FFCP PHASE1:Hg19::chr6:4021554..4021656,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8899 | |EntrezGene=8899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17346 | |HGNC=17346 | ||
|TSSclassifier=strong | |||
|UniProt=Q13523 | |UniProt=Q13523 | ||
|association_with_transcript=0bp_to_ENST00000337659,NM_003913,uc003mvv.2_5end | |association_with_transcript=0bp_to_ENST00000337659,NM_003913,uc003mvv.2_5end | ||
|cluster_id=chr6:4021554..4021656,+ | |||
|coexpression_cluster_id=C3037 | |||
|description=CAGE_peak_1_at_PRPF4B_5end | |description=CAGE_peak_1_at_PRPF4B_5end | ||
|id=chr6:4021554..4021656,+ | |id=chr6:4021554..4021656,+ | ||
|ontology_enrichment_celltype=CL:0000763!3.91e-14!112;CL:0000049!3.91e-14!112;CL:0000860!1.21e-11!45;CL:0002057!1.76e-11!42;CL:0000557!1.06e-10!71;CL:0000839!2.06e-10!70;CL:0002009!1.15e-09!65;CL:0002194!1.49e-09!63;CL:0000576!1.49e-09!63;CL:0000040!1.49e-09!63;CL:0000559!1.49e-09!63;CL:0000037!3.82e-09!172;CL:0000566!3.82e-09!172;CL:0002032!7.86e-09!165;CL:0000837!7.86e-09!165;CL:0000766!1.85e-08!76;CL:0000988!1.11e-07!182 | |ontology_enrichment_celltype=CL:0000763!3.91e-14!112;CL:0000049!3.91e-14!112;CL:0000860!1.21e-11!45;CL:0002057!1.76e-11!42;CL:0000557!1.06e-10!71;CL:0000839!2.06e-10!70;CL:0002009!1.15e-09!65;CL:0002194!1.49e-09!63;CL:0000576!1.49e-09!63;CL:0000040!1.49e-09!63;CL:0000559!1.49e-09!63;CL:0000037!3.82e-09!172;CL:0000566!3.82e-09!172;CL:0002032!7.86e-09!165;CL:0000837!7.86e-09!165;CL:0000766!1.85e-08!76;CL:0000988!1.11e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.72e-12;33!CL:0002057;2.72e-12;33!CL:0000473;8.46e-09;39!CL:0000234;8.46e-09;39!CL:0000576;1.04e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.62e-14,108;CL:0000049,9.62e-14,108;CL:0000860,1.76e-11,42;CL:0002057,1.76e-11,42;CL:0000557,2.33e-10,67;CL:0000839,4.55e-10,66;CL:0000473,4.68e-10,48;CL:0000234,4.68e-10,48;CL:0002009,2.52e-09,61;CL:0002194,3.23e-09,59;CL:0000576,3.23e-09,59;CL:0000040,3.23e-09,59;CL:0000559,3.23e-09,59;CL:0000037,8.97e-09,168;CL:0002032,1.83e-08,161;CL:0000837,1.83e-08,161;CL:0000766,4.21e-08,72;CL:0000988,1.23e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-08;42 | |||
|ontology_enrichment_disease=DOID:162!4.94e-17!235;DOID:14566!3.34e-16!239;DOID:0050686!3.40e-09!137;DOID:0050687!4.05e-09!143;DOID:1240!4.98e-08!39;DOID:2531!1.18e-07!51;DOID:0060083!1.18e-07!51;DOID:8692!1.75e-07!31 | |ontology_enrichment_disease=DOID:162!4.94e-17!235;DOID:14566!3.34e-16!239;DOID:0050686!3.40e-09!137;DOID:0050687!4.05e-09!143;DOID:1240!4.98e-08!39;DOID:2531!1.18e-07!51;DOID:0060083!1.18e-07!51;DOID:8692!1.75e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.29e-07;31!DOID:1240;9.31e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.94e-17,235;DOID:14566,3.34e-16,239;DOID:0050686,3.40e-09,137;DOID:0050687,4.05e-09,143;DOID:1240,4.98e-08,39;DOID:2531,1.18e-07,51;DOID:0060083,1.18e-07,51;DOID:8692,1.75e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.75e-09!94;UBERON:0001016!1.75e-09!94;UBERON:0001474!2.40e-09!86;UBERON:0001017!3.67e-09!82;UBERON:0001049!2.01e-08!57;UBERON:0005068!2.01e-08!57;UBERON:0006241!2.01e-08!57;UBERON:0007135!2.01e-08!57;UBERON:0002371!2.37e-08!80;UBERON:0007023!3.18e-08!115;UBERON:0005743!9.46e-08!86;UBERON:0003080!1.13e-07!42;UBERON:0004765!1.49e-07!101;UBERON:0001434!1.49e-07!101;UBERON:0002780!1.61e-07!41;UBERON:0001890!1.61e-07!41;UBERON:0006240!1.61e-07!41;UBERON:0002390!2.43e-07!102;UBERON:0003061!2.43e-07!102;UBERON:0000955!4.84e-07!69;UBERON:0006238!4.84e-07!69 | |ontology_enrichment_uberon=UBERON:0000073!1.75e-09!94;UBERON:0001016!1.75e-09!94;UBERON:0001474!2.40e-09!86;UBERON:0001017!3.67e-09!82;UBERON:0001049!2.01e-08!57;UBERON:0005068!2.01e-08!57;UBERON:0006241!2.01e-08!57;UBERON:0007135!2.01e-08!57;UBERON:0002371!2.37e-08!80;UBERON:0007023!3.18e-08!115;UBERON:0005743!9.46e-08!86;UBERON:0003080!1.13e-07!42;UBERON:0004765!1.49e-07!101;UBERON:0001434!1.49e-07!101;UBERON:0002780!1.61e-07!41;UBERON:0001890!1.61e-07!41;UBERON:0006240!1.61e-07!41;UBERON:0002390!2.43e-07!102;UBERON:0003061!2.43e-07!102;UBERON:0000955!4.84e-07!69;UBERON:0006238!4.84e-07!69 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.58e-11,89;UBERON:0001017,5.25e-09,81;UBERON:0001474,5.55e-09,82;UBERON:0001049,2.88e-08,56;UBERON:0005068,2.88e-08,56;UBERON:0006241,2.88e-08,56;UBERON:0007135,2.88e-08,56;UBERON:0002371,5.43e-08,76;UBERON:0007023,6.52e-08,114;UBERON:0002780,1.61e-07,41;UBERON:0001890,1.61e-07,41;UBERON:0003080,1.61e-07,41;UBERON:0006240,1.61e-07,41;UBERON:0000073,2.21e-07,53;UBERON:0002616,2.21e-07,53;UBERON:0002390,5.48e-07,98;UBERON:0003061,5.48e-07,98;UBERON:0000955,6.80e-07,68;UBERON:0006238,6.80e-07,68;UBERON:0004765,6.88e-07,90 | |||
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| ||
|short_description=p1@PRPF4B | |short_description=p1@PRPF4B | ||
}} | }} |
Latest revision as of 17:24, 18 September 2015
Short description: | p1@PRPF4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRPF4B_5end |
Coexpression cluster: | C3037_Mast_acute_osteosarcoma_hepatoblastoma_lung_Myoblast_salivary |
Association with transcript: | 0bp_to_ENST00000337659, NM_003913, uc003mvv.2_5end |
EntrezGene: | PRPF4B |
HGNC: | 17346 |
UniProt: | Q13523 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.62e-14 | 108 |
common myeloid progenitor | 9.62e-14 | 108 |
classical monocyte | 1.76e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.76e-11 | 42 |
granulocyte monocyte progenitor cell | 2.33e-10 | 67 |
myeloid lineage restricted progenitor cell | 4.55e-10 | 66 |
defensive cell | 4.68e-10 | 48 |
phagocyte | 4.68e-10 | 48 |
macrophage dendritic cell progenitor | 2.52e-09 | 61 |
monopoietic cell | 3.23e-09 | 59 |
monocyte | 3.23e-09 | 59 |
monoblast | 3.23e-09 | 59 |
promonocyte | 3.23e-09 | 59 |
hematopoietic stem cell | 8.97e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.83e-08 | 161 |
myeloid leukocyte | 4.21e-08 | 72 |
hematopoietic cell | 1.23e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.58e-11 | 89 |
central nervous system | 5.25e-09 | 81 |
bone element | 5.55e-09 | 82 |
neural tube | 2.88e-08 | 56 |
neural rod | 2.88e-08 | 56 |
future spinal cord | 2.88e-08 | 56 |
neural keel | 2.88e-08 | 56 |
bone marrow | 5.43e-08 | 76 |
adult organism | 6.52e-08 | 114 |
regional part of forebrain | 1.61e-07 | 41 |
forebrain | 1.61e-07 | 41 |
anterior neural tube | 1.61e-07 | 41 |
future forebrain | 1.61e-07 | 41 |
regional part of nervous system | 2.21e-07 | 53 |
regional part of brain | 2.21e-07 | 53 |
hematopoietic system | 5.48e-07 | 98 |
blood island | 5.48e-07 | 98 |
brain | 6.80e-07 | 68 |
future brain | 6.80e-07 | 68 |
skeletal element | 6.88e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.94e-17 | 235 |
disease of cellular proliferation | 3.34e-16 | 239 |
organ system cancer | 3.40e-09 | 137 |
cell type cancer | 4.05e-09 | 143 |
leukemia | 4.98e-08 | 39 |
hematologic cancer | 1.18e-07 | 51 |
immune system cancer | 1.18e-07 | 51 |
myeloid leukemia | 1.75e-07 | 31 |