FFCP PHASE1:Hg19::chr16:55519282..55519295,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:55519282..55519295,+
|short_description=p@chr16:55519282..55519295,+
|description=CAGE_peak_at_chr16:55519282..55519295,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:55519282..55519295,+ | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55519282..55519295,+ | |||
|id=chr16:55519282..55519295,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.28e-32!180;CL:0000057!6.02e-18!75;CL:0000680!2.09e-16!57;CL:0000056!2.09e-16!57;CL:0000355!2.09e-16!57;CL:0000183!1.71e-15!59;CL:0000187!7.93e-15!54;CL:0000192!1.81e-14!42;CL:0000514!1.81e-14!42;CL:0000393!2.41e-13!60;CL:0000211!2.41e-13!60;CL:0000359!4.27e-11!32;CL:0000048!1.38e-10!430;CL:0000723!8.75e-10!436;CL:0002371!1.35e-09!591;CL:0000034!2.78e-09!444;CL:0000222!1.23e-08!119;CL:0000144!2.56e-08!625;CL:0002620!3.59e-07!23;CL:0002334!7.79e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.22e-13;32!CL:0000192;2.91e-12;43!CL:0000134;5.43e-12;55!CL:0000048;9.00e-12;58!CL:0000723;2.81e-10;61!CL:0002539;2.56e-09;10!CL:0000034;8.70e-09;69!CL:0002320;2.05e-08;188!CL:0002334;3.04e-08;12!CL:0000569;3.91e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.98e-20,427;CL:0000723,1.60e-19,433;CL:0000034,1.39e-18,441;CL:0000192,1.38e-16,43;CL:0000514,1.38e-16,43;CL:0000057,1.42e-14,76;CL:0000359,4.42e-13,32;CL:0000680,1.45e-12,58;CL:0000056,1.45e-12,58;CL:0000355,1.45e-12,58;CL:0000187,3.03e-11,55;CL:0000134,1.84e-10,354;CL:0002320,2.75e-10,361;CL:0002539,2.01e-09,10;CL:0000393,2.05e-09,61;CL:0000211,2.05e-09,61;CL:0002334,6.03e-08,12;CL:0000219,1.22e-07,386;CL:0000136,3.51e-07,15;CL:0000569,4.17e-07,4;CL:0000011,4.17e-07,4;CL:0002620,9.82e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;2.91e-12;43!CL:0000011;3.91e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!9.03e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.26e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.90e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.19e-17!83;UBERON:0002329!2.19e-17!83;UBERON:0003077!2.19e-17!83;UBERON:0003059!2.19e-17!83;UBERON:0007282!2.19e-17!83;UBERON:0009618!2.19e-17!83;UBERON:0007285!2.19e-17!83;UBERON:0004290!1.19e-15!70;UBERON:0002385!3.97e-15!63;UBERON:0001015!3.97e-15!63;UBERON:0000383!3.97e-15!63;UBERON:0001637!6.27e-15!42;UBERON:0003509!6.27e-15!42;UBERON:0004572!6.27e-15!42;UBERON:0001134!8.12e-15!61;UBERON:0002036!8.12e-15!61;UBERON:0003082!8.12e-15!61;UBERON:0000486!2.97e-13!82;UBERON:0005256!4.50e-13!143;UBERON:0001981!2.02e-11!60;UBERON:0007500!2.02e-11!60;UBERON:0004537!2.02e-11!60;UBERON:0006965!2.02e-11!60;UBERON:0004872!2.03e-11!84;UBERON:0004573!4.39e-11!33;UBERON:0004571!4.39e-11!33;UBERON:0002049!5.11e-11!79;UBERON:0007798!5.11e-11!79;UBERON:0002100!1.86e-10!216;UBERON:0000055!9.53e-10!69;UBERON:0001009!4.54e-09!113;UBERON:0004535!8.93e-09!110;UBERON:0003914!9.00e-09!118;UBERON:0000490!2.58e-08!138;UBERON:0000475!3.24e-08!365;UBERON:0003102!4.83e-08!95;UBERON:0001135!1.50e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.22e-13;33!UBERON:0004571;4.22e-13;33!UBERON:0001637;1.03e-11;42!UBERON:0003509;1.03e-11;42!UBERON:0004572;1.03e-11;42!UBERON:0000947;5.03e-11;21!UBERON:0010191;5.03e-11;21!UBERON:0004457;1.99e-10;9!UBERON:0000042;1.99e-10;9!UBERON:0001135;4.97e-10;15!UBERON:0004237;2.56e-09;10!UBERON:0004695;2.56e-09;10!UBERON:0002111;2.56e-09;10!UBERON:0004178;2.56e-09;10!UBERON:0003688;5.56e-09;6!UBERON:0002358;5.56e-09;6!UBERON:0003684;5.56e-09;6!UBERON:0001178;5.56e-09;6!UBERON:0002384;3.40e-08;198!UBERON:0000992;7.27e-08;13!UBERON:0002118;8.13e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.02e-16,42;UBERON:0003509,4.02e-16,42;UBERON:0004572,4.02e-16,42;UBERON:0004573,2.06e-14,33;UBERON:0004571,2.06e-14,33;UBERON:0007524,5.23e-12,73;UBERON:0002329,1.63e-11,71;UBERON:0003059,1.63e-11,71;UBERON:0007282,1.63e-11,71;UBERON:0004290,1.63e-11,71;UBERON:0009618,1.63e-11,71;UBERON:0003077,3.13e-11,72;UBERON:0007285,3.13e-11,72;UBERON:0001134,3.18e-11,62;UBERON:0002036,3.18e-11,62;UBERON:0003082,3.18e-11,62;UBERON:0000947,3.87e-11,21;UBERON:0010191,3.87e-11,21;UBERON:0002385,1.27e-10,64;UBERON:0001015,1.27e-10,64;UBERON:0000383,1.27e-10,64;UBERON:0000486,1.88e-10,83;UBERON:0007503,1.95e-10,78;UBERON:0001135,2.11e-10,15;UBERON:0007500,3.94e-10,59;UBERON:0001981,3.94e-10,59;UBERON:0004537,3.94e-10,59;UBERON:0006965,3.94e-10,59;UBERON:0002384,7.47e-10,371;UBERON:0004237,2.01e-09,10;UBERON:0004695,2.01e-09,10;UBERON:0002111,2.01e-09,10;UBERON:0004178,2.01e-09,10;UBERON:0003688,5.91e-09,6;UBERON:0002358,5.91e-09,6;UBERON:0003684,5.91e-09,6;UBERON:0001178,5.91e-09,6;UBERON:0004872,6.79e-09,83;UBERON:0000926,7.26e-09,315;UBERON:0004120,7.26e-09,315;UBERON:0006603,7.26e-09,315;UBERON:0005256,2.34e-08,122;UBERON:0002199,2.39e-08,46;UBERON:0002416,2.39e-08,46;UBERON:0000055,7.57e-08,68;UBERON:0000992,7.92e-08,13;UBERON:0002118,1.13e-07,5;UBERON:0004457,2.44e-07,12;UBERON:0000042,2.44e-07,12;UBERON:0003102,3.13e-07,99;UBERON:0002097,3.97e-07,41;UBERON:0003914,5.28e-07,117 | |||
|phase1_expression=1.81678379270557,7.27941781229343,1.9733616573436,6.00439790118782,8.93922188854576,2.61701557230111,0,0.631719873426831,3.3954131665979,0,0,0,0,0.74259811776028,0.331397375727916,12.101852636132,7.23233433628772,10.9546513558106,7.3189919818576,0.246242116153576,0.408001382488506,0.940364164434263,0.572471974262113,0.273748850145768,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,1.01392563272577,2.3858578411533,7.78615792484217,0.283604451492204,0.443458794925128,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0.825354125820202,1.04497483268405,0,0,0.33472061276467,0,0,0.732186172644509,0,2.43042584364528,0,0,0.112611480483322,0,0,1.09921046358244,0,0,0.436094052142534,1.49091585508596,1.64619665163954,1.45650098894541,6.59724227722272,2.4826786753885,2.24271040056923,0,0.98667019366864,0.311211035399766,0.404132016209064,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0.624320153660641,0,0.298897361103602,0,0,0.140450806702248,0.204154171254893,0.368502951935304,1.13658359293342,1.18800285728205,6.67620709052104,0,0,0.168336113954066,0.500474079487857,0.277064115484183,1.31693286264251,6.12975591598039,3.60571341375832,0.453728732640084,0.358779271377724,2.13557388818567,1.48352330811693,1.80054657650641,1.23663035086127,1.28820270022815,0.37223371266318,1.85653965465393,1.55899208257918,1.51460264546469,1.56484827691909,2.10139873864455,2.84007674013291,1.30977727695932,0.339121184620975,0,0,0,0,0.265059536642971,0,0.10366105501537,0,0,1.56449532329816,10.935095949279,1.38134921352481,4.17931135228781,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0,1.16344544182,0,0,2.39344304926383,1.04007436911366,0,1.41849132023278,0.266422179016099,0.714889968290738,0.542621605391443,0,0.325736184293735,1.06617584622764,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,3.18518874668674,4.72595541865882,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50051156317903,0.542530047399471,1.24782516918484,4.81758269752337,1.57702415