBERON:0001013!2.37e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0005969;3.81e-21;2!UBERON:0003956;3.81e-21;2!UBERON:0003566;4.66e-21;2!UBERON:0001777;4.66e-21;2!UBERON:0001801;2.24e-12;14!UBERON:0003891;3.10e-11;4!UBERON:0000964;3.10e-11;4!UBERON:0010409;3.10e-11;4!UBERON:0000019;2.17e-09;19!UBERON:0000047;2.17e-09;19!UBERON:0004088;2.17e-09;19!UBERON:0010230;2.17e-09;19!UBERON:0000970;5.70e-09;20!UBERON:0002104;1.37e-08;21!UBERON:0001456;1.37e-08;21!UBERON:0002203;5.92e-08;6!UBERON:0001768;5.92e-08;6!UBERON:0002200;5.92e-08;6!UBERON:0000020;6.29e-08;23!UBERON:0001032;1.23e-07;24!UBERON:0004456;1.23e-07;24!UBERON:0007811;4.76e-07;52!UBERON:0000153;6.80e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,3.81e-21,2;UBERON:0003956,3.81e-21,2;UBERON:0003566,4.66e-21,2;UBERON:0001777,4.66e-21,2;UBERON:0001801,2.24e-12,14;UBERON:0003891,3.10e-11,4;UBERON:0000964,3.10e-11,4;UBERON:0010409,3.10e-11,4;UBERON:0004348,3.10e-11,4;UBERON:0005427,3.10e-11,4;UBERON:0000019,5.70e-09,20;UBERON:0000047,5.70e-09,20;UBERON:0010312,5.70e-09,20;UBERON:0004088,5.70e-09,20;UBERON:0010230,5.70e-09,20;UBERON:0003072,5.70e-09,20;UBERON:0004128,5.70e-09,20;UBERON:0003071,5.70e-09,20;UBERON:0000970,1.37e-08,21;UBERON:0002104,1.37e-08,21;UBERON:0001456,3.04e-08,22;UBERON:0001444,4.54e-08,49;UBERON:0002203,5.92e-08,6;UBERON:0001768,5.92e-08,6;UBERON:0002200,5.92e-08,6;UBERON:0000020,1.23e-07,24;UBERON:0001032,1.23e-07,24;UBERON:0004456,1.23e-07,24;UBERON:0000033,3.76e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1978217515459,0,0,0,0.822041490506354,0.323745888736263,0.140450806702248,0,0,1.34323515528495,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9096996637239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19921664293979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,1.63599316893057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1978217515459,0,0,0,0.822041490506354,0.323745888736263,0.140450806702248,0,0,1.34323515528495,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9096996637239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19921664293979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,1.63599316893057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@FOXP4 | |short_description=p16@FOXP4 | ||
}} | }} |
Latest revision as of 18:43, 18 September 2015
Short description: | p16@FOXP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_FOXP4_5end |
Coexpression cluster: | NA |
Association with transcript: | -310bp_to_BC013030_5end |
EntrezGene: | FOXP4 |
HGNC: | 20842 |
UniProt: | Q8IVH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of the conjuctiva | 6.62e-41 | 1 |
trabecular meshwork cell | 3.81e-21 | 2 |
keratocyte | 4.66e-21 | 2 |
migratory cranial neural crest cell | 4.66e-21 | 2 |
fibroblast of gingiva | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 3.81e-21 | 2 |
aqueous drainage system | 3.81e-21 | 2 |
head connective tissue | 4.66e-21 | 2 |
substantia propria of cornea | 4.66e-21 | 2 |
anterior segment of eyeball | 2.24e-12 | 14 |
stroma | 3.10e-11 | 4 |
cornea | 3.10e-11 | 4 |
eye surface | 3.10e-11 | 4 |
optic eminence | 3.10e-11 | 4 |
corneal primordium | 3.10e-11 | 4 |
camera-type eye | 5.70e-09 | 20 |
simple eye | 5.70e-09 | 20 |
immature eye | 5.70e-09 | 20 |
ocular region | 5.70e-09 | 20 |
eyeball of camera-type eye | 5.70e-09 | 20 |
optic cup | 5.70e-09 | 20 |
optic vesicle | 5.70e-09 | 20 |
eye primordium | 5.70e-09 | 20 |
eye | 1.37e-08 | 21 |
visual system | 1.37e-08 | 21 |
face | 3.04e-08 | 22 |
subdivision of head | 4.54e-08 | 49 |
vasculature of eye | 5.92e-08 | 6 |
uvea | 5.92e-08 | 6 |
vasculature of head | 5.92e-08 | 6 |
sense organ | 1.23e-07 | 24 |
sensory system | 1.23e-07 | 24 |
entire sense organ system | 1.23e-07 | 24 |
head | 3.76e-07 | 56 |