033935,0.585707074963566,0,6.82222512167955,6.2083842775503,0.664225598535437,1.84369168541703,1.47702144595741,0.391602314925481,0.686286847621712,0,0,0,0,0,0,2.48107807818777,0.920771839728375,12.0683840606222,1.02511319404561,4.09365799253363,2.57366273829772,0,1.07946785661859,1.24293207719189,0.410635780069046,2.07701771673448,1.62694529843943,0,1.40354529212299,0,1.83703117063371,1.0925470080403,2.62248829918848,0,0.0770153371044148,0,0,0,1.13733384070897,0.340187410553031,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0.27470839445503,0.165018999841176,0,0,0,0.676695028044854,0.154048617114644,0.307007349452259,0.137836572484531,0.751941714077915,0.290033387828457,0.426133137080504,0.356128142586949,0,0.192190067365106,0,0.10115778085555,2.32422774648643,4.40737285562896,1.3940745403212,1.84820148105653,0,0,1.48259375283136,0.572499546967965,0,0.316379424718726,1.33441135746677,0.511795582622668,1.28381696410176,0.318203247925937,2.35484592059769,1.61885211824983,1.92175920815238,1.53156123049392,0.404364963146632,1.58510321173008,4.21258456238981,1.46290121726877,1.94970791705028,3.16950440270266,0.136499911407986,1.69686518344455,4.52032466480971,0,0.66343897524122,1.31535265576129,0,0.655894752046633,0.202910376962704,1.239293992399,1.40847801266121,0,0,1.426684205925,1.41904425628239,5.69990615303693,9.22025700287725,0,0.349934720244983,0,1.34060455107157,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0.20453736500431,0,1.86623752597084,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,2.05095700524602,0,0.269272933229316,0,0,1.28236630762607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,1.22206028986725,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.442306057399416,0,0,0,0,0,0,0,0.416024019039416,0,0,0,1.57254001417827,0,0,0,0,0.484945082442097,0,0.225980740780532,0.274083849293502,0,0,0,0.0801588202515337,0.213452994739353,0.599428828746391,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0,0,2.14882720709979,0,0.558564802544508,0,0.717873024576814,0.399358000997982,1.28767814440971,0,0.0671834724867263,2.16179930125442,0,0,0,0,0,0,0,0,0.321506296930038,0,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,3.80099721227599,5.18532894720761,4.89881040164114,1.19730191562487,0,0.170388021785422,0,0,0,0,0,0,0,0.1067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| ||
|short_description=p@chr16:55519282..55519295,+ | |||
}} | }} |
Latest revision as of 09:51, 25 July 2015
Short description: | p@chr16:55519282..55519295, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55519282..55519295, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.98e-20 | 427 |
somatic stem cell | 1.60e-19 | 433 |
stem cell | 1.39e-18 | 441 |
smooth muscle cell | 1.38e-16 | 43 |
smooth muscle myoblast | 1.38e-16 | 43 |
fibroblast | 1.42e-14 | 76 |
vascular associated smooth muscle cell | 4.42e-13 | 32 |
muscle precursor cell | 1.45e-12 | 58 |
myoblast | 1.45e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.45e-12 | 58 |
muscle cell | 3.03e-11 | 55 |
mesenchymal cell | 1.84e-10 | 354 |
connective tissue cell | 2.75e-10 | 361 |
aortic smooth muscle cell | 2.01e-09 | 10 |
electrically responsive cell | 2.05e-09 | 61 |
electrically active cell | 2.05e-09 | 61 |
preadipocyte | 6.03e-08 | 12 |
motile cell | 1.22e-07 | 386 |
fat cell | 3.51e-07 | 15 |
cardiac mesenchymal cell | 4.17e-07 | 4 |
migratory trunk neural crest cell | 4.17e-07 | 4 |
skin fibroblast | 9.82e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.90e-13 | 14 |